RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 GGTA1PQ4G0N0 100 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 KCTD21Q4G0X4 260 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 TXNRD3NBQ6F5E7 133 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 NANOGP8Q6NSW7 305 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 C1orf94Q6P1W5 598 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 BLOC1S3Q6QNY0 202 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 PDSS2Q86YH6 399 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 TCEANCQ8N8B7 351 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 WDSUB1Q8N9V3 476 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 OR9K2Q8NGE7 335 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 SLC25A43Q8WUT9 341 aaPredicted RBP11.32□□□□□ -0.6
NEK9-210ENST00000557026 RRNAD1Q96FB5 475 aaKnown RBP11.32□□□□□ -0.6
NEK9-210ENST00000557026 ZNF597Q96LX8 424 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 DCSTAMPQ9H295 470 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 SYT4Q9H2B2 425 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 NANOGQ9H9S0 305 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 FAIMQ9NVQ4 179 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 TESQ9UGI8 421 aaKnown RBP11.32□□□□□ -0.6
NEK9-210ENST00000557026 AJAP1Q9UKB5 411 aaPredicted RBP11.32□□□□□ -0.6
NEK9-210ENST00000557026 SH2B3Q9UQQ2 575 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 PMS2P1A4D2B8 440 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 SCRG1O75711 98 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 AGTR1P30556 359 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 HOXD13P35453 343 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 HK3P52790 923 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 PDE7AQ13946 482 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 MTFR2Q6P444 385 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 UGT2A3Q6UWM9 527 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 CMTM1Q8IZ96 169 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 OR52E1Q8NGJ3 308 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 ZNF417Q8TAU3 575 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 ZNF442Q9H7R0 627 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 WASH6PQ9NQA3 447 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 PCTPQ9UKL6 214 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 MMP17Q9ULZ9 603 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 OAZ3Q9UMX2 235 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 CMAHPQ9Y471 501 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 ASB4Q9Y574 426 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 A0A087WUU8 490 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 FBP2O00757 339 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 TP73O15350 636 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 AK4P27144 223 aaPredicted RBP11.32□□□□□ -0.6
NEK9-210ENST00000557026 GKP32189 559 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 PCGF2P35227 344 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 XCR1P46094 333 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 PITPNBP48739 271 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 NTHL1P78549 312 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 CYCSP99999 105 aaKnown RBP11.32□□□□□ -0.6
NEK9-210ENST00000557026 TRIM61Q5EBN2 209 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 NADSYN1Q6IA69 706 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 OGFOD2Q6N063 350 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 KDELC1Q6UW63 502 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 RCBTB1Q8NDN9 531 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 SLC6A15Q9H2J7 730 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 CNOT11Q9UKZ1 510 aaKnown RBP11.32□□□□□ -0.6
NEK9-210ENST00000557026 ABCG2Q9UNQ0 655 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 RNF212BA8MTL3 300 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 OR7A10O76100 309 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 HSD17B1P14061 328 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 LCN1P31025 176 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 WSCD2Q2TBF2 565 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 RNF113BQ8IZP6 322 aaKnown RBP11.32□□□□□ -0.6
NEK9-210ENST00000557026 METTL27Q8N6F8 245 aaPredicted RBP11.32□□□□□ -0.6
NEK9-210ENST00000557026 C19orf47Q8N9M1 422 aaKnown RBP11.32□□□□□ -0.6
NEK9-210ENST00000557026 OR13C3Q8NGS6 347 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 CREB3L4Q8TEY5 395 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 SRA1Q9HD15 236 aaKnown RBP11.32□□□□□ -0.6
NEK9-210ENST00000557026 IL26Q9NPH9 171 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 ACSL6Q9UKU0 697 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 CORINQ9Y5Q5 1042 aa11.32□□□□□ -0.6
NEK9-210ENST00000557026 C4orf47A7E2U8 309 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 IGHG1P01857 330 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 IL1RNP18510 177 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 CTBSQ01459 385 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 PRDX1Q06830 199 aaKnown RBP11.31□□□□□ -0.6
NEK9-210ENST00000557026 SPEM1Q8N4L4 309 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 EID2Q8N6I1 236 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 TMEM40Q8WWA1 233 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 RAB8BQ92930 207 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 SLC41A3Q96GZ6 507 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 DNMT3BQ9UBC3 853 aaKnown RBP11.31□□□□□ -0.6
NEK9-210ENST00000557026 KCNS2Q9ULS6 477 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.31□□□□□ -0.6
NEK9-210ENST00000557026 H7C1Q1 480 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 SDHDO14521 159 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 RGS9O75916 674 aaPredicted RBP11.31□□□□□ -0.6
NEK9-210ENST00000557026 BEST1O76090 585 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 PKLRP30613 574 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 FGFBP1Q14512 234 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 DLK2Q6UY11 383 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 TMEM184AQ6ZMB5 413 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 MMP21Q8N119 569 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 DNAJC22Q8N4W6 341 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 ZNF610Q8N9Z0 462 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 LRRN4CLQ8ND94 238 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 INIPQ9NRY2 104 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 DNAJB11Q9UBS4 358 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 DOT1LQ8TEK3 1739 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 LAMB4A4D0S4 1761 aa11.31□□□□□ -0.6
NEK9-210ENST00000557026 LOC285095A0A1B0GVY8 99 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms