RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 PATE3B3GLJ2 98 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 DISC1C4P0D8 188 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 PRRT4C9JH25 899 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 LYRM1O43325 122 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 OR10H2O60403 315 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 PRSS23O95084 383 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 SLC2A2P11168 524 aaPredicted RBP5.54□□□□□ -1.52
CLK1-207ENST00000461981 UNGP13051 313 aaPredicted RBP5.54□□□□□ -1.52
CLK1-207ENST00000461981 ADRB3P13945 408 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 HOXD9P28356 352 aaPredicted RBP5.54□□□□□ -1.52
CLK1-207ENST00000461981 SEC13P55735 322 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 NFYCQ13952 458 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 SGO1Q5FBB7 561 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 MZT2BQ6NZ67 158 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 BHLHA9Q7RTU4 235 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 TIPARPQ7Z3E1 657 aaKnown RBP5.54□□□□□ -1.52
CLK1-207ENST00000461981 LDLRAD3Q86YD5 345 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 CBWD2Q8IUF1 395 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 FSTL5Q8N475 847 aaPredicted RBP5.54□□□□□ -1.52
CLK1-207ENST00000461981 MEIOBQ8N635 442 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 FAM86B1Q8N7N1 296 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 OR2L5Q8NG80 312 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 GPBAR1Q8TDU6 330 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 RXFP4Q8TDU9 374 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 SLC39A7Q92504 469 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 TSNAXQ99598 290 aaKnown RBP5.54□□□□□ -1.52
CLK1-207ENST00000461981 OMDQ99983 421 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 RERGLQ9H628 205 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 OXSMQ9NWU1 459 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 MARCH2Q9P0N8 246 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 EPHA6Q9UF33 1036 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 GIMAP2Q9UG22 337 aa5.54□□□□□ -1.52
CLK1-207ENST00000461981 LOC105369274A0A096LPK9 316 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 FXYD1O00168 92 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 ANKRD28O15084 1053 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 PROM1O43490 865 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 STX11O75558 287 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 METTL18O95568 372 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 IGHV4-34P06331 123 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 MLNP12872 115 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 CNTFP26441 200 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 STOMP27105 288 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 APEX1P27695 318 aaKnown RBP5.53□□□□□ -1.52
CLK1-207ENST00000461981 CORO1AP31146 461 aaKnown RBP5.53□□□□□ -1.52
CLK1-207ENST00000461981 GKP32189 559 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 MPIP34949 423 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 RPS19P39019 145 aaKnown RBP5.53□□□□□ -1.52
CLK1-207ENST00000461981 MMP12P39900 470 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 MAGEA2P43356 314 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 GCGRP47871 477 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 CSRP3P50461 194 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 VAMP7P51809 220 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 RAB4BP61018 213 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 RAB5BP61020 215 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 TSPAN5P62079 268 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 CHRNB3Q05901 458 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 SEMA5AQ13591 1074 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 ELAVL3Q14576 367 aaKnown RBP5.53□□□□□ -1.52
CLK1-207ENST00000461981 USP10Q14694 798 aaKnown RBP5.53□□□□□ -1.52
CLK1-207ENST00000461981 OPCMLQ14982 345 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 LRRC66Q68CR7 880 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 ZNF57Q68EA5 555 aaPredicted RBP5.53□□□□□ -1.52
CLK1-207ENST00000461981 OR4N4Q8N0Y3 316 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 LPCAT1Q8NF37 534 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 ZNF675Q8TD23 568 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 ROPN1LQ96C74 230 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 SCRN2Q96FV2 425 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 PPP3R2Q96LZ3 170 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 NSMCE2Q96MF7 247 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 ERMAPQ96PL5 475 aaPredicted RBP5.53□□□□□ -1.52
CLK1-207ENST00000461981 CYP2S1Q96SQ9 504 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 HBEGFQ99075 208 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 BARD1Q99728 777 aaKnown RBP5.53□□□□□ -1.52
CLK1-207ENST00000461981 EBNA1BP2Q99848 306 aaKnown RBP5.53□□□□□ -1.52
CLK1-207ENST00000461981 TCEAL7Q9BRU2 100 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 MRPL37Q9BZE1 423 aaKnown RBP5.53□□□□□ -1.52
CLK1-207ENST00000461981 SEBOXQ9HB31 216 aaPredicted RBP5.53□□□□□ -1.52
CLK1-207ENST00000461981 TAS2R16Q9NYV7 291 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 UBP1Q9NZI7 540 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 MED11Q9P086 117 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 PCDHB10Q9UN67 800 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 CMAHPQ9Y471 501 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 MKI67P46013 3256 aaKnown RBP5.53□□□□□ -1.52
CLK1-207ENST00000461981 UBA6A0AVT1 1052 aaPredicted RBP5.53□□□□□ -1.52
CLK1-207ENST00000461981 A8MVJ9 347 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 C1orf196B1AJZ1 125 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 TARM1B6A8C7 271 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 SDC3O75056 442 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 SLC43A1O75387 559 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 VPS26AO75436 327 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 HPRP00739 348 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 POLBP06746 335 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 FGF4P08620 206 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 CTPS1P17812 591 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 HRH2P25021 359 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 RORAP35398 523 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 MAPK8P45983 427 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 RGS6P49758 472 aa5.53□□□□□ -1.52
CLK1-207ENST00000461981 RANBP2P49792 3224 aaKnown RBP5.53□□□□□ -1.52
CLK1-207ENST00000461981 RBP2P50120 134 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms