RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 ABCD3P28288 659 aa16.53■□□□□ 0.24
SNRPA1-201ENST00000254193 MAPK1P28482 360 aa16.53■□□□□ 0.24
SNRPA1-201ENST00000254193 MC3RP41968 323 aa16.53■□□□□ 0.24
SNRPA1-201ENST00000254193 ASMTP46597 345 aa16.53■□□□□ 0.24
SNRPA1-201ENST00000254193 PPIAP62937 165 aaKnown RBP16.53■□□□□ 0.24
SNRPA1-201ENST00000254193 AGBL2Q5U5Z8 902 aa16.53■□□□□ 0.24
SNRPA1-201ENST00000254193 IL23RQ5VWK5 629 aa16.53■□□□□ 0.24
SNRPA1-201ENST00000254193 C1QL3Q5VWW1 255 aa16.53■□□□□ 0.24
SNRPA1-201ENST00000254193 TMEM107Q6UX40 140 aa16.53■□□□□ 0.24
SNRPA1-201ENST00000254193 GK5Q6ZS86 529 aa16.53■□□□□ 0.24
SNRPA1-201ENST00000254193 ZNF551Q7Z340 670 aaPredicted RBP16.53■□□□□ 0.24
SNRPA1-201ENST00000254193 FNDC5Q8NAU1 212 aa16.53■□□□□ 0.24
SNRPA1-201ENST00000254193 MAGED4Q96JG8 741 aa16.53■□□□□ 0.24
SNRPA1-201ENST00000254193 LCORQ96JN0 433 aaPredicted RBP16.53■□□□□ 0.24
SNRPA1-201ENST00000254193 TTTY12Q9BZ98 90 aa16.53■□□□□ 0.24
SNRPA1-201ENST00000254193 PNPOQ9NVS9 261 aa16.53■□□□□ 0.24
SNRPA1-201ENST00000254193 TUBA8Q9NY65 449 aaPredicted RBP16.53■□□□□ 0.24
SNRPA1-201ENST00000254193 CAPN14A8MX76 684 aa16.52■□□□□ 0.24
SNRPA1-201ENST00000254193 BCAS2O75934 225 aaPredicted RBP16.52■□□□□ 0.24
SNRPA1-201ENST00000254193 SNUPNO95149 360 aaKnown RBP16.52■□□□□ 0.24
SNRPA1-201ENST00000254193 H2AFXP16104 143 aaPredicted RBP16.52■□□□□ 0.24
SNRPA1-201ENST00000254193 DRD5P21918 477 aa16.52■□□□□ 0.24
SNRPA1-201ENST00000254193 PPICP45877 212 aa16.52■□□□□ 0.24
SNRPA1-201ENST00000254193 CORO7P57737 925 aa16.52■□□□□ 0.24
SNRPA1-201ENST00000254193 FOXO1Q12778 655 aa16.52■□□□□ 0.24
SNRPA1-201ENST00000254193 PDE7AQ13946 482 aa16.52■□□□□ 0.24
SNRPA1-201ENST00000254193 PTGR1Q14914 329 aa16.52■□□□□ 0.24
SNRPA1-201ENST00000254193 RPS6KA2Q15349 733 aa16.52■□□□□ 0.24
SNRPA1-201ENST00000254193 CMPK2Q5EBM0 449 aa16.52■□□□□ 0.24
SNRPA1-201ENST00000254193 DESI1Q6ICB0 168 aa16.52■□□□□ 0.24
SNRPA1-201ENST00000254193 FBXW8Q8N3Y1 598 aa16.52■□□□□ 0.24
SNRPA1-201ENST00000254193 OR52N2Q8NGI0 321 aa16.52■□□□□ 0.24
SNRPA1-201ENST00000254193 ZNF764Q96H86 408 aaPredicted RBP16.52■□□□□ 0.24
SNRPA1-201ENST00000254193 VSTM2LQ96N03 204 aa16.52■□□□□ 0.24
SNRPA1-201ENST00000254193 DEFB127Q9H1M4 99 aa16.52■□□□□ 0.24
SNRPA1-201ENST00000254193 FOLH1BQ9HBA9 442 aa16.52■□□□□ 0.24
SNRPA1-201ENST00000254193 PROK2Q9HC23 129 aa16.52■□□□□ 0.24
SNRPA1-201ENST00000254193 RYDENQ9NUL5 291 aaKnown RBP16.52■□□□□ 0.24
SNRPA1-201ENST00000254193 ARGLU1Q9NWB6 273 aaPredicted RBP16.52■□□□□ 0.24
SNRPA1-201ENST00000254193 CNIH4Q9P003 139 aa16.52■□□□□ 0.24
SNRPA1-201ENST00000254193 HAO1Q9UJM8 370 aa16.52■□□□□ 0.24
SNRPA1-201ENST00000254193 CNOT11Q9UKZ1 510 aaKnown RBP16.52■□□□□ 0.24
SNRPA1-201ENST00000254193 GPR55Q9Y2T6 319 aaPredicted RBP16.52■□□□□ 0.24
SNRPA1-201ENST00000254193 POLEQ07864 2286 aa16.52■□□□□ 0.23
SNRPA1-201ENST00000254193 ESPL1Q14674 2120 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 A0A087WV62 115 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 TRGV8A0A0C4DH27 118 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 PLOD2O00469 737 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 TP53I11O14683 189 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 PDPK1O15530 556 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 SLC19A2O60779 497 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 TBX19O60806 448 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 PDE9AO76083 593 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 GLSO94925 669 aaPredicted RBP16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 ABCB1P08183 1280 aaPredicted RBP16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 CT45A8P0DMV1 189 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 CT45A9P0DMV2 189 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 EFNA1P20827 205 aaPredicted RBP16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 DCAF7P61962 342 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 KCNJ2P63252 427 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 RBPJQ06330 500 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 PLCXD2Q0VAA5 305 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 HSPB3Q12988 150 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 C4orf17Q53FE4 359 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 CT45A2Q5DJT8 189 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 BICRALQ6AI39 1079 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 CHERPQ8IWX8 916 aaKnown RBP16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 GHDCQ8N2G8 530 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 KRTCAP2Q8N6L1 136 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 OR7A2PQ8NGA2 310 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 SPPL2AQ8TCT8 520 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 SSC4DQ8WTU2 575 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 NUDT8Q8WV74 236 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 DIO2Q92813 273 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 ELP4Q96EB1 424 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 HSPBAP1Q96EW2 488 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 BTBD9Q96Q07 612 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 NUF2Q9BZD4 464 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 AKTIPQ9H8T0 292 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 IL1RL2Q9HB29 575 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 DDX18Q9NVP1 670 aaKnown RBP16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 SH3BGRL2Q9UJC5 107 aa16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 C19orf53Q9UNZ5 99 aaPredicted RBP16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.51■□□□□ 0.23
SNRPA1-201ENST00000254193 FRG2CA6NGY1 282 aa16.5■□□□□ 0.23
SNRPA1-201ENST00000254193 ACOT7O00154 380 aa16.5■□□□□ 0.23
SNRPA1-201ENST00000254193 UPK1AO00322 258 aa16.5■□□□□ 0.23
SNRPA1-201ENST00000254193 SCAMP2O15127 329 aaKnown RBP16.5■□□□□ 0.23
SNRPA1-201ENST00000254193 ACOX3O15254 700 aa16.5■□□□□ 0.23
SNRPA1-201ENST00000254193 CDC40O60508 579 aaKnown RBP eCLIP16.5■□□□□ 0.23
SNRPA1-201ENST00000254193 SNNO75324 88 aaPredicted RBP16.5■□□□□ 0.23
SNRPA1-201ENST00000254193 ERN1O75460 977 aaKnown RBP16.5■□□□□ 0.23
SNRPA1-201ENST00000254193 PPM1BO75688 479 aa16.5■□□□□ 0.23
SNRPA1-201ENST00000254193 PRPS2P11908 318 aa16.5■□□□□ 0.23
SNRPA1-201ENST00000254193 HPCAL1P37235 193 aa16.5■□□□□ 0.23
SNRPA1-201ENST00000254193 TMED10P49755 219 aaKnown RBP16.5■□□□□ 0.23
SNRPA1-201ENST00000254193 EMX2Q04743 252 aa16.5■□□□□ 0.23
SNRPA1-201ENST00000254193 ZNF155Q12901 538 aaPredicted RBP16.5■□□□□ 0.23
SNRPA1-201ENST00000254193 TTMPQ5BVD1 217 aa16.5■□□□□ 0.23
SNRPA1-201ENST00000254193 NPSR1Q6W5P4 371 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms