RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 C16orf89Q6UX73 402 aa18.36■□□□□ 0.53
PDLIM2-221ENST00000622702 ANGPTL8Q6UXH0 198 aa18.36■□□□□ 0.53
PDLIM2-221ENST00000622702 PGAM4Q8N0Y7 254 aa18.36■□□□□ 0.53
PDLIM2-221ENST00000622702 LGI4Q8N135 537 aa18.36■□□□□ 0.53
PDLIM2-221ENST00000622702 SLC16A11Q8NCK7 471 aa18.36■□□□□ 0.53
PDLIM2-221ENST00000622702 PSMF1Q92530 271 aa18.36■□□□□ 0.53
PDLIM2-221ENST00000622702 TP53INP1Q96A56 240 aa18.36■□□□□ 0.53
PDLIM2-221ENST00000622702 ABHD17AQ96GS6 310 aa18.36■□□□□ 0.53
PDLIM2-221ENST00000622702 GAL3ST4Q96RP7 486 aa18.36■□□□□ 0.53
PDLIM2-221ENST00000622702 STACQ99469 402 aa18.36■□□□□ 0.53
PDLIM2-221ENST00000622702 DUSP22Q9NRW4 184 aa18.36■□□□□ 0.53
PDLIM2-221ENST00000622702 TUBD1Q9UJT1 453 aa18.36■□□□□ 0.53
PDLIM2-221ENST00000622702 TMEM200CA6NKL6 621 aa18.35■□□□□ 0.53
PDLIM2-221ENST00000622702 DUXAA6NLW8 204 aa18.35■□□□□ 0.53
PDLIM2-221ENST00000622702 MKRN2OSH3BPM6 223 aa18.35■□□□□ 0.53
PDLIM2-221ENST00000622702 CT45A8P0DMV1 189 aa18.35■□□□□ 0.53
PDLIM2-221ENST00000622702 CT45A9P0DMV2 189 aa18.35■□□□□ 0.53
PDLIM2-221ENST00000622702 ACP2P11117 423 aa18.35■□□□□ 0.53
PDLIM2-221ENST00000622702 SFTPCP11686 197 aa18.35■□□□□ 0.53
PDLIM2-221ENST00000622702 BMP2P12643 396 aa18.35■□□□□ 0.53
PDLIM2-221ENST00000622702 KHKP50053 298 aa18.35■□□□□ 0.53
PDLIM2-221ENST00000622702 SLC25A3Q00325 362 aa18.35■□□□□ 0.53
PDLIM2-221ENST00000622702 SELPLGQ14242 412 aa18.35■□□□□ 0.53
PDLIM2-221ENST00000622702 CT45A2Q5DJT8 189 aa18.35■□□□□ 0.53
PDLIM2-221ENST00000622702 RABL3Q5HYI8 236 aa18.35■□□□□ 0.53
PDLIM2-221ENST00000622702 COX20Q5RI15 118 aa18.35■□□□□ 0.53
PDLIM2-221ENST00000622702 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.35■□□□□ 0.533e-8■■■■■ 44.2
PDLIM2-221ENST00000622702 RINLQ6ZS11 566 aa18.35■□□□□ 0.53
PDLIM2-221ENST00000622702 CCDC121Q6ZUS5 278 aa18.35■□□□□ 0.53
PDLIM2-221ENST00000622702 SLC5A8Q8N695 610 aa18.35■□□□□ 0.53
PDLIM2-221ENST00000622702 ADAMTS15Q8TE58 950 aa18.35■□□□□ 0.53
PDLIM2-221ENST00000622702 THOC3Q96J01 351 aaKnown RBP18.35■□□□□ 0.53
PDLIM2-221ENST00000622702 LCORQ96JN0 433 aaPredicted RBP18.35■□□□□ 0.53
PDLIM2-221ENST00000622702 OR7D2Q96RA2 312 aa18.35■□□□□ 0.53
PDLIM2-221ENST00000622702 YIPF4Q9BSR8 244 aa18.35■□□□□ 0.53
PDLIM2-221ENST00000622702 THUMPD3Q9BV44 507 aaKnown RBP18.35■□□□□ 0.53
PDLIM2-221ENST00000622702 TRIM8Q9BZR9 551 aa18.35■□□□□ 0.53
PDLIM2-221ENST00000622702 LHPPQ9H008 270 aa18.35■□□□□ 0.53
PDLIM2-221ENST00000622702 OR51I1Q9H343 314 aa18.35■□□□□ 0.53
PDLIM2-221ENST00000622702 PIGUQ9H490 435 aa18.35■□□□□ 0.53
PDLIM2-221ENST00000622702 KAT8Q9H7Z6 458 aaKnown RBP18.35■□□□□ 0.53
PDLIM2-221ENST00000622702 TAS2R1Q9NYW7 299 aa18.35■□□□□ 0.53
PDLIM2-221ENST00000622702 MYOTQ9UBF9 498 aa18.35■□□□□ 0.53
PDLIM2-221ENST00000622702 AP3M1Q9Y2T2 418 aa18.35■□□□□ 0.53
PDLIM2-221ENST00000622702 FRG2CA6NGY1 282 aa18.34■□□□□ 0.53
PDLIM2-221ENST00000622702 AGR2O95994 175 aa18.34■□□□□ 0.53
PDLIM2-221ENST00000622702 ALOX5P09917 674 aa18.34■□□□□ 0.53
PDLIM2-221ENST00000622702 CORO7P57737 925 aa18.34■□□□□ 0.53
PDLIM2-221ENST00000622702 PSPHP78330 225 aa18.34■□□□□ 0.53
PDLIM2-221ENST00000622702 DUSP5Q16690 384 aa18.34■□□□□ 0.53
PDLIM2-221ENST00000622702 TNFAIP8L2Q6P589 184 aaPredicted RBP18.34■□□□□ 0.53
PDLIM2-221ENST00000622702 NPSR1Q6W5P4 371 aa18.34■□□□□ 0.53
PDLIM2-221ENST00000622702 WDR53Q7Z5U6 358 aaPredicted RBP18.34■□□□□ 0.53
PDLIM2-221ENST00000622702 SLC15A3Q8IY34 581 aa18.34■□□□□ 0.53
PDLIM2-221ENST00000622702 GALNT16Q8N428 558 aa18.34■□□□□ 0.53
PDLIM2-221ENST00000622702 HORMAD2Q8N7B1 307 aa18.34■□□□□ 0.53
PDLIM2-221ENST00000622702 BRIX1Q8TDN6 353 aaKnown RBP18.34■□□□□ 0.53
PDLIM2-221ENST00000622702 SLC9A6Q92581 669 aa18.34■□□□□ 0.53
PDLIM2-221ENST00000622702 JADE3Q92613 823 aa18.34■□□□□ 0.53
PDLIM2-221ENST00000622702 TMEM125Q96AQ2 219 aa18.34■□□□□ 0.53
PDLIM2-221ENST00000622702 SLC7A6OSQ96CW6 309 aaPredicted RBP18.34■□□□□ 0.53
PDLIM2-221ENST00000622702 NXF5Q9H1B4 397 aaKnown RBP18.34■□□□□ 0.53
PDLIM2-221ENST00000622702 SPAG4Q9NPE6 437 aa18.34■□□□□ 0.53
PDLIM2-221ENST00000622702 RYDENQ9NUL5 291 aaKnown RBP18.34■□□□□ 0.53
PDLIM2-221ENST00000622702 ABCD2Q9UBJ2 740 aa18.34■□□□□ 0.53
PDLIM2-221ENST00000622702 HMGN4O00479 90 aa18.33■□□□□ 0.53
PDLIM2-221ENST00000622702 TO15178 435 aa18.33■□□□□ 0.53
PDLIM2-221ENST00000622702 ACOX3O15254 700 aa18.33■□□□□ 0.53
PDLIM2-221ENST00000622702 ITGA3P26006 1051 aa18.33■□□□□ 0.53
PDLIM2-221ENST00000622702 CRATP43155 626 aa18.33■□□□□ 0.53
PDLIM2-221ENST00000622702 RASSF2P50749 326 aa18.33■□□□□ 0.53
PDLIM2-221ENST00000622702 SLC7A2P52569 658 aa18.33■□□□□ 0.53
PDLIM2-221ENST00000622702 CASP9P55211 416 aa18.33■□□□□ 0.53
PDLIM2-221ENST00000622702 RAPSNQ13702 412 aa18.33■□□□□ 0.53
PDLIM2-221ENST00000622702 TCTN3Q6NUS6 607 aa18.33■□□□□ 0.53
PDLIM2-221ENST00000622702 C10orf111Q8N326 155 aa18.33■□□□□ 0.53
PDLIM2-221ENST00000622702 FDCSPQ8NFU4 85 aa18.33■□□□□ 0.53
PDLIM2-221ENST00000622702 OR5D16Q8NGK9 328 aa18.33■□□□□ 0.53
PDLIM2-221ENST00000622702 C9orf43Q8TAL5 461 aaPredicted RBP18.33■□□□□ 0.53
PDLIM2-221ENST00000622702 FBXO30Q8TB52 745 aa18.33■□□□□ 0.53
PDLIM2-221ENST00000622702 SLC35A4Q96G79 324 aa18.33■□□□□ 0.53
PDLIM2-221ENST00000622702 Q9N2J8 555 aa18.33■□□□□ 0.53
PDLIM2-221ENST00000622702 CMTM6Q9NX76 183 aa18.33■□□□□ 0.53
PDLIM2-221ENST00000622702 THUMPD1Q9NXG2 353 aaKnown RBP18.33■□□□□ 0.53
PDLIM2-221ENST00000622702 BSNQ9UPA5 3926 aa18.33■□□□□ 0.52
PDLIM2-221ENST00000622702 TNFRSF21O75509 655 aa18.33■□□□□ 0.52
PDLIM2-221ENST00000622702 CEACAM4O75871 244 aa18.33■□□□□ 0.52
PDLIM2-221ENST00000622702 OR12D1P0DN82 309 aa18.33■□□□□ 0.52
PDLIM2-221ENST00000622702 ETFAP13804 333 aa18.33■□□□□ 0.52
PDLIM2-221ENST00000622702 GABRA3P34903 492 aa18.33■□□□□ 0.52
PDLIM2-221ENST00000622702 TRHRP34981 398 aaPredicted RBP18.33■□□□□ 0.52
PDLIM2-221ENST00000622702 NR0B1P51843 470 aaKnown RBP18.33■□□□□ 0.52
PDLIM2-221ENST00000622702 CYP27C1Q4G0S4 372 aa18.33■□□□□ 0.52
PDLIM2-221ENST00000622702 IRAK1BP1Q5VVH5 260 aa18.33■□□□□ 0.52
PDLIM2-221ENST00000622702 SERPINA11Q86U17 422 aa18.33■□□□□ 0.52
PDLIM2-221ENST00000622702 RPS19BP1Q86WX3 136 aaKnown RBP18.33■□□□□ 0.52
PDLIM2-221ENST00000622702 SLC44A2Q8IWA5 706 aaPredicted RBP18.33■□□□□ 0.52
PDLIM2-221ENST00000622702 DEFB107AQ8IZN7 70 aa18.33■□□□□ 0.52
PDLIM2-221ENST00000622702 GPR151Q8TDV0 419 aa18.33■□□□□ 0.52
PDLIM2-221ENST00000622702 THAP3Q8WTV1 239 aaPredicted RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms