RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 TceancQ3US16 359 aa13.2□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Rftn1Q6A0D4 554 aa13.2□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Pithd1Q8BWR2 211 aa13.2□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 EfhbQ8CDU5 853 aa13.2□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Olfr1391Q8VFA4 311 aa13.2□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Chmp1b2Q9CQD4 199 aa13.2□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Eef1e1Q9D1M4 174 aa13.2□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Ndufv2Q9D6J6 248 aa13.2□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Q9DAD0 168 aa13.2□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Dnajb8Q9QYI7 227 aa13.2□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Gm21833J3QPK1 500 aa13.2□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Anxa2P07356 339 aaKnown RBP13.2□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 LifP09056 203 aa13.2□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 H2-Eb2Q3UUV9 287 aa13.2□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Clcn4Q61418 747 aa13.2□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Fam72aQ8BFZ8 149 aa13.2□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Slco4a1Q8K078 723 aa13.2□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Mrgpra1Q91WW5 304 aa13.2□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Ufsp2Q99K23 461 aa13.2□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Pop7Q9DCH2 140 aa13.2□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Ighg3A0A1Y7VJN6 399 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Gm6619F6URP1 175 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Sh3yl1O08641 340 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Smad6O35182 495 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Hmgn1P18608 96 aaKnown RBP13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Gadd45aP48316 165 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Plk5Q4FZD7 595 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Slc23a3Q60850 611 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Fgfr3Q61851 801 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Olfr1308Q7TQX0 320 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Abhd13Q80UX8 337 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Kiaa0895lQ810A5 467 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 GanabQ8BHN3 944 aaKnown RBP13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Pramef8Q8CE24 480 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Faim2Q8K097 317 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Olfr666Q8VH00 318 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Capn8Q91VA3 703 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Zfp65Q91W94 390 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Pno1Q9CPS7 248 aaKnown RBP13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Stub1Q9WUD1 304 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 CitP49025 2055 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Pcdhgb8A0A140LI48 931 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Cd300ld2A2A7W0 305 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Gm21904A8HG57 180 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Wscd2D4PHA7 571 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Catsperg1E9Q355 1151 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Gm5798F7BTS7 198 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 FpgtG5E8F4 590 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Gm21866J3QMH4 180 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Cyp21P03940 487 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 DbiP31786 87 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 HnrnpkP61979 463 aaKnown RBP13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Tigd2Q0VBL1 525 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Lmf1Q3U3R4 574 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Lingo2Q3URE9 606 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Ppp2r2bQ6ZWR4 443 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Rbm11Q80YT9 238 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 SuoxQ8R086 546 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Olfr826Q8VFU6 313 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Olfr825Q8VFU7 320 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Trim2Q9ESN6 744 aaKnown RBP13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Tm9sf3Q9ET30 587 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Jph3Q9ET77 744 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Gm5788A0A1Y7VK80 144 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Olfr239A0PK55 315 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Gm5938A2AEN9 163 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Ggta1l1A2AUQ7 319 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Olfr55K7N6Q1 315 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Rdh5O55240 318 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Cacng1O70578 223 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 mt-Co3P00416 261 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Gabrb3P63080 473 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Uap1l1Q3TW96 507 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Fam117bQ3U3E2 584 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Heatr6Q6P1G0 1184 aaKnown RBP13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Olfr1085Q7TR64 313 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Vmn1r201Q8R262 300 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Ppp1r8Q8R3G1 351 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Sntg1Q925E1 517 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Mlf2Q99KX1 247 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Gtf2e2Q9D902 292 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 9530002B09RikQ9EPV7 135 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Nrxn2E9Q7X7 1710 aa13.19□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Gm13285B1AYI3 182 aa13.18□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Gm13275B1AYI8 182 aa13.18□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Zfp282E9PVC2 666 aa13.18□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Rgs7O54829 469 aa13.18□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Rln1P47932 185 aa13.18□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Cmklr1P97468 371 aa13.18□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Xkr5Q5GH66 676 aa13.18□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Fzd3Q61086 666 aa13.18□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Slc39a10Q6P5F6 833 aa13.18□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Olfr17Q7TRM9 315 aa13.18□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Gstm7Q80W21 218 aa13.18□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Slc35d3Q8BGF8 422 aa13.18□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 IfnzQ8BQT1 182 aa13.18□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Grsf1Q8C5Q4 479 aaKnown RBP13.18□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Ppp1r3bQ8C767 284 aa13.18□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Apoa5Q8C7G5 368 aa13.18□□□□□ -0.3
Pcdha1-202ENSMUST00000193839 Gm13278Q8CD73 182 aa13.18□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 45.5 ms