RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 ACP5P13686 325 aa18.64■□□□□ 0.57
CRLF3-201ENST00000324238 MAP2K3P46734 347 aa18.64■□□□□ 0.57
CRLF3-201ENST00000324238 ARHGEF6Q15052 776 aa18.64■□□□□ 0.57
CRLF3-201ENST00000324238 ZNF311Q5JNZ3 666 aa18.64■□□□□ 0.57
CRLF3-201ENST00000324238 HSDL2Q6YN16 418 aa18.64■□□□□ 0.57
CRLF3-201ENST00000324238 DCUN1D3Q8IWE4 304 aa18.64■□□□□ 0.57
CRLF3-201ENST00000324238 NEIL3Q8TAT5 605 aa18.64■□□□□ 0.57
CRLF3-201ENST00000324238 SETD7Q8WTS6 366 aaKnown RBP18.64■□□□□ 0.57
CRLF3-201ENST00000324238 SPRYD4Q8WW59 207 aaPredicted RBP18.64■□□□□ 0.57
CRLF3-201ENST00000324238 CNRIP1Q96F85 164 aaPredicted RBP18.64■□□□□ 0.57
CRLF3-201ENST00000324238 MCUBQ9NWR8 336 aa18.64■□□□□ 0.57
CRLF3-201ENST00000324238 PRODHO43272 600 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 PAK4O96013 591 aaPredicted RBP18.63■□□□□ 0.57
CRLF3-201ENST00000324238 YES1P07947 543 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 HTR2BP41595 481 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 SOX9P48436 509 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 CSTF1Q05048 431 aaKnown RBP18.63■□□□□ 0.57
CRLF3-201ENST00000324238 ZNF234Q14588 700 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 FAM46CQ5VWP2 391 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 OR4C11Q6IEV9 310 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 C1orf94Q6P1W5 598 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 QSOX2Q6ZRP7 698 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 MCOLN1Q9GZU1 580 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 DKK3Q9UBP4 350 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 A0A1W2PPV9 198 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 A0A1W2PR48 441 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 LGI1O95970 557 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 MC3RP41968 323 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 SLC1A3P43003 542 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 CAMK1Q14012 370 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 LRRTM4Q86VH4 590 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 CLDN22Q8N7P3 220 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 OR51G2Q8NGK0 314 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 FGF11Q92914 225 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 SECISBP2Q96T21 854 aaKnown RBP18.63■□□□□ 0.57
CRLF3-201ENST00000324238 GDF15Q99988 308 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 IRF2BPLQ9H1B7 796 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 DDX31Q9H8H2 851 aaKnown RBP18.63■□□□□ 0.57
CRLF3-201ENST00000324238 A0A0G2JMP0 313 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 A0A0X1KG70 313 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 LANCL1O43813 399 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 PRNPP04156 253 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 AHRP35869 848 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 BNC1Q01954 994 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 WSCD2Q2TBF2 565 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 IDNKQ5T6J7 187 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 FCRLBQ6BAA4 426 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 NR2C2APQ86WQ0 139 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 NRMQ8IXM6 262 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 NRSN1Q8IZ57 195 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 GDPD1Q8N9F7 314 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 OR9A2Q8NGT5 310 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 OR8D1Q8WZ84 308 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 POLMQ9NP87 494 aaPredicted RBP18.63■□□□□ 0.57
CRLF3-201ENST00000324238 DEC1Q9P2X7 70 aa18.63■□□□□ 0.57
CRLF3-201ENST00000324238 NFKBIL1Q9UBC1 381 aaPredicted RBP18.63■□□□□ 0.57
CRLF3-201ENST00000324238 TRBV23OR9-2A0A075B6M9 112 aa18.62■□□□□ 0.57
CRLF3-201ENST00000324238 PLOD3O60568 738 aa18.62■□□□□ 0.57
CRLF3-201ENST00000324238 UBXN7O94888 489 aa18.62■□□□□ 0.57
CRLF3-201ENST00000324238 INPP1P49441 399 aa18.62■□□□□ 0.57
CRLF3-201ENST00000324238 SMIM11AP58511 58 aa18.62■□□□□ 0.57
CRLF3-201ENST00000324238 CSNK1G2P78368 415 aa18.62■□□□□ 0.57
CRLF3-201ENST00000324238 KLHL22Q53GT1 634 aa18.62■□□□□ 0.57
CRLF3-201ENST00000324238 SLC36A4Q6YBV0 504 aa18.62■□□□□ 0.57
CRLF3-201ENST00000324238 TMEM255BQ8WV15 326 aa18.62■□□□□ 0.57
CRLF3-201ENST00000324238 DPEP2Q9H4A9 486 aa18.62■□□□□ 0.57
CRLF3-201ENST00000324238 GSTK1Q9Y2Q3 226 aa18.62■□□□□ 0.57
CRLF3-201ENST00000324238 GTPBP1O00178 669 aaKnown RBP18.62■□□□□ 0.57
CRLF3-201ENST00000324238 ALAS2P22557 587 aa18.62■□□□□ 0.57
CRLF3-201ENST00000324238 CERS1P27544 350 aa18.62■□□□□ 0.57
CRLF3-201ENST00000324238 EVI2BP34910 448 aa18.62■□□□□ 0.57
CRLF3-201ENST00000324238 EFNB1P98172 346 aa18.62■□□□□ 0.57
CRLF3-201ENST00000324238 C3orf38Q5JPI3 329 aa18.62■□□□□ 0.57
CRLF3-201ENST00000324238 OR4N5Q8IXE1 308 aa18.62■□□□□ 0.57
CRLF3-201ENST00000324238 OR4M2Q8NGB6 313 aa18.62■□□□□ 0.57
CRLF3-201ENST00000324238 CXorf40AQ8TE69 158 aa18.62■□□□□ 0.57
CRLF3-201ENST00000324238 C12orf66Q96MD2 445 aa18.62■□□□□ 0.57
CRLF3-201ENST00000324238 ATF6BQ99941 703 aa18.62■□□□□ 0.57
CRLF3-201ENST00000324238 CHST2Q9Y4C5 530 aa18.62■□□□□ 0.57
CRLF3-201ENST00000324238 SIRT4Q9Y6E7 314 aaPredicted RBP18.62■□□□□ 0.57
CRLF3-201ENST00000324238 GABRPO00591 440 aa18.61■□□□□ 0.57
CRLF3-201ENST00000324238 PAHP00439 452 aa18.61■□□□□ 0.57
CRLF3-201ENST00000324238 FGBP02675 491 aa18.61■□□□□ 0.57
CRLF3-201ENST00000324238 MAT2AP31153 395 aaKnown RBP18.61■□□□□ 0.57
CRLF3-201ENST00000324238 BTBD16Q32M84 506 aa18.61■□□□□ 0.57
CRLF3-201ENST00000324238 MTFR2Q6P444 385 aa18.61■□□□□ 0.57
CRLF3-201ENST00000324238 DNAJC5GQ8N7S2 189 aa18.61■□□□□ 0.57
CRLF3-201ENST00000324238 BBS10Q8TAM1 723 aa18.61■□□□□ 0.57
CRLF3-201ENST00000324238 SNAPC3Q92966 411 aa18.61■□□□□ 0.57
CRLF3-201ENST00000324238 PRRC1Q96M27 445 aa18.61■□□□□ 0.57
CRLF3-201ENST00000324238 ARHGAP9Q9BRR9 750 aa18.61■□□□□ 0.57
CRLF3-201ENST00000324238 HDHD2Q9H0R4 259 aa18.61■□□□□ 0.57
CRLF3-201ENST00000324238 PPIL3Q9H2H8 161 aaKnown RBP18.61■□□□□ 0.57
CRLF3-201ENST00000324238 RHBGQ9H310 441 aa18.61■□□□□ 0.57
CRLF3-201ENST00000324238 EPHX3Q9H6B9 360 aa18.61■□□□□ 0.57
CRLF3-201ENST00000324238 MBNL1Q9NR56 388 aaKnown RBP18.61■□□□□ 0.57
CRLF3-201ENST00000324238 SLC13A4Q9UKG4 626 aa18.61■□□□□ 0.57
CRLF3-201ENST00000324238 LAMA1P25391 3075 aa18.61■□□□□ 0.57
CRLF3-201ENST00000324238 MEN1O00255 615 aa18.61■□□□□ 0.57
CRLF3-201ENST00000324238 TBXA2RP21731 343 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms