RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 EIF3HO15372 352 aaKnown RBP eCLIP16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 TNFRSF21O75509 655 aa16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 PLAUP00749 431 aa16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 CGAP01215 116 aa16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 IFNA2P01563 188 aa16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 C2P06681 752 aa16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 CD8BP10966 210 aa16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 LOXP28300 417 aaPredicted RBP16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 SUCLG1P53597 346 aaKnown RBP16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 CORO7P57737 925 aa16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 STX5Q13190 355 aa16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 FGFBP1Q14512 234 aa16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 CLEC12BQ2HXU8 276 aa16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 ERCC6LQ2NKX8 1250 aa16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 C10orf62Q5T681 223 aaPredicted RBP16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 COMMD6Q7Z4G1 85 aa16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 WFDC8Q8IUA0 241 aa16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 CREG2Q8IUH2 290 aa16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 CCDC116Q8IYX3 515 aa16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 CENPLQ8N0S6 344 aaPredicted RBP16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 METTL4Q8N3J2 472 aa16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 GBP7Q8N8V2 638 aaPredicted RBP16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 TRPC4APQ8TEL6 797 aa16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 FBF1Q8TES7 1133 aa16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 KAT2AQ92830 837 aa16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 EFHD2Q96C19 240 aaPredicted RBP16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 SLC35A4Q96G79 324 aa16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 LRRC1Q9BTT6 524 aa16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 FAIM2Q9BWQ8 316 aa16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 STMN4Q9H169 189 aaPredicted RBP16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 ELOVL6Q9H5J4 265 aa16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 MED11Q9P086 117 aa16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 LAMP3Q9UQV4 416 aa16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 ZNF337Q9Y3M9 751 aa16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 OR10H1Q9Y4A9 318 aa16.23■□□□□ 0.19
CHCHD3-203ENST00000448878 TSPAN2O60636 221 aa16.22■□□□□ 0.19
CHCHD3-203ENST00000448878 BCAS2O75934 225 aaPredicted RBP16.22■□□□□ 0.19
CHCHD3-203ENST00000448878 PLGP00747 810 aaPredicted RBP16.22■□□□□ 0.19
CHCHD3-203ENST00000448878 GSTA2P09210 222 aa16.22■□□□□ 0.19
CHCHD3-203ENST00000448878 B3GALT5-AS1P59052 145 aa16.22■□□□□ 0.19
CHCHD3-203ENST00000448878 RPS3AP61247 264 aaKnown RBP16.22■□□□□ 0.19
CHCHD3-203ENST00000448878 UAP1Q16222 522 aaPredicted RBP16.22■□□□□ 0.19
CHCHD3-203ENST00000448878 SH2D4BQ5SQS7 431 aa16.22■□□□□ 0.19
CHCHD3-203ENST00000448878 PODNL1Q6PEZ8 512 aa16.22■□□□□ 0.19
CHCHD3-203ENST00000448878 MILR1Q7Z6M3 343 aa16.22■□□□□ 0.19
CHCHD3-203ENST00000448878 SLC44A2Q8IWA5 706 aaPredicted RBP16.22■□□□□ 0.19
CHCHD3-203ENST00000448878 PTGR2Q8N8N7 351 aaPredicted RBP16.22■□□□□ 0.19
CHCHD3-203ENST00000448878 TM4SF18Q96CE8 201 aa16.22■□□□□ 0.19
CHCHD3-203ENST00000448878 CNRIP1Q96F85 164 aaPredicted RBP16.22■□□□□ 0.19
CHCHD3-203ENST00000448878 PLPPR2Q96GM1 343 aa16.22■□□□□ 0.19
CHCHD3-203ENST00000448878 RNF122Q9H9V4 155 aa16.22■□□□□ 0.19
CHCHD3-203ENST00000448878 ZNF701Q9NV72 531 aaPredicted RBP16.22■□□□□ 0.19
CHCHD3-203ENST00000448878 UTS2RQ9UKP6 389 aa16.22■□□□□ 0.19
CHCHD3-203ENST00000448878 CHD3Q12873 2000 aaKnown RBP16.22■□□□□ 0.19
CHCHD3-203ENST00000448878 ZANQ9Y493 2812 aa16.21■□□□□ 0.19
CHCHD3-203ENST00000448878 KLF4O43474 513 aa16.21■□□□□ 0.19
CHCHD3-203ENST00000448878 THBDP07204 575 aa16.21■□□□□ 0.19
CHCHD3-203ENST00000448878 PNLIPRP2P54317 469 aa16.21■□□□□ 0.19
CHCHD3-203ENST00000448878 CLDN15P56746 228 aa16.21■□□□□ 0.19
CHCHD3-203ENST00000448878 CLDN20P56880 219 aa16.21■□□□□ 0.19
CHCHD3-203ENST00000448878 MRPS22P82650 360 aaKnown RBP16.21■□□□□ 0.19
CHCHD3-203ENST00000448878 HEPHL1Q6MZM0 1159 aa16.21■□□□□ 0.19
CHCHD3-203ENST00000448878 SH2D5Q6ZV89 423 aa16.21■□□□□ 0.19
CHCHD3-203ENST00000448878 SELENOMQ8WWX9 145 aa16.21■□□□□ 0.19
CHCHD3-203ENST00000448878 CAVIN3Q969G5 261 aa16.21■□□□□ 0.19
CHCHD3-203ENST00000448878 GFM2Q969S9 779 aaKnown RBP16.21■□□□□ 0.19
CHCHD3-203ENST00000448878 VPS11Q9H270 941 aa16.21■□□□□ 0.19
CHCHD3-203ENST00000448878 PTGES2Q9H7Z7 377 aa16.21■□□□□ 0.19
CHCHD3-203ENST00000448878 YAE1D1Q9NRH1 226 aa16.21■□□□□ 0.19
CHCHD3-203ENST00000448878 SDHAF3Q9NRP4 125 aa16.21■□□□□ 0.19
CHCHD3-203ENST00000448878 FARSBQ9NSD9 589 aaKnown RBP16.21■□□□□ 0.19
CHCHD3-203ENST00000448878 SENP1Q9P0U3 644 aa16.21■□□□□ 0.19
CHCHD3-203ENST00000448878 CLEC4AQ9UMR7 237 aa16.21■□□□□ 0.19
CHCHD3-203ENST00000448878 RAI1Q7Z5J4 1906 aaPredicted RBP16.2■□□□□ 0.18
CHCHD3-203ENST00000448878 A0A096LPK6 155 aa16.2■□□□□ 0.18
CHCHD3-203ENST00000448878 HS3ST1O14792 307 aa16.2■□□□□ 0.18
CHCHD3-203ENST00000448878 GMFGO60234 142 aa16.2■□□□□ 0.18
CHCHD3-203ENST00000448878 KLHL2O95198 593 aa16.2■□□□□ 0.18
CHCHD3-203ENST00000448878 CT45A8P0DMV1 189 aa16.2■□□□□ 0.18
CHCHD3-203ENST00000448878 CT45A9P0DMV2 189 aa16.2■□□□□ 0.18
CHCHD3-203ENST00000448878 STX2P32856 288 aa16.2■□□□□ 0.18
CHCHD3-203ENST00000448878 CTBP2P56545 445 aa16.2■□□□□ 0.18
CHCHD3-203ENST00000448878 CT45A2Q5DJT8 189 aa16.2■□□□□ 0.18
CHCHD3-203ENST00000448878 FAM214BQ7L5A3 538 aa16.2■□□□□ 0.18
CHCHD3-203ENST00000448878 PHC2Q8IXK0 858 aa16.2■□□□□ 0.18
CHCHD3-203ENST00000448878 ZNF611Q8N823 705 aa16.2■□□□□ 0.18
CHCHD3-203ENST00000448878 OR4F6Q8NGB9 312 aa16.2■□□□□ 0.18
CHCHD3-203ENST00000448878 OR4N2Q8NGD1 307 aa16.2■□□□□ 0.18
CHCHD3-203ENST00000448878 OR9A2Q8NGT5 310 aa16.2■□□□□ 0.18
CHCHD3-203ENST00000448878 AKAP1Q92667 903 aaKnown RBP eCLIP16.2■□□□□ 0.18
CHCHD3-203ENST00000448878 EXOSC8Q96B26 276 aaKnown RBP16.2■□□□□ 0.18
CHCHD3-203ENST00000448878 TRMT61AQ96FX7 289 aaKnown RBP16.2■□□□□ 0.18
CHCHD3-203ENST00000448878 NSUN5Q96P11 429 aaKnown RBP16.2■□□□□ 0.18
CHCHD3-203ENST00000448878 BTBD9Q96Q07 612 aa16.2■□□□□ 0.18
CHCHD3-203ENST00000448878 FOLH1BQ9HBA9 442 aa16.2■□□□□ 0.18
CHCHD3-203ENST00000448878 WHRNQ9P202 907 aa16.2■□□□□ 0.18
CHCHD3-203ENST00000448878 EMC9Q9Y3B6 208 aa16.2■□□□□ 0.18
CHCHD3-203ENST00000448878 ZNF175Q9Y473 711 aa16.2■□□□□ 0.18
CHCHD3-203ENST00000448878 SAR1BQ9Y6B6 198 aa16.2■□□□□ 0.18
CHCHD3-203ENST00000448878 TLN2Q9Y4G6 2542 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms