Protein–RNA interactions for Protein: Q80YT9

Rbm11, Splicing regulator RBM11, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm11Q80YT9 Gm25239-201ENSMUST00000174915 86 ntBASIC33.82■■■■□ 3
Rbm11Q80YT9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Rbm11Q80YT9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Rbm11Q80YT9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
Rbm11Q80YT9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Rbm11Q80YT9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Rbm11Q80YT9 Psd-208ENSMUST00000224556 2034 ntBASIC30.46■■■□□ 2.47
Rbm11Q80YT9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Rbm11Q80YT9 Gm15042-201ENSMUST00000120212 883 ntBASIC30.16■■■□□ 2.42
Rbm11Q80YT9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
Rbm11Q80YT9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Rbm11Q80YT9 Gm15045-201ENSMUST00000117359 883 ntBASIC29.62■■■□□ 2.33
Rbm11Q80YT9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Rbm11Q80YT9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.44■■■□□ 2.3
Rbm11Q80YT9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Rbm11Q80YT9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Rbm11Q80YT9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Rbm11Q80YT9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Rbm11Q80YT9 Gm24109-201ENSMUST00000175489 103 ntBASIC29.03■■■□□ 2.24
Rbm11Q80YT9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Rbm11Q80YT9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.22
Rbm11Q80YT9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
Rbm11Q80YT9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Rbm11Q80YT9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
Rbm11Q80YT9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.67■■■□□ 2.18
Rbm11Q80YT9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Rbm11Q80YT9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.56■■■□□ 2.16
Rbm11Q80YT9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
Rbm11Q80YT9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
Rbm11Q80YT9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.45■■■□□ 2.14
Rbm11Q80YT9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.33■■■□□ 2.13
Rbm11Q80YT9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Rbm11Q80YT9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Rbm11Q80YT9 Gm23366-201ENSMUST00000175022 89 ntBASIC28.29■■■□□ 2.12
Rbm11Q80YT9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Rbm11Q80YT9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Rbm11Q80YT9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Rbm11Q80YT9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Rbm11Q80YT9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Rbm11Q80YT9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Rbm11Q80YT9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
Rbm11Q80YT9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.91■■■□□ 2.06
Rbm11Q80YT9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
Rbm11Q80YT9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.77■■■□□ 2.04
Rbm11Q80YT9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.74■■■□□ 2.03
Rbm11Q80YT9 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.72■■■□□ 2.03
Rbm11Q80YT9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.03
Rbm11Q80YT9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Rbm11Q80YT9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
Rbm11Q80YT9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
Rbm11Q80YT9 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Rbm11Q80YT9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Rbm11Q80YT9 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.39■■□□□ 1.98
Rbm11Q80YT9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Rbm11Q80YT9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Rbm11Q80YT9 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Rbm11Q80YT9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.1■■□□□ 1.93
Rbm11Q80YT9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Rbm11Q80YT9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Rbm11Q80YT9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27■■□□□ 1.91
Rbm11Q80YT9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Rbm11Q80YT9 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.98■■□□□ 1.91
Rbm11Q80YT9 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Rbm11Q80YT9 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Rbm11Q80YT9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Rbm11Q80YT9 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
Rbm11Q80YT9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
Rbm11Q80YT9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.84■■□□□ 1.89
Rbm11Q80YT9 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Rbm11Q80YT9 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
Rbm11Q80YT9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.82■■□□□ 1.88
Rbm11Q80YT9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
Rbm11Q80YT9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Rbm11Q80YT9 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Rbm11Q80YT9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Rbm11Q80YT9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.65■■□□□ 1.86
Rbm11Q80YT9 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Rbm11Q80YT9 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Rbm11Q80YT9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Rbm11Q80YT9 Gm27325-201ENSMUST00000175467 74 ntBASIC26.53■■□□□ 1.84
Rbm11Q80YT9 Gm25238-201ENSMUST00000174914 89 ntBASIC26.5■■□□□ 1.83
Rbm11Q80YT9 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Rbm11Q80YT9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Rbm11Q80YT9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26.42■■□□□ 1.82
Rbm11Q80YT9 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Rbm11Q80YT9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Rbm11Q80YT9 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Rbm11Q80YT9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.33■■□□□ 1.81
Rbm11Q80YT9 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Rbm11Q80YT9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Rbm11Q80YT9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Rbm11Q80YT9 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
Rbm11Q80YT9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.26■■□□□ 1.79
Rbm11Q80YT9 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Rbm11Q80YT9 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Rbm11Q80YT9 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Rbm11Q80YT9 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Rbm11Q80YT9 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Rbm11Q80YT9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Rbm11Q80YT9 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms