RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 DIRAS1O95057 198 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 NKX2-2O95096 273 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 TNFAIP8O95379 198 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 CBX7O95931 251 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 LGI1O95970 557 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 IFNA16P05015 189 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 CT62P0C5K7 136 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 PABPC4LP0CB38 370 aaKnown RBP12.85□□□□□ -0.35
TPM1-215ENST00000558868 UBTFL6P0CB48 400 aaPredicted RBP12.85□□□□□ -0.35
TPM1-215ENST00000558868 TNFRSF1BP20333 461 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 IGFBP5P24593 272 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 SOX18P35713 384 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 OR1D4P47884 311 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 RPS6KA3P51812 740 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 HMGA2P52926 109 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 POU6F2P78424 691 aaPredicted RBP12.85□□□□□ -0.35
TPM1-215ENST00000558868 BTG2P78543 158 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 CHRNEQ04844 493 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 BLMHQ13867 455 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 ERV3-1Q14264 604 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 EXOSC7Q15024 291 aaKnown RBP12.85□□□□□ -0.35
TPM1-215ENST00000558868 LARS2Q15031 903 aaKnown RBP12.85□□□□□ -0.35
TPM1-215ENST00000558868 EIPR1Q53HC9 387 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 ZNF311Q5JNZ3 666 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 DCST2Q5T1A1 773 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 MLIPQ5VWP3 458 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 LAIR1Q6GTX8 287 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 DBX2Q6ZNG2 339 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 TMPRSS9Q7Z410 1059 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 TMEM179BQ7Z7N9 219 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 PIK3C3Q8NEB9 887 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 GPR151Q8TDV0 419 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 GIPC3Q8TF64 312 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 APOBEC4Q8WW27 367 aaKnown RBP12.85□□□□□ -0.35
TPM1-215ENST00000558868 HOXB13Q92826 284 aaPredicted RBP12.85□□□□□ -0.35
TPM1-215ENST00000558868 CNDP2Q96KP4 475 aaKnown RBP12.85□□□□□ -0.35
TPM1-215ENST00000558868 PTCHD1Q96NR3 888 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 OR6C1Q96RD1 312 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 SDF2Q99470 211 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 LMF2Q9BU23 707 aaKnown RBP12.85□□□□□ -0.35
TPM1-215ENST00000558868 SMURF2Q9HAU4 748 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 PNPLA3Q9NST1 481 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 DHCR7Q9UBM7 475 aaKnown RBP12.85□□□□□ -0.35
TPM1-215ENST00000558868 PRODH2Q9UF12 536 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 TESMINQ9Y4I5 508 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 TMEM184BQ9Y519 407 aaPredicted RBP12.85□□□□□ -0.35
TPM1-215ENST00000558868 LYVE1Q9Y5Y7 322 aa12.85□□□□□ -0.35
TPM1-215ENST00000558868 UNC13CQ8NB66 2214 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 NTN3O00634 580 aaPredicted RBP12.84□□□□□ -0.35
TPM1-215ENST00000558868 GADD45GO95257 159 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 SNAP29O95721 258 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 THBS1P07996 1170 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 ANXA8P13928 327 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 MAOAP21397 527 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 S1PR1P21453 382 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 ACP1P24666 158 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 IFNA8P32881 189 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 CSTF2P33240 577 aaKnown RBP eCLIP12.84□□□□□ -0.35
TPM1-215ENST00000558868 GABRA3P34903 492 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 MAP3K8P41279 467 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 CDH12P55289 794 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 ADARB1P78563 741 aaKnown RBP12.84□□□□□ -0.35
TPM1-215ENST00000558868 FUT7Q11130 342 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 ZNF267Q14586 743 aaPredicted RBP12.84□□□□□ -0.35
TPM1-215ENST00000558868 PUM1Q14671 1186 aaKnown RBP eCLIP12.84□□□□□ -0.355e-9■□□□□ 8.1
TPM1-215ENST00000558868 COLEC12Q5KU26 742 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 PLA2G2CQ5R387 149 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 PHF19Q5T6S3 580 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 MFSD4BQ5TF39 518 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 TSEN54Q7Z6J9 526 aaKnown RBP12.84□□□□□ -0.35
TPM1-215ENST00000558868 ZNF605Q86T29 641 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 TAGAPQ8N103 731 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 ZNF619Q8N2I2 560 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 ATG16L2Q8NAA4 619 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 OR52P1PQ8NH57 321 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 PHF10Q8WUB8 498 aaKnown RBP12.84□□□□□ -0.35
TPM1-215ENST00000558868 ART5Q96L15 291 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 PSD2Q9BQI7 771 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 ZNF350Q9GZX5 532 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 SAP130Q9H0E3 1048 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 TOR3AQ9H497 397 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 ARMC7Q9H6L4 198 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 FOLH1BQ9HBA9 442 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 NECTIN3Q9NQS3 549 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 ENOPH1Q9UHY7 261 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 KCND3Q9UK17 655 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 TMCC3Q9ULS5 477 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 CFL2Q9Y281 166 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 PCDHGA8Q9Y5G5 932 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 HEMK1Q9Y5R4 338 aaPredicted RBP12.84□□□□□ -0.35
TPM1-215ENST00000558868 MAGED1Q9Y5V3 778 aaPredicted RBP12.84□□□□□ -0.35
TPM1-215ENST00000558868 KMT2EQ8IZD2 1858 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 PTPRZ1P23471 2315 aaPredicted RBP12.84□□□□□ -0.35
TPM1-215ENST00000558868 DNAH14Q0VDD8 3507 aa12.84□□□□□ -0.35
TPM1-215ENST00000558868 ARRDC5A6NEK1 342 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 PRAMEF25A6NGN4 478 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 D6RAR5 112 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 TGFBR3LH3BV60 316 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 UGT2B11O75310 529 aa12.83□□□□□ -0.36
TPM1-215ENST00000558868 JRKO75564 520 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 217.8 ms