RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 FOXB2Q5VYV0 432 aa13.99□□□□□ -0.17
SREK1-209ENST00000520953 APLFQ8IW19 511 aaPredicted RBP13.99□□□□□ -0.17
SREK1-209ENST00000520953 CDS1Q92903 461 aa13.99□□□□□ -0.17
SREK1-209ENST00000520953 MOAP1Q96BY2 351 aa13.99□□□□□ -0.17
SREK1-209ENST00000520953 CNBD2Q96M20 576 aa13.99□□□□□ -0.17
SREK1-209ENST00000520953 WDR77Q9BQA1 342 aaPredicted RBP13.99□□□□□ -0.17
SREK1-209ENST00000520953 NUDT9Q9BW91 350 aa13.99□□□□□ -0.17
SREK1-209ENST00000520953 ACTRT3Q9BYD9 372 aa13.99□□□□□ -0.17
SREK1-209ENST00000520953 RUBCNLQ9H714 662 aa13.99□□□□□ -0.17
SREK1-209ENST00000520953 POLR1BQ9H9Y6 1135 aa13.99□□□□□ -0.17
SREK1-209ENST00000520953 AGPAT4Q9NRZ5 378 aa13.99□□□□□ -0.17
SREK1-209ENST00000520953 CORO2BQ9UQ03 480 aa13.99□□□□□ -0.17
SREK1-209ENST00000520953 CLCA3PQ9Y6N3 262 aa13.99□□□□□ -0.17
SREK1-209ENST00000520953 PCSK5Q92824 1860 aa13.99□□□□□ -0.17
SREK1-209ENST00000520953 SEC24DO94855 1032 aaPredicted RBP13.99□□□□□ -0.17
SREK1-209ENST00000520953 ZIC2O95409 532 aaPredicted RBP13.99□□□□□ -0.17
SREK1-209ENST00000520953 OPN1SWP03999 348 aa13.99□□□□□ -0.17
SREK1-209ENST00000520953 TFPTP0C1Z6 253 aa13.99□□□□□ -0.17
SREK1-209ENST00000520953 ARAFP10398 606 aa13.99□□□□□ -0.17
SREK1-209ENST00000520953 SPINK2P20155 84 aa13.99□□□□□ -0.17
SREK1-209ENST00000520953 SCARB2Q14108 478 aa13.99□□□□□ -0.17
SREK1-209ENST00000520953 CCNJQ5T5M9 372 aa13.99□□□□□ -0.17
SREK1-209ENST00000520953 OR4N2Q8NGD1 307 aa13.99□□□□□ -0.17
SREK1-209ENST00000520953 C16orf52Q8NHV5 167 aa13.99□□□□□ -0.17
SREK1-209ENST00000520953 ZNF721Q8TF20 911 aa13.99□□□□□ -0.17
SREK1-209ENST00000520953 TMEM19Q96HH6 336 aa13.99□□□□□ -0.17
SREK1-209ENST00000520953 OR10A5Q9H207 317 aa13.99□□□□□ -0.17
SREK1-209ENST00000520953 WDR54Q9H977 334 aa13.99□□□□□ -0.17
SREK1-209ENST00000520953 FOLH1BQ9HBA9 442 aa13.99□□□□□ -0.17
SREK1-209ENST00000520953 FBXO34Q9NWN3 711 aa13.99□□□□□ -0.17
SREK1-209ENST00000520953 PCDHGA8Q9Y5G5 932 aa13.99□□□□□ -0.17
SREK1-209ENST00000520953 MRPS18BQ9Y676 258 aaKnown RBP13.99□□□□□ -0.17
SREK1-209ENST00000520953 LOC400499M0QZD8 3231 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 GXYLT2A0PJZ3 443 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 SOCS2O14508 198 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 CREG1O75629 220 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 IGKV3-11P04433 115 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 PCGF2P35227 344 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 KHKP50053 298 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 CDK6Q00534 326 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 ZNF155Q12901 538 aaPredicted RBP13.98□□□□□ -0.17
SREK1-209ENST00000520953 TGIF1Q15583 401 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 LRRC23Q53EV4 343 aaPredicted RBP13.98□□□□□ -0.17
SREK1-209ENST00000520953 EXOSC6Q5RKV6 272 aaKnown RBP13.98□□□□□ -0.17
SREK1-209ENST00000520953 NPSR1Q6W5P4 371 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 C11orf65Q8NCR3 313 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 MIPOL1Q8TD10 442 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 VSTM2LQ96N03 204 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 TMEM38AQ9H6F2 299 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 HEMK1Q9Y5R4 338 aaPredicted RBP13.98□□□□□ -0.17
SREK1-209ENST00000520953 LOC101059948A0A1B0GTJ6 334 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 SAC3D1A6NKF1 404 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 CHRM4P08173 479 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 CCNYL3P0C7X3 344 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 SLC37A1P57057 533 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 CDC73Q6P1J9 531 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 BHLHB9Q6PI77 547 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 ENPP6Q6UWR7 440 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 ISLR2Q6UXK2 745 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 ZBTB49Q6ZSB9 765 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 PROSER1Q86XN7 944 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 EPHX4Q8IUS5 362 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 LGI4Q8N135 537 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 ZSCAN1Q8NBB4 408 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 FAM162AQ96A26 154 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 FBXL20Q96IG2 436 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 LMF1Q96S06 567 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 ITPAQ9BY32 194 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 NRSN2Q9GZP1 204 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 QRSL1Q9H0R6 528 aaKnown RBP13.98□□□□□ -0.17
SREK1-209ENST00000520953 RAD21L1Q9H4I0 556 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 LIN28AQ9H9Z2 209 aaKnown RBP13.98□□□□□ -0.17
SREK1-209ENST00000520953 ASCL3Q9NQ33 180 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 ZNF223Q9UK11 482 aaPredicted RBP13.98□□□□□ -0.17
SREK1-209ENST00000520953 AP3M1Q9Y2T2 418 aa13.98□□□□□ -0.17
SREK1-209ENST00000520953 TMEM229AB2RXF0 380 aa13.97□□□□□ -0.17
SREK1-209ENST00000520953 SLC28A2O43868 658 aa13.97□□□□□ -0.17
SREK1-209ENST00000520953 RAD1O60671 282 aa13.97□□□□□ -0.17
SREK1-209ENST00000520953 SERPINA1P01009 418 aa13.97□□□□□ -0.17
SREK1-209ENST00000520953 CELA2AP08217 269 aa13.97□□□□□ -0.17
SREK1-209ENST00000520953 PAX7P23759 505 aa13.97□□□□□ -0.17
SREK1-209ENST00000520953 FASP25445 335 aa13.97□□□□□ -0.17
SREK1-209ENST00000520953 MAP3K8P41279 467 aa13.97□□□□□ -0.17
SREK1-209ENST00000520953 GPR143P51810 404 aa13.97□□□□□ -0.17
SREK1-209ENST00000520953 POLE2P56282 527 aa13.97□□□□□ -0.17
SREK1-209ENST00000520953 PSG6Q00889 435 aa13.97□□□□□ -0.17
SREK1-209ENST00000520953 CYP27C1Q4G0S4 372 aa13.97□□□□□ -0.17
SREK1-209ENST00000520953 PPP4R4Q6NUP7 873 aa13.97□□□□□ -0.17
SREK1-209ENST00000520953 TMEM205Q6UW68 189 aa13.97□□□□□ -0.17
SREK1-209ENST00000520953 CHERPQ8IWX8 916 aaKnown RBP13.97□□□□□ -0.17
SREK1-209ENST00000520953 CACTIN-AS1Q8N1I8 211 aa13.97□□□□□ -0.17
SREK1-209ENST00000520953 PAPD5Q8NDF8 572 aaKnown RBP13.97□□□□□ -0.17
SREK1-209ENST00000520953 OR2Y1Q8NGV0 311 aa13.97□□□□□ -0.17
SREK1-209ENST00000520953 METTL21AQ8WXB1 218 aa13.97□□□□□ -0.17
SREK1-209ENST00000520953 NSMCE2Q96MF7 247 aa13.97□□□□□ -0.17
SREK1-209ENST00000520953 A4GALTQ9NPC4 353 aa13.97□□□□□ -0.17
SREK1-209ENST00000520953 MAGEL2Q9UJ55 1249 aa13.97□□□□□ -0.17
SREK1-209ENST00000520953 ANAPC2Q9UJX6 822 aa13.97□□□□□ -0.17
SREK1-209ENST00000520953 HS3ST3B1Q9Y662 390 aa13.97□□□□□ -0.17
SREK1-209ENST00000520953 CDRT15L2A8MXV6 281 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms