RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 TMEM240Q5SV17 173 aa4.6□□□□□ -1.67
SCN3A-202ENST00000360093 PRAMEF17Q5VTA0 474 aa4.6□□□□□ -1.67
SCN3A-202ENST00000360093 SLC25A25Q6KCM7 469 aa4.6□□□□□ -1.67
SCN3A-202ENST00000360093 FIGNL1Q6PIW4 674 aa4.6□□□□□ -1.67
SCN3A-202ENST00000360093 XKRXQ6PP77 449 aa4.6□□□□□ -1.67
SCN3A-202ENST00000360093 UEVLDQ8IX04 471 aa4.6□□□□□ -1.67
SCN3A-202ENST00000360093 PRRC1Q96M27 445 aa4.6□□□□□ -1.67
SCN3A-202ENST00000360093 PCDHGA10Q9Y5H3 936 aa4.6□□□□□ -1.67
SCN3A-202ENST00000360093 A0A1B0GTW7 788 aa4.6□□□□□ -1.67
SCN3A-202ENST00000360093 EIF1AYO14602 144 aaKnown RBP4.6□□□□□ -1.67
SCN3A-202ENST00000360093 AZGP1P25311 298 aaKnown RBP4.6□□□□□ -1.67
SCN3A-202ENST00000360093 AK4P27144 223 aaPredicted RBP4.6□□□□□ -1.67
SCN3A-202ENST00000360093 RPE65Q16518 533 aa4.6□□□□□ -1.67
SCN3A-202ENST00000360093 ZNF181Q2M3W8 571 aa4.6□□□□□ -1.67
SCN3A-202ENST00000360093 C1orf189Q5VU69 101 aa4.6□□□□□ -1.67
SCN3A-202ENST00000360093 PTCRAQ6ISU1 281 aaPredicted RBP4.6□□□□□ -1.67
SCN3A-202ENST00000360093 ULK3Q6PHR2 472 aa4.6□□□□□ -1.67
SCN3A-202ENST00000360093 TMEM173Q86WV6 379 aaPredicted RBP4.6□□□□□ -1.67
SCN3A-202ENST00000360093 OR10Q1Q8NGQ4 319 aa4.6□□□□□ -1.67
SCN3A-202ENST00000360093 LRR1Q96L50 414 aa4.6□□□□□ -1.67
SCN3A-202ENST00000360093 ASB16Q96NS5 453 aa4.6□□□□□ -1.67
SCN3A-202ENST00000360093 METTL8Q9H825 291 aaKnown RBP4.6□□□□□ -1.67
SCN3A-202ENST00000360093 TRPV4Q9HBA0 871 aa4.6□□□□□ -1.67
SCN3A-202ENST00000360093 RIMS3Q9UJD0 308 aa4.6□□□□□ -1.67
SCN3A-202ENST00000360093 KCNIP3Q9Y2W7 256 aa4.6□□□□□ -1.67
SCN3A-202ENST00000360093 ACTL7AQ9Y615 435 aa4.6□□□□□ -1.67
SCN3A-202ENST00000360093 FER1L6Q2WGJ9 1857 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 TRBV2A0A0J9YWF9 115 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 NOS1APO75052 506 aaPredicted RBP4.59□□□□□ -1.67
SCN3A-202ENST00000360093 HOXB9P17482 250 aaPredicted RBP4.59□□□□□ -1.67
SCN3A-202ENST00000360093 CCNOP22674 350 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 CPOXP36551 454 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 SLC9A3P48764 834 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 HK3P52790 923 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 RACK1P63244 317 aaKnown RBP4.59□□□□□ -1.67
SCN3A-202ENST00000360093 NKX3-2P78367 333 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 GPLD1P80108 840 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 E2F1Q01094 437 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 GALK2Q01415 458 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 CEACAM7Q14002 265 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 ZNF77Q15935 545 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 SGCAQ16586 387 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 ZNF789Q5FWF6 425 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 ASRGL1Q7L266 308 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 AGBL5Q8NDL9 886 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 OR51A7Q8NH64 312 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 TMEM121BQ9BXQ6 578 aaPredicted RBP4.59□□□□□ -1.67
SCN3A-202ENST00000360093 SEMA6CQ9H3T2 930 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 EURLQ9NYK6 297 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 ABCD2Q9UBJ2 740 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 XIRP1Q702N8 1843 aaKnown RBP4.59□□□□□ -1.67
SCN3A-202ENST00000360093 CIB4A0PJX0 185 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 C5orf51A6NDU8 294 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 FANCGO15287 622 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 CDC40O60508 579 aaKnown RBP eCLIP4.59□□□□□ -1.67
SCN3A-202ENST00000360093 SDC3O75056 442 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 RAD51DO75771 328 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 SNAP29O95721 258 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 GKN3PP0CG01 181 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 THBS2P35442 1172 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 GMPRP36959 345 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 MC3RP41968 323 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 HERV-K104P61576 105 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 BTBD16Q32M84 506 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 DCAF12Q5T6F0 453 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 RNF113BQ8IZP6 322 aaKnown RBP4.59□□□□□ -1.67
SCN3A-202ENST00000360093 C19orf47Q8N9M1 422 aaKnown RBP4.59□□□□□ -1.67
SCN3A-202ENST00000360093 CREB3L4Q8TEY5 395 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 TAMM41Q96BW9 452 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 HSPBAP1Q96EW2 488 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 PGAM5Q96HS1 289 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 LYSMD1Q96S90 227 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 FEVQ99581 238 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 WDR77Q9BQA1 342 aaPredicted RBP4.59□□□□□ -1.67
SCN3A-202ENST00000360093 KCNK12Q9HB15 430 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 UBQLN4Q9NRR5 601 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 INPP5EQ9NRR6 644 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 FKBP14Q9NWM8 211 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 TBC1D24Q9ULP9 559 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 EME2A4GXA9 379 aaPredicted RBP4.59□□□□□ -1.67
SCN3A-202ENST00000360093 EFCAB7A8K855 629 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 NME4O00746 187 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 IRF2P14316 349 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 CELP19835 753 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 STOMP27105 288 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 EIF1AXP47813 144 aaKnown RBP4.59□□□□□ -1.67
SCN3A-202ENST00000360093 UBE2NP61088 152 aaKnown RBP4.59□□□□□ -1.67
SCN3A-202ENST00000360093 TLE3Q04726 772 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 DPTQ07507 201 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 PPP1R8Q12972 351 aaKnown RBP4.59□□□□□ -1.67
SCN3A-202ENST00000360093 GPR139Q6DWJ6 353 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 TRNP1Q6NT89 227 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 OPN5Q6U736 354 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 FAM83HQ6ZRV2 1179 aaPredicted RBP4.59□□□□□ -1.67
SCN3A-202ENST00000360093 TRIM46Q7Z4K8 759 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 ZER1Q7Z7L7 766 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 ZBTB46Q86UZ6 589 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 NAGSQ8N159 534 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 SLC43A2Q8N370 569 aa4.59□□□□□ -1.67
SCN3A-202ENST00000360093 C12orf43Q96C57 262 aaKnown RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms