RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 ANXA8P13928 327 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 CPMP14384 443 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 CRHBPP24387 322 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 HOXD11P31277 338 aaPredicted RBP14.09□□□□□ -0.15
SCAF11-204ENST00000395454 POLR2IP36954 125 aaKnown RBP14.09□□□□□ -0.15
SCAF11-204ENST00000395454 XKP51811 444 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 GABARAPL2P60520 117 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 CD47Q08722 323 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 NDUFA9Q16795 377 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 MICAQ29983 383 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 FHL5Q5TD97 284 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 PRSS41Q7RTY9 318 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 CA13Q8N1Q1 262 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 SETD9Q8NE22 299 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 NUP43Q8NFH3 380 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 GIPC3Q8TF64 312 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 CLIP3Q96DZ5 547 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 SPATA5L1Q9BVQ7 753 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 ACTRT3Q9BYD9 372 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 ULBP3Q9BZM4 244 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 KRT84Q9NSB2 600 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 NDOR1Q9UHB4 597 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 SH3GLB1Q9Y371 365 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 NAALAD2Q9Y3Q0 740 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 TESMINQ9Y4I5 508 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 SPACA6W5XKT8 324 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 AKAP13Q12802 2813 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 A0A087WV62 115 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 FFAR1O14842 300 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 SEC24DO94855 1032 aaPredicted RBP14.09□□□□□ -0.15
SCAF11-204ENST00000395454 MED26O95402 600 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 NR2F1P10589 423 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 CLK3P49761 638 aaKnown RBP14.09□□□□□ -0.15
SCAF11-204ENST00000395454 CDH15P55291 814 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 SPIBQ01892 262 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 LTB4RQ15722 352 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 CTU2Q2VPK5 515 aaKnown RBP14.09□□□□□ -0.15
SCAF11-204ENST00000395454 ZNF628Q5EBL2 1059 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 C6orf141Q5SZD1 244 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 GARNL3Q5VVW2 1013 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 MFSD12Q6NUT3 480 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 NIPAL1Q6NVV3 410 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 METTL27Q8N6F8 245 aaPredicted RBP14.09□□□□□ -0.15
SCAF11-204ENST00000395454 ATG16L2Q8NAA4 619 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 OR7G2Q8NG99 324 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 ZNF675Q8TD23 568 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 XAGE5Q8WWM1 108 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 PROX1Q92786 737 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 TANKQ92844 425 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 DGCR14Q96DF8 476 aaKnown RBP14.09□□□□□ -0.15
SCAF11-204ENST00000395454 COL21A1Q96P44 957 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 TRNT1Q96Q11 434 aaKnown RBP14.09□□□□□ -0.15
SCAF11-204ENST00000395454 OR7D2Q96RA2 312 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 ING2Q9H160 280 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 POLR1BQ9H9Y6 1135 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 TRPC4Q9UBN4 977 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 SRPK3Q9UPE1 567 aa14.09□□□□□ -0.15
SCAF11-204ENST00000395454 FRYQ5TBA9 3013 aa14.08□□□□□ -0.15
SCAF11-204ENST00000395454 LAMA5O15230 3695 aa14.08□□□□□ -0.15
SCAF11-204ENST00000395454 C9orf172C9J069 976 aa14.08□□□□□ -0.16
SCAF11-204ENST00000395454 SEMA7AO75326 666 aa14.08□□□□□ -0.16
SCAF11-204ENST00000395454 AGR2O95994 175 aa14.08□□□□□ -0.16
SCAF11-204ENST00000395454 SPINK2P20155 84 aa14.08□□□□□ -0.16
SCAF11-204ENST00000395454 ELK4P28324 431 aa14.08□□□□□ -0.16
SCAF11-204ENST00000395454 PTGER1P34995 402 aa14.08□□□□□ -0.16
SCAF11-204ENST00000395454 RAB38P57729 211 aa14.08□□□□□ -0.16
SCAF11-204ENST00000395454 CXCR4P61073 352 aa14.08□□□□□ -0.16
SCAF11-204ENST00000395454 ZNF770Q6IQ21 691 aaPredicted RBP14.08□□□□□ -0.16
SCAF11-204ENST00000395454 TCTN3Q6NUS6 607 aa14.08□□□□□ -0.16
SCAF11-204ENST00000395454 CDC73Q6P1J9 531 aa14.08□□□□□ -0.16
SCAF11-204ENST00000395454 ZNF773Q6PK81 442 aa14.08□□□□□ -0.16
SCAF11-204ENST00000395454 FAM111BQ6SJ93 734 aa14.08□□□□□ -0.16
SCAF11-204ENST00000395454 TSPYL5Q86VY4 417 aaPredicted RBP14.08□□□□□ -0.16
SCAF11-204ENST00000395454 PARP8Q8N3A8 854 aa14.08□□□□□ -0.16
SCAF11-204ENST00000395454 SLC38A9Q8NBW4 561 aa14.08□□□□□ -0.16
SCAF11-204ENST00000395454 OR10G2Q8NGC3 310 aa14.08□□□□□ -0.16
SCAF11-204ENST00000395454 C16orf58Q96GQ5 468 aa14.08□□□□□ -0.16
SCAF11-204ENST00000395454 HRASLS5Q96KN8 279 aa14.08□□□□□ -0.16
SCAF11-204ENST00000395454 ZPBPQ9BS86 351 aa14.08□□□□□ -0.16
SCAF11-204ENST00000395454 FUZQ9BT04 418 aa14.08□□□□□ -0.16
SCAF11-204ENST00000395454 DDA1Q9BW61 102 aa14.08□□□□□ -0.16
SCAF11-204ENST00000395454 ANKHQ9HCJ1 492 aa14.08□□□□□ -0.16
SCAF11-204ENST00000395454 GIN1Q9NXP7 522 aa14.08□□□□□ -0.16
SCAF11-204ENST00000395454 CALML5Q9NZT1 146 aa14.08□□□□□ -0.16
SCAF11-204ENST00000395454 KIF17Q9P2E2 1029 aa14.08□□□□□ -0.16
SCAF11-204ENST00000395454 SEC14L3Q9UDX4 400 aa14.08□□□□□ -0.16
SCAF11-204ENST00000395454 KLK13Q9UKR3 277 aa14.08□□□□□ -0.16
SCAF11-204ENST00000395454 ZFHX4Q86UP3 3567 aa14.08□□□□□ -0.16
SCAF11-204ENST00000395454 A0A0A6YYC8 382 aaPredicted RBP14.07□□□□□ -0.16
SCAF11-204ENST00000395454 DUXAA6NLW8 204 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 I3L1I5 382 aaPredicted RBP14.07□□□□□ -0.16
SCAF11-204ENST00000395454 SYT5O00445 386 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 PLOD3O60568 738 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 CPNE3O75131 537 aaKnown RBP14.07□□□□□ -0.16
SCAF11-204ENST00000395454 OR6B1O95007 311 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 GPR75O95800 540 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 CCDC159P0C7I6 412 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 PORP16435 677 aaPredicted RBP14.07□□□□□ -0.16
SCAF11-204ENST00000395454 ZNF28P17035 718 aa14.07□□□□□ -0.16
SCAF11-204ENST00000395454 CBLP22681 906 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 182.1 ms