RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 ASGR2P07307 311 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 IGFBP4P22692 258 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 RGS6P49758 472 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 MRPS21P82921 87 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 HYAL2Q12891 473 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 IRF3Q14653 427 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 NFATC4Q14934 902 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 NDUFAF5Q5TEU4 345 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 PXDC1Q5TGL8 231 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 OR4C11Q6IEV9 310 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 HDDC2Q7Z4H3 204 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 LHFPL5Q8TAF8 219 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 ASB15Q8WXK1 588 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 CRELD1Q96HD1 420 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 DOHHQ9BU89 302 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 NLNQ9BYT8 704 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 SLC7A5P2Q9GIP4 190 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 PITHD1Q9GZP4 211 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 TMEM168Q9H0V1 697 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 LIN7BQ9HAP6 207 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 SMURF1Q9HCE7 757 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 PDP1Q9P0J1 537 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 MTCH2Q9Y6C9 303 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 COLEC10Q9Y6Z7 277 aa16.1■□□□□ 0.17
SHKBP1-205ENST00000594973 WASHC1A8K0Z3 465 aa16.09■□□□□ 0.17
SHKBP1-205ENST00000594973 ISM1B1AKI9 464 aa16.09■□□□□ 0.17
SHKBP1-205ENST00000594973 TMEM229AB2RXF0 380 aa16.09■□□□□ 0.17
SHKBP1-205ENST00000594973 TFECO14948 347 aaPredicted RBP16.09■□□□□ 0.17
SHKBP1-205ENST00000594973 RASGRP1O95267 797 aa16.09■□□□□ 0.17
SHKBP1-205ENST00000594973 FPR1P21462 350 aa16.09■□□□□ 0.17
SHKBP1-205ENST00000594973 DNAJA1P31689 397 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-205ENST00000594973 CSTF2P33240 577 aaKnown RBP eCLIP16.09■□□□□ 0.17
SHKBP1-205ENST00000594973 ACTR1BP42025 376 aa16.09■□□□□ 0.17
SHKBP1-205ENST00000594973 OR1E2P47887 323 aa16.09■□□□□ 0.17
SHKBP1-205ENST00000594973 KIAA1024LP59773 190 aa16.09■□□□□ 0.17
SHKBP1-205ENST00000594973 ACTR1AP61163 376 aa16.09■□□□□ 0.17
SHKBP1-205ENST00000594973 POU6F2P78424 691 aaPredicted RBP16.09■□□□□ 0.17
SHKBP1-205ENST00000594973 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.09■□□□□ 0.17
SHKBP1-205ENST00000594973 IKZF1Q13422 519 aa16.09■□□□□ 0.17
SHKBP1-205ENST00000594973 WASH2PQ6VEQ5 465 aa16.09■□□□□ 0.17
SHKBP1-205ENST00000594973 YIPF7Q8N8F6 280 aa16.09■□□□□ 0.17
SHKBP1-205ENST00000594973 LCN9Q8WX39 176 aa16.09■□□□□ 0.17
SHKBP1-205ENST00000594973 C7orf34Q96L11 122 aa16.09■□□□□ 0.17
SHKBP1-205ENST00000594973 COL21A1Q96P44 957 aa16.09■□□□□ 0.17
SHKBP1-205ENST00000594973 WDFY2Q96P53 400 aa16.09■□□□□ 0.17
SHKBP1-205ENST00000594973 CHCHD6Q9BRQ6 235 aa16.09■□□□□ 0.17
SHKBP1-205ENST00000594973 V9GYH0 126 aa16.09■□□□□ 0.17
SHKBP1-205ENST00000594973 TRBC2A0A5B9 178 aa16.08■□□□□ 0.17
SHKBP1-205ENST00000594973 GLOD5A6NK44 160 aa16.08■□□□□ 0.17
SHKBP1-205ENST00000594973 SEC14L5O43304 696 aa16.08■□□□□ 0.17
SHKBP1-205ENST00000594973 NARSO43776 548 aaKnown RBP16.08■□□□□ 0.17
SHKBP1-205ENST00000594973 KIAA0513O60268 411 aa16.08■□□□□ 0.17
SHKBP1-205ENST00000594973 PRKRAO75569 313 aaKnown RBP16.08■□□□□ 0.17
SHKBP1-205ENST00000594973 CLEC3AO75596 197 aa16.08■□□□□ 0.17
SHKBP1-205ENST00000594973 CBLP22681 906 aa16.08■□□□□ 0.17
SHKBP1-205ENST00000594973 SRP54P61011 504 aaKnown RBP16.08■□□□□ 0.17
SHKBP1-205ENST00000594973 SELENOWP63302 87 aa16.08■□□□□ 0.17
SHKBP1-205ENST00000594973 CDK6Q00534 326 aa16.08■□□□□ 0.17
SHKBP1-205ENST00000594973 PUS10Q3MIT2 529 aaKnown RBP16.08■□□□□ 0.17
SHKBP1-205ENST00000594973 ZNF793Q6ZN11 406 aa16.08■□□□□ 0.17
SHKBP1-205ENST00000594973 KRT73Q86Y46 540 aa16.08■□□□□ 0.17
SHKBP1-205ENST00000594973 CCDC71Q8IV32 467 aaPredicted RBP16.08■□□□□ 0.17
SHKBP1-205ENST00000594973 WDR92Q96MX6 357 aa16.08■□□□□ 0.17
SHKBP1-205ENST00000594973 MMP28Q9H239 520 aa16.08■□□□□ 0.17
SHKBP1-205ENST00000594973 RNF167Q9H6Y7 350 aa16.08■□□□□ 0.17
SHKBP1-205ENST00000594973 C8orf33Q9H7E9 229 aaPredicted RBP16.08■□□□□ 0.17
SHKBP1-205ENST00000594973 REEP1Q9H902 201 aa16.08■□□□□ 0.17
SHKBP1-205ENST00000594973 RNF121Q9H920 327 aa16.08■□□□□ 0.17
SHKBP1-205ENST00000594973 TIGARQ9NQ88 270 aa16.08■□□□□ 0.17
SHKBP1-205ENST00000594973 RASSF1Q9NS23 344 aa16.08■□□□□ 0.17
SHKBP1-205ENST00000594973 MUTYHQ9UIF7 546 aa16.08■□□□□ 0.17
SHKBP1-205ENST00000594973 B4DXG7 233 aa16.08■□□□□ 0.16
SHKBP1-205ENST00000594973 ERI3O43414 337 aaKnown RBP16.08■□□□□ 0.16
SHKBP1-205ENST00000594973 PRICKLE3O43900 615 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-205ENST00000594973 HNRNPA2B1P22626 353 aaKnown RBP16.08■□□□□ 0.16
SHKBP1-205ENST00000594973 UQCRC2P22695 453 aa16.08■□□□□ 0.16
SHKBP1-205ENST00000594973 TALDO1P37837 337 aa16.08■□□□□ 0.16
SHKBP1-205ENST00000594973 SPDYE7PQ495Y7 208 aa16.08■□□□□ 0.16
SHKBP1-205ENST00000594973 TNFAIP8L2Q6P589 184 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-205ENST00000594973 C19orf48Q6RUI8 117 aa16.08■□□□□ 0.16
SHKBP1-205ENST00000594973 ENTHD1Q8IYW4 607 aa16.08■□□□□ 0.16
SHKBP1-205ENST00000594973 SRRQ9GZT4 340 aa16.08■□□□□ 0.16
SHKBP1-205ENST00000594973 SYNPO2LQ9H987 977 aa16.08■□□□□ 0.16
SHKBP1-205ENST00000594973 THUMPD1Q9NXG2 353 aaKnown RBP16.08■□□□□ 0.16
SHKBP1-205ENST00000594973 TNFRSF10DQ9UBN6 386 aa16.08■□□□□ 0.16
SHKBP1-205ENST00000594973 CLCA1A8K7I4 914 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 C4orf51C9J302 202 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 SH3BP5O60239 455 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 GABRG2P18507 467 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 CPN2P22792 545 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 C21orf33P30042 268 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 ITGA1P56199 1179 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 RPP38P78345 283 aaKnown RBP16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 COL9A2Q14055 689 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 BTBD16Q32M84 506 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 CEACAM20Q6UY09 585 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 TMPRSS11AQ6ZMR5 421 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 SZRD1Q7Z422 152 aa16.07■□□□□ 0.16
SHKBP1-205ENST00000594973 SLC44A2Q8IWA5 706 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms