RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 GUCY1A3Q02108 690 aa9.42□□□□□ -0.9
SDF2-209ENST00000591903 EMX2Q04743 252 aa9.42□□□□□ -0.9
SDF2-209ENST00000591903 DEFB134Q4QY38 66 aa9.42□□□□□ -0.9
SDF2-209ENST00000591903 TCHHL1Q5QJ38 904 aaPredicted RBP9.42□□□□□ -0.9
SDF2-209ENST00000591903 C16orf47Q6ZP98 133 aaPredicted RBP9.42□□□□□ -0.9
SDF2-209ENST00000591903 GK5Q6ZS86 529 aa9.42□□□□□ -0.9
SDF2-209ENST00000591903 TRILQ7L0X0 811 aa9.42□□□□□ -0.9
SDF2-209ENST00000591903 COMMD6Q7Z4G1 85 aa9.42□□□□□ -0.9
SDF2-209ENST00000591903 MDGA2Q7Z553 956 aa9.42□□□□□ -0.9
SDF2-209ENST00000591903 SPATA19Q7Z5L4 167 aa9.42□□□□□ -0.9
SDF2-209ENST00000591903 PDSS2Q86YH6 399 aa9.42□□□□□ -0.9
SDF2-209ENST00000591903 DDIASQ8IXT1 998 aa9.42□□□□□ -0.9
SDF2-209ENST00000591903 ZNF595Q8IYB9 648 aa9.42□□□□□ -0.9
SDF2-209ENST00000591903 SAMD14Q8IZD0 417 aaPredicted RBP9.42□□□□□ -0.9
SDF2-209ENST00000591903 CIARTQ8N365 385 aaPredicted RBP9.42□□□□□ -0.9
SDF2-209ENST00000591903 FAM109AQ8N4B1 249 aa9.42□□□□□ -0.9
SDF2-209ENST00000591903 PSD4Q8NDX1 1056 aa9.42□□□□□ -0.9
SDF2-209ENST00000591903 OR2M7Q8NG81 312 aa9.42□□□□□ -0.9
SDF2-209ENST00000591903 CEP70Q8NHQ1 597 aa9.42□□□□□ -0.9
SDF2-209ENST00000591903 TBC1D20Q96BZ9 403 aa9.42□□□□□ -0.9
SDF2-209ENST00000591903 CHMP6Q96FZ7 201 aa9.42□□□□□ -0.9
SDF2-209ENST00000591903 PEX11GQ96HA9 241 aa9.42□□□□□ -0.9
SDF2-209ENST00000591903 CCDC28BQ9BUN5 200 aa9.42□□□□□ -0.9
SDF2-209ENST00000591903 KLHL31Q9H511 634 aa9.42□□□□□ -0.9
SDF2-209ENST00000591903 LRTM1Q9HBL6 345 aa9.42□□□□□ -0.9
SDF2-209ENST00000591903 SLCO1B3Q9NPD5 702 aa9.42□□□□□ -0.9
SDF2-209ENST00000591903 EHD3Q9NZN3 535 aa9.42□□□□□ -0.9
SDF2-209ENST00000591903 ERVK-11Q9UQG0 969 aa9.42□□□□□ -0.9
SDF2-209ENST00000591903 NAALAD2Q9Y3Q0 740 aa9.42□□□□□ -0.9
SDF2-209ENST00000591903 MMACHCQ9Y4U1 282 aa9.42□□□□□ -0.9
SDF2-209ENST00000591903 USH1CQ9Y6N9 552 aa9.42□□□□□ -0.9
SDF2-209ENST00000591903 ZANQ9Y493 2812 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 C1orf226A1L170 272 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 FAM166BA8MTA8 275 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 A8MVJ9 347 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 TMEM233B4DJY2 109 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 C4orf51C9J302 202 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 SMAD7O15105 426 aaKnown RBP9.41□□□□□ -0.9
SDF2-209ENST00000591903 TBX19O60806 448 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 SMPD2O60906 423 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 GLSO94925 669 aaPredicted RBP9.41□□□□□ -0.9
SDF2-209ENST00000591903 PRPS2P11908 318 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 LBPP18428 481 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 SERPINB3P29508 390 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 TLX1P31314 330 aaPredicted RBP9.41□□□□□ -0.9
SDF2-209ENST00000591903 LSP1P33241 339 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 RPL3P39023 403 aaKnown RBP9.41□□□□□ -0.9
SDF2-209ENST00000591903 BUD31P41223 144 aaPredicted RBP9.41□□□□□ -0.9
SDF2-209ENST00000591903 MAN2A2P49641 1150 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 SSR4P51571 173 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 CLCN2P51788 898 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 MAPK12P53778 367 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 PLA2G16P53816 162 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 HSD17B7P56937 341 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 RAB8AP61006 207 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 BTN3A2P78410 334 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 ZNF763Q0D2J5 394 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 HEPACAMQ14CZ8 416 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 C6orf136Q5SQH8 315 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 METTL21CQ5VZV1 264 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 CYP20A1Q6UW02 462 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 EPGNQ6UW88 154 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 ZNF793Q6ZN11 406 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 QSOX2Q6ZRP7 698 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 LARP4Q71RC2 724 aaKnown RBP eCLIP9.41□□□□□ -0.9
SDF2-209ENST00000591903 C1orf52Q8N6N3 182 aaKnown RBP9.41□□□□□ -0.9
SDF2-209ENST00000591903 NATD1Q8N6N6 113 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 RELL2Q8NC24 303 aaPredicted RBP9.41□□□□□ -0.9
SDF2-209ENST00000591903 OR2T11Q8NH01 316 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.41□□□□□ -0.9
SDF2-209ENST00000591903 ZCCHC10Q8TBK6 192 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 PIGTQ969N2 578 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 TUBGCP3Q96CW5 907 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 MTERF3Q96E29 417 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 Q96MF0 132 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 YIPF4Q9BSR8 244 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 FAIM2Q9BWQ8 316 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 MRPL1Q9BYD6 325 aaKnown RBP9.41□□□□□ -0.9
SDF2-209ENST00000591903 RBCK1Q9BYM8 510 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 TTTY12Q9BZ98 90 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 NSRP1Q9H0G5 558 aaKnown RBP9.41□□□□□ -0.9
SDF2-209ENST00000591903 MYNNQ9NPC7 610 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 DEPPQ9NTK1 212 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 RYDENQ9NUL5 291 aaKnown RBP9.41□□□□□ -0.9
SDF2-209ENST00000591903 PNPOQ9NVS9 261 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 HPF1Q9NWY4 346 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 NOP53Q9NZM5 478 aaKnown RBP9.41□□□□□ -0.9
SDF2-209ENST00000591903 KCMF1Q9P0J7 381 aa9.41□□□□□ -0.9
SDF2-209ENST00000591903 ZNF629Q9UEG4 869 aaPredicted RBP9.41□□□□□ -0.9
SDF2-209ENST00000591903 YARS2Q9Y2Z4 477 aaKnown RBP9.41□□□□□ -0.9
SDF2-209ENST00000591903 TRBV11-1A0A0K0K1C0 115 aa9.4□□□□□ -0.9
SDF2-209ENST00000591903 PSMD12O00232 456 aaPredicted RBP9.4□□□□□ -0.9
SDF2-209ENST00000591903 CLDN4O14493 209 aa9.4□□□□□ -0.9
SDF2-209ENST00000591903 SDHDO14521 159 aa9.4□□□□□ -0.9
SDF2-209ENST00000591903 PCDH7O60245 1069 aa9.4□□□□□ -0.9
SDF2-209ENST00000591903 HCN1O60741 890 aa9.4□□□□□ -0.9
SDF2-209ENST00000591903 SHOX2O60902 331 aaPredicted RBP9.4□□□□□ -0.9
SDF2-209ENST00000591903 SEC22BO75396 215 aa9.4□□□□□ -0.9
SDF2-209ENST00000591903 IFNA2P01563 188 aa9.4□□□□□ -0.9
SDF2-209ENST00000591903 IFI6P09912 130 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms