RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 C21orf58P58505 322 aa13.07□□□□□ -0.32
HDAC1-206ENST00000476391 RAB8AP61006 207 aa13.07□□□□□ -0.32
HDAC1-206ENST00000476391 SHC2P98077 582 aa13.07□□□□□ -0.32
HDAC1-206ENST00000476391 SNTB2Q13425 540 aaKnown RBP13.07□□□□□ -0.32
HDAC1-206ENST00000476391 BOP1Q14137 746 aaKnown RBP13.07□□□□□ -0.32
HDAC1-206ENST00000476391 SLC16A13Q7RTY0 426 aa13.07□□□□□ -0.32
HDAC1-206ENST00000476391 SYT12Q8IV01 421 aa13.07□□□□□ -0.32
HDAC1-206ENST00000476391 PIANPQ8IYJ0 282 aa13.07□□□□□ -0.32
HDAC1-206ENST00000476391 SAMD12Q8N8I0 201 aa13.07□□□□□ -0.32
HDAC1-206ENST00000476391 ZNF485Q8NCK3 441 aa13.07□□□□□ -0.32
HDAC1-206ENST00000476391 APOLD1Q96LR9 279 aa13.07□□□□□ -0.32
HDAC1-206ENST00000476391 ZNF582Q96NG8 517 aaPredicted RBP13.07□□□□□ -0.32
HDAC1-206ENST00000476391 ZNF285Q96NJ3 590 aa13.07□□□□□ -0.32
HDAC1-206ENST00000476391 OR2A7Q96R45 310 aa13.07□□□□□ -0.32
HDAC1-206ENST00000476391 CMSS1Q9BQ75 279 aaKnown RBP13.07□□□□□ -0.32
HDAC1-206ENST00000476391 TMED9Q9BVK6 235 aa13.07□□□□□ -0.32
HDAC1-206ENST00000476391 IFT27Q9BW83 186 aa13.07□□□□□ -0.32
HDAC1-206ENST00000476391 EXOSC3Q9NQT5 275 aaKnown RBP13.07□□□□□ -0.32
HDAC1-206ENST00000476391 CFAP97Q9P2B7 532 aa13.07□□□□□ -0.32
HDAC1-206ENST00000476391 CHURC1-FNTBB4DL54 471 aa13.07□□□□□ -0.32
HDAC1-206ENST00000476391 EFCAB14O75071 495 aa13.07□□□□□ -0.32
HDAC1-206ENST00000476391 ZNF3P17036 446 aa13.07□□□□□ -0.32
HDAC1-206ENST00000476391 PTGER3P43115 390 aa13.07□□□□□ -0.32
HDAC1-206ENST00000476391 LILRA4P59901 499 aa13.07□□□□□ -0.32
HDAC1-206ENST00000476391 ZNF660Q6AZW8 331 aaPredicted RBP13.07□□□□□ -0.32
HDAC1-206ENST00000476391 DHRS7BQ6IAN0 325 aaPredicted RBP13.07□□□□□ -0.32
HDAC1-206ENST00000476391 SULF1Q8IWU6 871 aa13.07□□□□□ -0.32
HDAC1-206ENST00000476391 BPIFCQ8NFQ6 507 aa13.07□□□□□ -0.32
HDAC1-206ENST00000476391 KAT2AQ92830 837 aa13.07□□□□□ -0.32
HDAC1-206ENST00000476391 PSMG2Q969U7 264 aa13.07□□□□□ -0.32
HDAC1-206ENST00000476391 LRR1Q96L50 414 aa13.07□□□□□ -0.32
HDAC1-206ENST00000476391 TRIB3Q96RU7 358 aa13.07□□□□□ -0.32
HDAC1-206ENST00000476391 TCEAL7Q9BRU2 100 aa13.07□□□□□ -0.32
HDAC1-206ENST00000476391 ARL6Q9H0F7 186 aa13.07□□□□□ -0.32
HDAC1-206ENST00000476391 WDR26Q9H7D7 661 aa13.07□□□□□ -0.32
HDAC1-206ENST00000476391 TBC1D17Q9HA65 648 aa13.07□□□□□ -0.32
HDAC1-206ENST00000476391 TAS2R3Q9NYW6 316 aa13.07□□□□□ -0.32
HDAC1-206ENST00000476391 TVP23BQ9NYZ1 205 aa13.07□□□□□ -0.32
HDAC1-206ENST00000476391 SLC22A7Q9Y694 548 aa13.07□□□□□ -0.32
HDAC1-206ENST00000476391 MRPL42Q9Y6G3 142 aaKnown RBP13.07□□□□□ -0.32
HDAC1-206ENST00000476391 OR2M5A3KFT3 312 aa13.06□□□□□ -0.32
HDAC1-206ENST00000476391 SCAMP1O15126 338 aa13.06□□□□□ -0.32
HDAC1-206ENST00000476391 MID1O15344 667 aa13.06□□□□□ -0.32
HDAC1-206ENST00000476391 SIGLEC5O15389 551 aa13.06□□□□□ -0.32
HDAC1-206ENST00000476391 CHST10O43529 356 aa13.06□□□□□ -0.32
HDAC1-206ENST00000476391 SERPINA3P01011 423 aa13.06□□□□□ -0.32
HDAC1-206ENST00000476391 HIST1H2ABP04908 130 aa13.06□□□□□ -0.32
HDAC1-206ENST00000476391 MAPK3P27361 379 aaPredicted RBP13.06□□□□□ -0.32
HDAC1-206ENST00000476391 PITPNAQ00169 270 aa13.06□□□□□ -0.32
HDAC1-206ENST00000476391 ACSM1Q08AH1 577 aa13.06□□□□□ -0.32
HDAC1-206ENST00000476391 SIGLEC14Q08ET2 396 aa13.06□□□□□ -0.32
HDAC1-206ENST00000476391 GGTA1PQ4G0N0 100 aa13.06□□□□□ -0.32
HDAC1-206ENST00000476391 SYTL3Q4VX76 610 aa13.06□□□□□ -0.32
HDAC1-206ENST00000476391 CRB2Q5IJ48 1285 aa13.06□□□□□ -0.32
HDAC1-206ENST00000476391 AVPI1Q5T686 147 aa13.06□□□□□ -0.32
HDAC1-206ENST00000476391 SLC30A6Q6NXT4 461 aa13.06□□□□□ -0.32
HDAC1-206ENST00000476391 UQCC3Q6UW78 93 aa13.06□□□□□ -0.32
HDAC1-206ENST00000476391 Q6ZTK2 550 aa13.06□□□□□ -0.32
HDAC1-206ENST00000476391 HIST3H2AQ7L7L0 130 aa13.06□□□□□ -0.32
HDAC1-206ENST00000476391 GLT6D1Q7Z4J2 308 aa13.06□□□□□ -0.32
HDAC1-206ENST00000476391 GNPDA2Q8TDQ7 276 aa13.06□□□□□ -0.32
HDAC1-206ENST00000476391 HIST1H2ACQ93077 130 aa13.06□□□□□ -0.32
HDAC1-206ENST00000476391 FUBP3Q96I24 572 aaKnown RBP eCLIP13.06□□□□□ -0.32
HDAC1-206ENST00000476391 GJD4Q96KN9 370 aaPredicted RBP13.06□□□□□ -0.32
HDAC1-206ENST00000476391 ABCG8Q9H221 673 aa13.06□□□□□ -0.32
HDAC1-206ENST00000476391 TMEM30AQ9NV96 361 aa13.06□□□□□ -0.32
HDAC1-206ENST00000476391 MIOXQ9UGB7 285 aa13.06□□□□□ -0.32
HDAC1-206ENST00000476391 DOCK4Q8N1I0 1966 aa13.06□□□□□ -0.32
HDAC1-206ENST00000476391 EFCAB7A8K855 629 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 ARHGEF33A8MVX0 844 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 DISC1C4P0D8 188 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 SC5DO75845 299 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 UBL3O95164 117 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 IGFBP1P08833 259 aaPredicted RBP13.05□□□□□ -0.32
HDAC1-206ENST00000476391 CD3GP09693 182 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 PRF1P14222 555 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 CTSCP53634 463 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 DCDP81605 110 aaKnown RBP13.05□□□□□ -0.32
HDAC1-206ENST00000476391 SCARB2Q14108 478 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 SEC23BQ15437 767 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 ELP2Q6IA86 826 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 TMEM88Q6PEY1 159 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 USP53Q70EK8 1073 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 LDLRAD3Q86YD5 345 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 SPAG16Q8N0X2 631 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 ZFP41Q8N8Y5 198 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 CHST13Q8NET6 341 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 ELP4Q96EB1 424 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 PCED1BQ96HM7 432 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 RBM14Q96PK6 669 aaKnown RBP13.05□□□□□ -0.32
HDAC1-206ENST00000476391 BBS4Q96RK4 519 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 MNTQ99583 582 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 TSNAXQ99598 290 aaKnown RBP13.05□□□□□ -0.32
HDAC1-206ENST00000476391 CRB3Q9BUF7 120 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 PAPOLGQ9BWT3 736 aaKnown RBP13.05□□□□□ -0.32
HDAC1-206ENST00000476391 POLR2J3Q9H1A7 115 aaKnown RBP13.05□□□□□ -0.32
HDAC1-206ENST00000476391 UCK1Q9HA47 277 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 BEX1Q9HBH7 125 aa13.05□□□□□ -0.32
HDAC1-206ENST00000476391 TEX10Q9NXF1 929 aaPredicted RBP13.05□□□□□ -0.32
HDAC1-206ENST00000476391 ZNF282Q9UDV7 671 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms