RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 FAM181AQ8N9Y4 354 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 TTLQ8NG68 377 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 OR8K5Q8NH50 307 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 DNAJA4Q8WW22 397 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 HRASLS5Q96KN8 279 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 KCNS3Q9BQ31 491 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 DDX31Q9H8H2 851 aaKnown RBP16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 KRT84Q9NSB2 600 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 KIF17Q9P2E2 1029 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 NDRG2Q9UN36 371 aaKnown RBP16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 HEBP2Q9Y5Z4 205 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 KNL1Q8NG31 2342 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 TNRC18O15417 2968 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 MYO15AQ9UKN7 3530 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 A0A1W2PQ09 198 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 LRRC72A6NJI9 287 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 ADORA3P0DMS8 318 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 CHMP24386 653 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 TEKQ02763 1124 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 RBBP4Q09028 425 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 BAK1Q16611 211 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 IQCCQ4KMZ1 466 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 SOWAHCQ53LP3 525 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 EOGTQ5NDL2 527 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 DNAJC22Q8N4W6 341 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 FRMD1Q8N878 549 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 ASB12Q8WXK4 309 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 OR5P2Q8WZ92 322 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 FCRL4Q96PJ5 515 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 TMEM38AQ9H6F2 299 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 KIR3DX1Q9H7L2 352 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 TMEM184CQ9NVA4 438 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 ZNF624Q9P2J8 865 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 SNRNP200O75643 2136 aaKnown RBP16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 A0A0A6YYD5 115 aa16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 PDE9AO76083 593 aa16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 CHRM5P08912 532 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 CCNYL3P0C7X3 344 aa16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 CMPK1P30085 196 aa16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 PTGER1P34995 402 aa16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 DSTNP60981 165 aa16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 FOXD4Q12950 439 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 NPRL3Q12980 569 aa16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 FAM214AQ32MH5 1076 aa16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 SLC35F1Q5T1Q4 408 aa16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 ZNF367Q7RTV3 350 aa16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 TRIM69Q86WT6 500 aa16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 ATG16L2Q8NAA4 619 aa16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 GALNT11Q8NCW6 608 aa16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 BEX2Q9BXY8 128 aa16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 RAB23Q9ULC3 237 aa16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 MYO10Q9HD67 2058 aa16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 EFCAB10A6NFE3 127 aa16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 BTN3A3O00478 584 aa16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 HOXC4P09017 264 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 SLC19A1P41440 591 aa16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 PCBP4P57723 403 aaKnown RBP16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 RAB8AP61006 207 aa16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 ABATP80404 500 aa16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 EEF1A2Q05639 463 aaKnown RBP16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 ZNF79Q15937 498 aa16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 ZNF630Q2M218 657 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 ZNF782Q6ZMW2 699 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 TSEN54Q7Z6J9 526 aaKnown RBP16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 HORMAD2Q8N7B1 307 aa16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 DENND6BQ8NEG7 585 aa16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 C9orf43Q8TAL5 461 aaPredicted RBP16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 GGHQ92820 318 aa16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 RAB8BQ92930 207 aa16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 UBE2FQ969M7 185 aa16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 MS4A6EQ96DS6 147 aa16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 CCDC120Q96HB5 630 aa16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 NDUFAF4Q9P032 175 aa16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 PADI2Q9Y2J8 665 aa16.06■□□□□ 0.16
SHKBP1-205ENST00000594973 TP53BP2Q13625 1128 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 CCINQ13939 588 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 QPRTQ15274 297 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 RPS26P11Q5JNZ5 115 aaPredicted RBP16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 FAHD1Q6P587 224 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 Q6ZS52 159 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 OR52J3Q8NH60 311 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 UBASH3BQ8TF42 649 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 FAM3CQ92520 227 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 ZBED6CLQ96FA7 236 aaPredicted RBP16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 SRMSQ9H3Y6 488 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 NEUROD4Q9HD90 331 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 ING3Q9NXR8 418 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 ADAM29Q9UKF5 820 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 FBXW2Q9UKT8 454 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 MMP17Q9ULZ9 603 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 ZNF451Q9Y4E5 1061 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 A0A0B4J293 547 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 PLD2O14939 933 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 B4GALT2O60909 372 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 ERAL1O75616 437 aaKnown RBP16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 APBB3O95704 486 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 SEMA4FO95754 770 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 ARAFP10398 606 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 IFI30P13284 250 aa16.05■□□□□ 0.16
SHKBP1-205ENST00000594973 EPHA2P29317 976 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms