RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 PCDHGB3Q9Y5G1 929 aa14.17□□□□□ -0.14
SCAF11-204ENST00000395454 PTPRBP23467 1997 aa14.16□□□□□ -0.14
SCAF11-204ENST00000395454 MYOCOSA0A1B0GUC4 107 aa14.16□□□□□ -0.14
SCAF11-204ENST00000395454 WASHC1A8K0Z3 465 aa14.16□□□□□ -0.14
SCAF11-204ENST00000395454 HYAL3O43820 417 aaPredicted RBP14.16□□□□□ -0.14
SCAF11-204ENST00000395454 SRPX2O60687 465 aaPredicted RBP14.16□□□□□ -0.14
SCAF11-204ENST00000395454 PDE9AO76083 593 aa14.16□□□□□ -0.14
SCAF11-204ENST00000395454 CCL4P13236 92 aa14.16□□□□□ -0.14
SCAF11-204ENST00000395454 ZNF10P21506 573 aaPredicted RBP14.16□□□□□ -0.14
SCAF11-204ENST00000395454 GABRA4P48169 554 aa14.16□□□□□ -0.14
SCAF11-204ENST00000395454 RPS6KA3P51812 740 aa14.16□□□□□ -0.14
SCAF11-204ENST00000395454 ARHGDIAP52565 204 aa14.16□□□□□ -0.14
SCAF11-204ENST00000395454 RAD23AP54725 363 aa14.16□□□□□ -0.14
SCAF11-204ENST00000395454 NR1H2P55055 460 aa14.16□□□□□ -0.14
SCAF11-204ENST00000395454 RPS26P62854 115 aaKnown RBP14.16□□□□□ -0.14
SCAF11-204ENST00000395454 DUSP2Q05923 314 aa14.16□□□□□ -0.14
SCAF11-204ENST00000395454 PUM1Q14671 1186 aaKnown RBP eCLIP14.16□□□□□ -0.142e-8■■■■□ 19.4
SCAF11-204ENST00000395454 SPDYE7PQ495Y7 208 aa14.16□□□□□ -0.14
SCAF11-204ENST00000395454 CYP4Z1Q86W10 505 aa14.16□□□□□ -0.14
SCAF11-204ENST00000395454 MARCH9Q86YJ5 346 aa14.16□□□□□ -0.14
SCAF11-204ENST00000395454 GALNT15Q8N3T1 639 aa14.16□□□□□ -0.14
SCAF11-204ENST00000395454 OR56A1Q8NGH5 318 aa14.16□□□□□ -0.14
SCAF11-204ENST00000395454 LIN37Q96GY3 246 aaPredicted RBP14.16□□□□□ -0.14
SCAF11-204ENST00000395454 TMEM19Q96HH6 336 aa14.16□□□□□ -0.14
SCAF11-204ENST00000395454 SLC35G5Q96KT7 338 aa14.16□□□□□ -0.14
SCAF11-204ENST00000395454 ZNF300Q96RE9 604 aaPredicted RBP14.16□□□□□ -0.14
SCAF11-204ENST00000395454 PSD2Q9BQI7 771 aa14.16□□□□□ -0.14
SCAF11-204ENST00000395454 CXorf56Q9H5V9 222 aa14.16□□□□□ -0.14
SCAF11-204ENST00000395454 SOX17Q9H6I2 414 aaPredicted RBP14.16□□□□□ -0.14
SCAF11-204ENST00000395454 SIDT1Q9NXL6 827 aaKnown RBP14.16□□□□□ -0.14
SCAF11-204ENST00000395454 FBXW2Q9UKT8 454 aa14.16□□□□□ -0.14
SCAF11-204ENST00000395454 DAPP1Q9UN19 280 aa14.16□□□□□ -0.14
SCAF11-204ENST00000395454 SAMHD1Q9Y3Z3 626 aaKnown RBP14.16□□□□□ -0.14
SCAF11-204ENST00000395454 U3KQV3 271 aa14.16□□□□□ -0.14
SCAF11-204ENST00000395454 SCN3AQ9NY46 2000 aa14.16□□□□□ -0.14
SCAF11-204ENST00000395454 A8MVJ9 347 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 ADAMDEC1O15204 470 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 JRKO75564 520 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 DNAJB5O75953 348 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 PGM3O95394 542 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 CLIC3O95833 236 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 FHP07954 510 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 IFI6P09912 130 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 MSL3P1P0C860 447 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 ITGA2P17301 1181 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 ALOX12P18054 663 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 ITIH1P19827 911 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 CD247P20963 164 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 MPIP34949 423 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 PIGAP37287 484 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 BUD31P41223 144 aaPredicted RBP14.15□□□□□ -0.14
SCAF11-204ENST00000395454 XCR1P46094 333 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 KCNAB2Q13303 367 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 C3orf38Q5JPI3 329 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 PRAMEF8Q5VWM4 474 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 PRAMEF7Q5VXH5 474 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 TNFAIP8L2Q6P589 184 aaPredicted RBP14.15□□□□□ -0.14
SCAF11-204ENST00000395454 ZNF605Q86T29 641 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 GPR135Q8IZ08 494 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 ZNF655Q8N720 491 aaPredicted RBP14.15□□□□□ -0.14
SCAF11-204ENST00000395454 CSNK1A1LQ8N752 337 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 OR4C15Q8NGM1 316 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 FBLIM1Q8WUP2 373 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 ZNF501Q96CX3 271 aaPredicted RBP14.15□□□□□ -0.14
SCAF11-204ENST00000395454 MUS81Q96NY9 551 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 BARD1Q99728 777 aaKnown RBP14.15□□□□□ -0.14
SCAF11-204ENST00000395454 BCL2L10Q9HD36 194 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 ZCCHC3Q9NUD5 404 aaKnown RBP14.15□□□□□ -0.14
SCAF11-204ENST00000395454 GIMAP4Q9NUV9 329 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 SERTAD3Q9UJW9 196 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 PSME2Q9UL46 239 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 LYVE1Q9Y5Y7 322 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 SLC22A7Q9Y694 548 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 PRAMEF27A3QJZ7 478 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 GLOD5A6NK44 160 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 POLR1CO15160 346 aaPredicted RBP14.15□□□□□ -0.14
SCAF11-204ENST00000395454 ASNA1O43681 348 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 OR2B3O76000 313 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 MFN2O95140 757 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 BMP10O95393 424 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 OPN1SWP03999 348 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 JMJD7P0C870 316 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 IGFBP5P24593 272 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 LIMS1P48059 325 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 ALDH3B2P48448 385 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 KHKP50053 298 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 ANXA11P50995 505 aaKnown RBP14.15□□□□□ -0.14
SCAF11-204ENST00000395454 HMGA2P52926 109 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 LIM2P55344 173 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 KCNC4Q03721 635 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 PPP1R8Q12972 351 aaKnown RBP14.15□□□□□ -0.14
SCAF11-204ENST00000395454 EIF3IQ13347 325 aaKnown RBP14.15□□□□□ -0.14
SCAF11-204ENST00000395454 TP53BP2Q13625 1128 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 ANKRD34AQ69YU3 496 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 BORAQ6PGQ7 559 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 TTC33Q6PID6 262 aaPredicted RBP14.15□□□□□ -0.14
SCAF11-204ENST00000395454 OFCC1Q8IZS5 231 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 BMPERQ8N8U9 685 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 PIK3C3Q8NEB9 887 aa14.15□□□□□ -0.14
SCAF11-204ENST00000395454 OR1L3Q8NH93 324 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms