RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 ANKRD28O15084 1053 aa16.52■□□□□ 0.24
PTPRU-202ENST00000373779 PTHP01270 115 aa16.52■□□□□ 0.24
PTPRU-202ENST00000373779 CHMP24386 653 aa16.52■□□□□ 0.24
PTPRU-202ENST00000373779 CTSCP53634 463 aa16.52■□□□□ 0.24
PTPRU-202ENST00000373779 POU4F2Q12837 409 aa16.52■□□□□ 0.24
PTPRU-202ENST00000373779 MLLT11Q13015 90 aaPredicted RBP16.52■□□□□ 0.24
PTPRU-202ENST00000373779 SLC5A12Q1EHB4 618 aa16.52■□□□□ 0.24
PTPRU-202ENST00000373779 CTU2Q2VPK5 515 aaKnown RBP16.52■□□□□ 0.24
PTPRU-202ENST00000373779 MPP7Q5T2T1 576 aa16.52■□□□□ 0.24
PTPRU-202ENST00000373779 ZNF767PQ75MW2 155 aa16.52■□□□□ 0.24
PTPRU-202ENST00000373779 CPXM2Q8N436 756 aa16.52■□□□□ 0.24
PTPRU-202ENST00000373779 SYT14Q8NB59 555 aa16.52■□□□□ 0.24
PTPRU-202ENST00000373779 CNIH4Q9P003 139 aa16.52■□□□□ 0.24
PTPRU-202ENST00000373779 TGM5O43548 720 aa16.52■□□□□ 0.24
PTPRU-202ENST00000373779 PCDHGA12O60330 932 aa16.52■□□□□ 0.24
PTPRU-202ENST00000373779 CSN2P05814 226 aa16.52■□□□□ 0.24
PTPRU-202ENST00000373779 DEFA5Q01523 94 aa16.52■□□□□ 0.24
PTPRU-202ENST00000373779 RAB40BQ12829 278 aa16.52■□□□□ 0.24
PTPRU-202ENST00000373779 SNTB2Q13425 540 aaKnown RBP16.52■□□□□ 0.24
PTPRU-202ENST00000373779 LCTLQ6UWM7 567 aa16.52■□□□□ 0.24
PTPRU-202ENST00000373779 PHC2Q8IXK0 858 aa16.52■□□□□ 0.24
PTPRU-202ENST00000373779 OR5AR1Q8NGP9 310 aa16.52■□□□□ 0.24
PTPRU-202ENST00000373779 SLC41A3Q96GZ6 507 aa16.52■□□□□ 0.24
PTPRU-202ENST00000373779 PPIL3Q9H2H8 161 aaKnown RBP16.52■□□□□ 0.24
PTPRU-202ENST00000373779 COPS7AQ9UBW8 275 aa16.52■□□□□ 0.24
PTPRU-202ENST00000373779 OR2AT4A6NND4 320 aa16.52■□□□□ 0.23
PTPRU-202ENST00000373779 DSC1Q08554 894 aa16.52■□□□□ 0.23
PTPRU-202ENST00000373779 NUP54Q7Z3B4 507 aa16.52■□□□□ 0.23
PTPRU-202ENST00000373779 TRMT2BQ96GJ1 504 aaKnown RBP16.52■□□□□ 0.23
PTPRU-202ENST00000373779 CERS4Q9HA82 394 aa16.52■□□□□ 0.23
PTPRU-202ENST00000373779 ASB4Q9Y574 426 aa16.52■□□□□ 0.23
PTPRU-202ENST00000373779 EVPLQ92817 2033 aa16.52■□□□□ 0.23
PTPRU-202ENST00000373779 C1SP09871 688 aa16.52■□□□□ 0.23
PTPRU-202ENST00000373779 NAA10P41227 235 aaPredicted RBP16.52■□□□□ 0.23
PTPRU-202ENST00000373779 ARMC10Q8N2F6 343 aa16.52■□□□□ 0.23
PTPRU-202ENST00000373779 CWH43Q9H720 699 aa16.52■□□□□ 0.23
PTPRU-202ENST00000373779 PLEKHA1Q9HB21 404 aa16.52■□□□□ 0.23
PTPRU-202ENST00000373779 PRELID1Q9Y255 219 aa16.52■□□□□ 0.23
PTPRU-202ENST00000373779 ZNF860A6NHJ4 632 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 ADH1BP00325 375 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 ANKRD54Q6NXT1 300 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 LINC00299Q6ZSB3 139 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 KLHDC8AQ8IYD2 350 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 C1QTNF3Q9BXJ4 246 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 P2RY12Q9H244 342 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 IL20RAQ9UHF4 553 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 KLK4Q9Y5K2 254 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 OR2A25A4D2G3 310 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 A8MU76 341 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 PSMD9O00233 223 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 ARHGAP33O14559 1287 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 PAK4O96013 591 aaPredicted RBP16.51■□□□□ 0.23
PTPRU-202ENST00000373779 GABRA3P34903 492 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 LRIT3Q3SXY7 679 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 BCL2L15Q5TBC7 163 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 CENPOQ9BU64 300 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 CACNG6Q9BXT2 260 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 TMEM150CB9EJG8 249 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 ARAFP10398 606 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 ODF4Q2M2E3 257 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 SCGB2B2Q4G0G5 96 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 SYNPOQ8N3V7 929 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 ZNF480Q8WV37 535 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 MVB12BQ9H7P6 319 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 SCDO00767 359 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 ADAM12O43184 909 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 PGFP49763 221 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 GP2P55259 537 aaKnown RBP16.51■□□□□ 0.23
PTPRU-202ENST00000373779 DHCR24Q15392 516 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 PRRT3Q5FWE3 981 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 HTR3DQ70Z44 454 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 ZNF550Q7Z398 422 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 OR56A3Q8NH54 315 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 SLC38A3Q99624 504 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 PADI2Q9Y2J8 665 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 C5orf51A6NDU8 294 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 H0YIV9 168 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 H3BSH0 61 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 IL1AP01583 271 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 S100A6P06703 90 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 RBM34P42696 430 aaKnown RBP16.51■□□□□ 0.23
PTPRU-202ENST00000373779 MLIPQ5VWP3 458 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 DPPA4Q7L190 304 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 INO80EQ8NBZ0 244 aaPredicted RBP16.51■□□□□ 0.23
PTPRU-202ENST00000373779 OR5D16Q8NGK9 328 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 ADAMTS19Q8TE59 1207 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 RELTQ969Z4 430 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 MSANTD3Q96H12 275 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 DPCDQ9BVM2 203 aaPredicted RBP16.51■□□□□ 0.23
PTPRU-202ENST00000373779 PINK1Q9BXM7 581 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 LAMP5Q9UJQ1 280 aa16.51■□□□□ 0.23
PTPRU-202ENST00000373779 ANKRD33BA6NCL7 494 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 RAB3BP20337 219 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 ATP5A1P25705 553 aaKnown RBP16.5■□□□□ 0.23
PTPRU-202ENST00000373779 ACTA2P62736 377 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 ACTG2P63267 376 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 ZNF91Q05481 1191 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 MS4A15Q8N5U1 240 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 PRRC1Q96M27 445 aa16.5■□□□□ 0.23
PTPRU-202ENST00000373779 HS6ST2Q96MM7 605 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms