RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 NDUFAF5Q5TEU4 345 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 KHDRBS2Q5VWX1 349 aaKnown RBP4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 GRHL2Q6ISB3 625 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 ZDHHC24Q6UX98 284 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 CYS1Q717R9 158 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 RPS27LQ71UM5 84 aaKnown RBP4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 TBC1D1Q86TI0 1168 aaPredicted RBP4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 ATG4DQ86TL0 474 aaPredicted RBP4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 GPR180Q86V85 440 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 TMEM200AQ86VY9 491 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 LAS2Q8IYD9 372 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 EID3Q8N140 333 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 ACBD4Q8NC06 268 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 SRFBP1Q8NEF9 429 aaKnown RBP4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 OR10G3Q8NGC4 313 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 OR5L2Q8NGL0 311 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 OR14A16Q8NHC5 309 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 FBXO25Q8TCJ0 367 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 PHOSPHO1Q8TCT1 267 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 ASB5Q8WWX0 329 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 FAM168AQ92567 244 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 RGMAQ96B86 450 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 CMTM7Q96FZ5 175 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 GAL3ST4Q96RP7 486 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 TREX2Q9BQ50 279 aaPredicted RBP4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 ERVK-6Q9BXR3 956 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 ZNF717Q9BY31 904 aaPredicted RBP4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 PITHD1Q9GZP4 211 aaPredicted RBP4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 SLC6A15Q9H2J7 730 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 LIME1Q9H400 295 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 ZDHHC11Q9H8X9 412 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 IL1RL2Q9HB29 575 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 NMRAL1Q9HBL8 299 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 C14orf119Q9NWQ9 140 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 SPRR3Q9UBC9 169 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 OPTCQ9UBM4 332 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 COPS7AQ9UBW8 275 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 ERVK-19Q9WJR5 959 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 ACOT9Q9Y305 439 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 UTP11Q9Y3A2 253 aaKnown RBP4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 ASB4Q9Y574 426 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 ANGPTL3Q9Y5C1 460 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 FAM215AQ9Y5M1 114 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 APCP25054 2843 aa4.31□□□□□ -1.72
GTF3C3-208ENST00000455546 ARID1AO14497 2285 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 A0A0A6YYD5 115 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 IQANK1A0A1B0GTG1 560 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 ZNF503-AS2A6NEH8 195 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 PPP6CO00743 305 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 BCKDKO14874 412 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 EIF3HO15372 352 aaKnown RBP eCLIP4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 KLK8O60259 260 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 OR10H2O60403 315 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 KERAO60938 352 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 ULK1O75385 1050 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 NME6O75414 186 aaPredicted RBP4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 TRAPPC6AO75865 159 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 SCELO95171 688 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 GPR75O95800 540 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 IGHG3P01860 377 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 CLPSP04118 112 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 IGKV3-11P04433 115 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 KLK1P06870 262 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 HOXD4P09016 255 aaPredicted RBP4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 GSTA2P09210 222 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 CT62P0C5K7 136 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 FAM58BPP0C7Q3 252 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 GFAPP14136 432 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 COX7A2P14406 83 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 ALOX15P16050 662 aaPredicted RBP4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 IGFBP2P18065 325 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 TSPAN8P19075 237 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 CAPN3P20807 821 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 CRABP2P29373 138 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 TYK2P29597 1187 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 CASQ1P31415 396 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 HPDP32754 393 aaPredicted RBP4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 ARL1P40616 181 aaPredicted RBP4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 ART1P52961 327 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 IST1P53990 364 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 SCAND1P57086 179 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 FBXW4P57775 412 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 KCNJ2P63252 427 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 IGLV3-21P80748 117 aaPredicted RBP4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 TNFRSF17Q02223 184 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 GUCY2DQ02846 1103 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 MYBPHQ13203 477 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 GTF2H2Q13888 395 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 E2F2Q14209 437 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 C1orf185Q5T7R7 199 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 WLSQ5T9L3 541 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 CES4AQ5XG92 561 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 FAM180BQ6P0A1 224 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 GTF2H2CQ6P1K8 395 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 OPN5Q6U736 354 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 CYP20A1Q6UW02 462 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 SYT10Q6XYQ8 523 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 B3GNT6Q6ZMB0 384 aa4.3□□□□□ -1.72
GTF3C3-208ENST00000455546 RGS9BPQ6ZS82 235 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms