RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 YRDCQ86U90 279 aaKnown RBP11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 SLC44A2Q8IWA5 706 aaPredicted RBP11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 DDIASQ8IXT1 998 aa11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 FAM76AQ8TAV0 307 aa11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 AGR3Q8TD06 166 aa11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 EFHD2Q96C19 240 aaPredicted RBP11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 PKNOX2Q96KN3 472 aa11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 LURAP1Q96LR2 239 aa11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 VSTM2LQ96N03 204 aa11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 BTBD9Q96Q07 612 aa11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 TIMP4Q99727 224 aa11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 ENKD1Q9H0I2 346 aa11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 STMN4Q9H169 189 aaPredicted RBP11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 UBQLN3Q9H347 655 aa11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 TUBB1Q9H4B7 451 aa11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 LRTM1Q9HBL6 345 aa11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 SERHLQ9NQF3 203 aa11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 NPDC1Q9NQX5 325 aaPredicted RBP11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 DDX18Q9NVP1 670 aaKnown RBP11.6□□□□□ -0.55
NPLOC4-213ENST00000573519 NCKAP5O14513 1909 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 WDR91A4D1P6 747 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 OR6C70A6NIJ9 312 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 MYO1GB0I1T2 1018 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 SNPHO15079 494 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 TO15178 435 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 CTIFO43310 598 aaKnown RBP11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 PLOD3O60568 738 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 ABCB7O75027 752 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 TUBBP07437 444 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 BPGMP07738 259 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 LINC00032P0C843 101 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 CT45A8P0DMV1 189 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 CT45A9P0DMV2 189 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 BMP7P18075 431 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 MSX1P28360 303 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 ARRB2P32121 409 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 PTGDSP41222 190 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 WNT3P56703 355 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 RPL38P63173 70 aaKnown RBP11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 TLE4Q04727 773 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 SNTA1Q13424 505 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 EFR3AQ14156 821 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 GALNTL6Q49A17 601 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 CT45A2Q5DJT8 189 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 TMEM81Q6P7N7 255 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 IKBIPQ70UQ0 350 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 EXOC3L1Q86VI1 746 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 LIX1LQ8IVB5 337 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 PM20D2Q8IYS1 436 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 FAM83FQ8NEG4 500 aaPredicted RBP11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 OR4N2Q8NGD1 307 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 OR2T11Q8NH01 316 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 OR14L1PQ8NHC6 308 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 ABTB1Q969K4 478 aaPredicted RBP11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 EGLN2Q96KS0 407 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 TRMOQ9BU70 441 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 UGT2B28Q9BY64 529 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 GLIPR2Q9H4G4 154 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 C1orf109Q9NX04 203 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 WBP11Q9Y2W2 641 aaKnown RBP11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 TRAF6Q9Y4K3 522 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 CCL27Q9Y4X3 112 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 PCDHGB3Q9Y5G1 929 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 GTF3C1Q12789 2109 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 ITPR2Q14571 2701 aa11.59□□□□□ -0.55
NPLOC4-213ENST00000573519 AHRRA9YTQ3 701 aa11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 KDM4EB2RXH2 506 aaPredicted RBP11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 AKAP10O43572 662 aa11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 NPHS1O60500 1241 aa11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 TSPAN2O60636 221 aa11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 CBR3O75828 277 aa11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 SLITRK5O94991 958 aa11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 NEFHP12036 1026 aa11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 TACR1P25103 407 aa11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 GPC1P35052 558 aa11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 ETV4P43268 484 aa11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 RFX3P48380 749 aa11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 PSPHP78330 225 aa11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 TFF3Q07654 80 aa11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 HSPB3Q12988 150 aa11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 KIAA0040Q15053 153 aa11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 ZNHIT3Q15649 155 aaPredicted RBP11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 ACSF3Q4G176 576 aaPredicted RBP11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 DCST1Q5T197 706 aa11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 RIPPLY2Q5TAB7 128 aa11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 CES4AQ5XG92 561 aa11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 KANK2Q63ZY3 851 aa11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 VASNQ6EMK4 673 aa11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 OR5M10Q6IEU7 315 aa11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 ANKRD26P1Q6NSI1 321 aa11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 Q6ZSR9 355 aa11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 CLYBLQ8N0X4 340 aa11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 CLHC1Q8NHS4 586 aa11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 SLC35A4Q96G79 324 aa11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 AMDHD1Q96NU7 426 aa11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 TSSK3Q96PN8 268 aa11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 TRIB1Q96RU8 372 aa11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 EML4Q9HC35 981 aaKnown RBP11.58□□□□□ -0.56
NPLOC4-213ENST00000573519 EXO1Q9UQ84 846 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms