RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 CHMP24386 653 aa18.86■□□□□ 0.61
CPNE1-219ENST00000440240 KRT20P35900 424 aa18.86■□□□□ 0.61
CPNE1-219ENST00000440240 SLCO1A2P46721 670 aa18.86■□□□□ 0.61
CPNE1-219ENST00000440240 EFR3AQ14156 821 aa18.86■□□□□ 0.61
CPNE1-219ENST00000440240 HEPACAMQ14CZ8 416 aa18.86■□□□□ 0.61
CPNE1-219ENST00000440240 ERCC6LQ2NKX8 1250 aa18.86■□□□□ 0.61
CPNE1-219ENST00000440240 ZNF628Q5EBL2 1059 aa18.86■□□□□ 0.61
CPNE1-219ENST00000440240 ZNF678Q5SXM1 525 aa18.86■□□□□ 0.61
CPNE1-219ENST00000440240 TIFABQ6ZNK6 161 aa18.86■□□□□ 0.61
CPNE1-219ENST00000440240 ADGRE4PQ86SQ3 457 aa18.86■□□□□ 0.61
CPNE1-219ENST00000440240 LCA5Q86VQ0 697 aa18.86■□□□□ 0.61
CPNE1-219ENST00000440240 UHMK1Q8TAS1 419 aaKnown RBP18.86■□□□□ 0.61
CPNE1-219ENST00000440240 LINC01560Q8TB33 94 aa18.86■□□□□ 0.61
CPNE1-219ENST00000440240 METTL6Q8TCB7 284 aa18.86■□□□□ 0.61
CPNE1-219ENST00000440240 MTBPQ96DY7 904 aa18.86■□□□□ 0.61
CPNE1-219ENST00000440240 SLC35A4Q96G79 324 aa18.86■□□□□ 0.61
CPNE1-219ENST00000440240 BTBD9Q96Q07 612 aa18.86■□□□□ 0.61
CPNE1-219ENST00000440240 ZNF382Q96SR6 550 aa18.86■□□□□ 0.61
CPNE1-219ENST00000440240 ACBD3Q9H3P7 528 aa18.86■□□□□ 0.61
CPNE1-219ENST00000440240 GIMAP4Q9NUV9 329 aa18.86■□□□□ 0.61
CPNE1-219ENST00000440240 STK38LQ9Y2H1 464 aa18.86■□□□□ 0.61
CPNE1-219ENST00000440240 MRPS18CQ9Y3D5 142 aaKnown RBP18.86■□□□□ 0.61
CPNE1-219ENST00000440240 HRNRQ86YZ3 2850 aaPredicted RBP18.86■□□□□ 0.61
CPNE1-219ENST00000440240 EXPH5Q8NEV8 1989 aa18.85■□□□□ 0.61
CPNE1-219ENST00000440240 DIAPH2O60879 1101 aa18.85■□□□□ 0.61
CPNE1-219ENST00000440240 IL3P08700 152 aa18.85■□□□□ 0.61
CPNE1-219ENST00000440240 CT45A8P0DMV1 189 aa18.85■□□□□ 0.61
CPNE1-219ENST00000440240 CT45A9P0DMV2 189 aa18.85■□□□□ 0.61
CPNE1-219ENST00000440240 IMPDH1P20839 514 aa18.85■□□□□ 0.61
CPNE1-219ENST00000440240 HMOX2P30519 316 aa18.85■□□□□ 0.61
CPNE1-219ENST00000440240 SRD5A2P31213 254 aa18.85■□□□□ 0.61
CPNE1-219ENST00000440240 MPIP34949 423 aa18.85■□□□□ 0.61
CPNE1-219ENST00000440240 GFRA1P56159 465 aa18.85■□□□□ 0.61
CPNE1-219ENST00000440240 SRYQ05066 204 aa18.85■□□□□ 0.61
CPNE1-219ENST00000440240 GAB1Q13480 694 aa18.85■□□□□ 0.61
CPNE1-219ENST00000440240 GLE1Q53GS7 698 aaKnown RBP18.85■□□□□ 0.61
CPNE1-219ENST00000440240 UNC50Q53HI1 259 aa18.85■□□□□ 0.61
CPNE1-219ENST00000440240 SPIN4Q56A73 249 aa18.85■□□□□ 0.61
CPNE1-219ENST00000440240 CT45A2Q5DJT8 189 aa18.85■□□□□ 0.61
CPNE1-219ENST00000440240 GPRIN3Q6ZVF9 776 aa18.85■□□□□ 0.61
CPNE1-219ENST00000440240 MNS1Q8NEH6 495 aa18.85■□□□□ 0.61
CPNE1-219ENST00000440240 RDH11Q8TC12 318 aa18.85■□□□□ 0.61
CPNE1-219ENST00000440240 ADOQ96SZ5 270 aa18.85■□□□□ 0.61
CPNE1-219ENST00000440240 RBM24Q9BX46 236 aaKnown RBP18.85■□□□□ 0.61
CPNE1-219ENST00000440240 NAV3Q8IVL0 2385 aa18.84■□□□□ 0.61
CPNE1-219ENST00000440240 EXOC1LA0A1B0GW35 172 aa18.84■□□□□ 0.61
CPNE1-219ENST00000440240 CCDC151A5D8V7 595 aa18.84■□□□□ 0.61
CPNE1-219ENST00000440240 PCDH7O60245 1069 aa18.84■□□□□ 0.61
CPNE1-219ENST00000440240 TSPAN2O60636 221 aa18.84■□□□□ 0.61
CPNE1-219ENST00000440240 RAF1P04049 648 aa18.84■□□□□ 0.61
CPNE1-219ENST00000440240 PNLIPRP2P54317 469 aa18.84■□□□□ 0.61
CPNE1-219ENST00000440240 MRPS22P82650 360 aaKnown RBP18.84■□□□□ 0.61
CPNE1-219ENST00000440240 ACSM2AQ08AH3 577 aa18.84■□□□□ 0.61
CPNE1-219ENST00000440240 FOXF2Q12947 444 aa18.84■□□□□ 0.61
CPNE1-219ENST00000440240 TCHHL1Q5QJ38 904 aaPredicted RBP18.84■□□□□ 0.61
CPNE1-219ENST00000440240 ACSM2BQ68CK6 577 aa18.84■□□□□ 0.61
CPNE1-219ENST00000440240 PAMR1Q6UXH9 720 aa18.84■□□□□ 0.61
CPNE1-219ENST00000440240 DOCK7Q96N67 2140 aa18.84■□□□□ 0.61
CPNE1-219ENST00000440240 DACH2Q96NX9 599 aa18.84■□□□□ 0.61
CPNE1-219ENST00000440240 YIPF4Q9BSR8 244 aa18.84■□□□□ 0.61
CPNE1-219ENST00000440240 SHCBP1LQ9BZQ2 653 aa18.84■□□□□ 0.61
CPNE1-219ENST00000440240 PIGMQ9H3S5 423 aa18.84■□□□□ 0.61
CPNE1-219ENST00000440240 SLC35C2Q9NQQ7 365 aa18.84■□□□□ 0.61
CPNE1-219ENST00000440240 TAS2R9Q9NYW1 312 aa18.84■□□□□ 0.61
CPNE1-219ENST00000440240 TMEM216Q9P0N5 145 aa18.84■□□□□ 0.61
CPNE1-219ENST00000440240 WIF1Q9Y5W5 379 aa18.84■□□□□ 0.61
CPNE1-219ENST00000440240 CLCA1A8K7I4 914 aa18.83■□□□□ 0.6
CPNE1-219ENST00000440240 DLX3O60479 287 aa18.83■□□□□ 0.6
CPNE1-219ENST00000440240 PLOD3O60568 738 aa18.83■□□□□ 0.6
CPNE1-219ENST00000440240 CHN1P15882 459 aa18.83■□□□□ 0.6
CPNE1-219ENST00000440240 ATP5F1P24539 256 aaPredicted RBP18.83■□□□□ 0.6
CPNE1-219ENST00000440240 IL12BP29460 328 aa18.83■□□□□ 0.6
CPNE1-219ENST00000440240 ECHS1P30084 290 aa18.83■□□□□ 0.6
CPNE1-219ENST00000440240 GSTM5P46439 218 aa18.83■□□□□ 0.6
CPNE1-219ENST00000440240 CPA2P48052 419 aa18.83■□□□□ 0.6
CPNE1-219ENST00000440240 RAE1P78406 368 aaKnown RBP18.83■□□□□ 0.6
CPNE1-219ENST00000440240 KEAP1Q14145 624 aa18.83■□□□□ 0.6
CPNE1-219ENST00000440240 GALNT18Q6P9A2 607 aa18.83■□□□□ 0.6
CPNE1-219ENST00000440240 LARP4Q71RC2 724 aaKnown RBP eCLIP18.83■□□□□ 0.6
CPNE1-219ENST00000440240 SLC22A9Q8IVM8 553 aa18.83■□□□□ 0.6
CPNE1-219ENST00000440240 NOA1Q8NC60 698 aaKnown RBP18.83■□□□□ 0.6
CPNE1-219ENST00000440240 OR9A2Q8NGT5 310 aa18.83■□□□□ 0.6
CPNE1-219ENST00000440240 KAT2AQ92830 837 aa18.83■□□□□ 0.6
CPNE1-219ENST00000440240 EXOSC8Q96B26 276 aaKnown RBP18.83■□□□□ 0.6
CPNE1-219ENST00000440240 INTS12Q96CB8 462 aaKnown RBP18.83■□□□□ 0.6
CPNE1-219ENST00000440240 C16orf45Q96MC5 204 aaPredicted RBP18.83■□□□□ 0.6
CPNE1-219ENST00000440240 VSTM2LQ96N03 204 aa18.83■□□□□ 0.6
CPNE1-219ENST00000440240 SFXN2Q96NB2 322 aa18.83■□□□□ 0.6
CPNE1-219ENST00000440240 ACPTQ9BZG2 426 aa18.83■□□□□ 0.6
CPNE1-219ENST00000440240 STMN4Q9H169 189 aaPredicted RBP18.83■□□□□ 0.6
CPNE1-219ENST00000440240 ANKRA2Q9H9E1 313 aa18.83■□□□□ 0.6
CPNE1-219ENST00000440240 ZNF469Q96JG9 3925 aaPredicted RBP18.82■□□□□ 0.6
CPNE1-219ENST00000440240 ENO1P06733 434 aaKnown RBP18.82■□□□□ 0.6
CPNE1-219ENST00000440240 FOSL1P15407 271 aa18.82■□□□□ 0.6
CPNE1-219ENST00000440240 STARP49675 285 aa18.82■□□□□ 0.6
CPNE1-219ENST00000440240 PRKAA2P54646 552 aa18.82■□□□□ 0.6
CPNE1-219ENST00000440240 DIO3P55073 304 aa18.82■□□□□ 0.6
CPNE1-219ENST00000440240 PKNOX1P55347 436 aa18.82■□□□□ 0.6
CPNE1-219ENST00000440240 CORO7P57737 925 aa18.82■□□□□ 0.6
CPNE1-219ENST00000440240 BCL2A1Q16548 175 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms