RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 HAGHQ16775 308 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 SHROOM1Q2M3G4 852 aaPredicted RBP1.97□□□□□ -2.09
LMNB1-207ENST00000494185 CCDC152Q4G0S7 254 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 RFTN2Q52LD8 501 aaPredicted RBP1.97□□□□□ -2.09
LMNB1-207ENST00000494185 SPANXN4Q5MJ08 99 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 CCDC183Q5T5S1 534 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 KRTAP5-1Q6L8H4 278 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 ASRGL1Q7L266 308 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 LRRC70Q7Z2Q7 622 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 GPR142Q7Z601 462 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 ITIH5Q86UX2 942 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 RANBP3LQ86VV4 465 aaPredicted RBP1.97□□□□□ -2.09
LMNB1-207ENST00000494185 CDC20BQ86Y33 519 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 GRAMD2AQ8IUY3 354 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 DND1Q8IYX4 353 aaKnown RBP1.97□□□□□ -2.09
LMNB1-207ENST00000494185 SLC22A15Q8IZD6 547 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 GVQW1Q8N7I0 195 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 POM121L12Q8N7R1 296 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 EIF1ADQ8N9N8 165 aaKnown RBP1.97□□□□□ -2.09
LMNB1-207ENST00000494185 MLKLQ8NB16 471 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 Q8NBF4 154 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 ZNF397Q8NF99 534 aaPredicted RBP1.97□□□□□ -2.09
LMNB1-207ENST00000494185 OR5AU1Q8NGC0 362 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 OR9Q2Q8NGE9 314 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 OR5M9Q8NGP3 310 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 OR2T3Q8NH03 318 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 WDR36Q8NI36 951 aaKnown RBP1.97□□□□□ -2.09
LMNB1-207ENST00000494185 CTNNBL1Q8WYA6 563 aaPredicted RBP1.97□□□□□ -2.09
LMNB1-207ENST00000494185 SMPDL3AQ92484 453 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 ATXN7L3BQ96GX2 97 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 C4orf36Q96KX1 117 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 CXorf58Q96LI9 332 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 PRICKLE1Q96MT3 831 aaPredicted RBP1.97□□□□□ -2.09
LMNB1-207ENST00000494185 FAM218AQ96MZ4 157 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 ACCSQ96QU6 501 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 ERGIC2Q96RQ1 377 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 RAB40CQ96S21 281 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 ZNF607Q96SK3 696 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 ZBTB18Q99592 522 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 CCT7Q99832 543 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 OVOL2Q9BRP0 275 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 ERVK-6Q9BXR3 956 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 HEXA-AS1Q9H8Q6 139 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 MOB1AQ9H8S9 216 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 POLD4Q9HCU8 107 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 PALMDQ9NP74 551 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 FANCFQ9NPI8 374 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 AGPAT5Q9NUQ2 364 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 MED17Q9NVC6 651 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 NMRK1Q9NWW6 199 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 SENP1Q9P0U3 644 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 BAIAP2L1Q9UHR4 511 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 POMT2Q9UKY4 750 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 TP53TG3Q9ULZ0 132 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 ZNF175Q9Y473 711 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 ATG4BQ9Y4P1 393 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 PTCH1Q13635 1447 aa1.97□□□□□ -2.09
LMNB1-207ENST00000494185 IGKV6D-41A0A0C4DH26 115 aa1.96□□□□□ -2.1
LMNB1-207ENST00000494185 XKRY2A2RUG3 117 aa1.96□□□□□ -2.1
LMNB1-207ENST00000494185 FBLL1A6NHQ2 334 aaKnown RBP1.96□□□□□ -2.1
LMNB1-207ENST00000494185 ACOD1A6NK06 481 aa1.96□□□□□ -2.1
LMNB1-207ENST00000494185 SHISA7A6NL88 538 aa1.96□□□□□ -2.1
LMNB1-207ENST00000494185 WASH3PC4AMC7 463 aa1.96□□□□□ -2.1
LMNB1-207ENST00000494185 LMO7DNF2Z398 122 aa1.96□□□□□ -2.1
LMNB1-207ENST00000494185 PPIAL4DF5H284 164 aa1.96□□□□□ -2.1
LMNB1-207ENST00000494185 NPIPB9F8W1W9 429 aa1.96□□□□□ -2.1
LMNB1-207ENST00000494185 H0Y8G0 127 aa1.96□□□□□ -2.1
LMNB1-207ENST00000494185 CTAGE5O15320 804 aa1.96□□□□□ -2.1
LMNB1-207ENST00000494185 KIAA0513O60268 411 aa1.96□□□□□ -2.1
LMNB1-207ENST00000494185 ECE2O60344 883 aa1.96□□□□□ -2.1
LMNB1-207ENST00000494185 TSPAN2O60636 221 aa1.96□□□□□ -2.1
LMNB1-207ENST00000494185 SH3BGRLO75368 114 aa1.96□□□□□ -2.1
LMNB1-207ENST00000494185 ANGPTL1O95841 491 aa1.96□□□□□ -2.1
LMNB1-207ENST00000494185 CA3P07451 260 aa1.96□□□□□ -2.1
LMNB1-207ENST00000494185 EDNRAP25101 427 aa1.96□□□□□ -2.1
LMNB1-207ENST00000494185 PSMA2P25787 234 aa1.96□□□□□ -2.1
LMNB1-207ENST00000494185 MAT2AP31153 395 aaKnown RBP1.96□□□□□ -2.1
LMNB1-207ENST00000494185 CHI3L1P36222 383 aaPredicted RBP1.96□□□□□ -2.1
LMNB1-207ENST00000494185 FEN1P39748 380 aaKnown RBP1.96□□□□□ -2.1
LMNB1-207ENST00000494185 ZFP36L2P47974 494 aaKnown RBP1.96□□□□□ -2.1
LMNB1-207ENST00000494185 TDO2P48775 406 aa1.96□□□□□ -2.1
LMNB1-207ENST00000494185 DHPSP49366 369 aaPredicted RBP1.96□□□□□ -2.1
LMNB1-207ENST00000494185 PPT1P50897 306 aa1.96□□□□□ -2.1
LMNB1-207ENST00000494185 CRYBA2P53672 197 aa1.96□□□□□ -2.1
LMNB1-207ENST00000494185 CBX1P83916 185 aa1.96□□□□□ -2.1
LMNB1-207ENST00000494185 PAX8Q06710 450 aa1.96□□□□□ -2.1
LMNB1-207ENST00000494185 DDX39BQ13838 428 aaKnown RBP1.96□□□□□ -2.1
LMNB1-207ENST00000494185 KLF5Q13887 457 aaPredicted RBP1.96□□□□□ -2.1
LMNB1-207ENST00000494185 BTG3Q14201 252 aaPredicted RBP1.96□□□□□ -2.1
LMNB1-207ENST00000494185 RFTN1Q14699 578 aaPredicted RBP1.96□□□□□ -2.1
LMNB1-207ENST00000494185 FAM189A2Q15884 450 aa1.96□□□□□ -2.1
LMNB1-207ENST00000494185 CLPPQ16740 277 aaPredicted RBP1.96□□□□□ -2.1
LMNB1-207ENST00000494185 PARP6Q2NL67 630 aa1.96□□□□□ -2.1
LMNB1-207ENST00000494185 RHBDD2Q6NTF9 364 aa1.96□□□□□ -2.1
LMNB1-207ENST00000494185 WASH2PQ6VEQ5 465 aa1.96□□□□□ -2.1
LMNB1-207ENST00000494185 ZYG11AQ6WRX3 759 aa1.96□□□□□ -2.1
LMNB1-207ENST00000494185 DPY19L2P2Q6ZN68 376 aa1.96□□□□□ -2.1
LMNB1-207ENST00000494185 GDPGP1Q6ZNW5 385 aa1.96□□□□□ -2.1
LMNB1-207ENST00000494185 Q6ZRG5 221 aa1.96□□□□□ -2.1
LMNB1-207ENST00000494185 Q6ZVQ6 151 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms