RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 PigfO09101 219 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 MagP20917 626 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Nudt2P56380 147 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Tm9sf2P58021 662 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Dnaja1P63037 397 aaKnown RBP13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 CtrcQ3SYP2 268 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Brf2Q3UAW9 420 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Gm906Q3V0M1 1017 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Slc17a4Q5NCM1 492 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 AktipQ64362 292 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Znf503Q7TMA2 652 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Kcmf1Q80UY2 381 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Nrde2Q80XC6 1172 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Q810M1 233 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 EfhbQ8CDU5 853 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Rab43Q8CG50 210 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Vmn1r75Q8R289 305 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Vmn1r85Q8VIB8 308 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Pcdhgb2Q91XX7 928 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 PglsQ9CQ60 257 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Sphk2Q9JIA7 617 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Olfr49Q9Z1V0 313 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Upk1bQ9Z2C6 260 aa13.94□□□□□ -0.18
Nup88-202ENSMUST00000108530 Gm7682A0A0J9YUM1 481 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Klhl3E0CZ16 587 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Gm20390E9PZF0 267 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Slc27a6E9Q9W4 619 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Gm4141K9J7H2 306 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Olfr738L7N1X7 311 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Csnk2a2O54833 350 aaKnown RBP13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Tmco2P0C1V4 183 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Cuzd1P70412 606 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Nme2Q01768 152 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 MocosQ14CH1 862 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 H2-Eb2Q3UUV9 287 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Bhlha9Q5RJB0 231 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Cyb5d2Q5SSH8 263 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Pla2g7Q60963 440 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Trim46Q7TNM2 759 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Eif4e2Q8BMB3 245 aaKnown RBP13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Pcdhb16Q91Y03 802 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Spns3Q9D232 514 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Rrp8Q9DB85 457 aaKnown RBP13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Aldh6a1Q9EQ20 535 aaKnown RBP13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Tcea2Q9QVN7 299 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Ice1E9Q286 2241 aaKnown RBP13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Olfr601A2RS33 314 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Tgfbr3lD3YZZ2 297 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Gm3239L7N2D9 227 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Tgfb1P04202 390 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 MndaP0DOV1 425 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Myf5P24699 255 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Timm8a2Q4FZG7 97 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 PmlQ60953 885 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Ifit3Q64345 403 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Tusc1Q673H1 205 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Agfg2Q80WC7 479 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Q8BH50 245 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Ctdsp2Q8BX07 270 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Gpr152Q8BXS7 511 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Stk32cQ8QZV4 488 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Rpusd1Q8VCZ8 306 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Olfr935Q8VG16 308 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Laptm4bQ91XQ6 227 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Mrpl19Q9D338 292 aaKnown RBP13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Fezf2Q9ESP5 455 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Ccl27Q9Z1X0 120 aa13.93□□□□□ -0.18
Nup88-202ENSMUST00000108530 Ptrhd1D3Z4S3 140 aa13.92□□□□□ -0.18
Nup88-202ENSMUST00000108530 Zfp282E9PVC2 666 aa13.92□□□□□ -0.18
Nup88-202ENSMUST00000108530 Olfr605E9Q838 314 aa13.92□□□□□ -0.18
Nup88-202ENSMUST00000108530 Gm20403G3UYB0 123 aa13.92□□□□□ -0.18
Nup88-202ENSMUST00000108530 Gm11168J3QN50 228 aa13.92□□□□□ -0.18
Nup88-202ENSMUST00000108530 Fpr-s1O08790 351 aa13.92□□□□□ -0.18
Nup88-202ENSMUST00000108530 Foxd2O35392 492 aa13.92□□□□□ -0.18
Nup88-202ENSMUST00000108530 Slc6a2O55192 617 aa13.92□□□□□ -0.18
Nup88-202ENSMUST00000108530 Tulp3O88413 460 aa13.92□□□□□ -0.18
Nup88-202ENSMUST00000108530 BgnP28653 369 aa13.92□□□□□ -0.18
Nup88-202ENSMUST00000108530 PnmtP40935 295 aa13.92□□□□□ -0.18
Nup88-202ENSMUST00000108530 Jak1P52332 1153 aa13.92□□□□□ -0.18
Nup88-202ENSMUST00000108530 Rack1P68040 317 aaKnown RBP13.92□□□□□ -0.18
Nup88-202ENSMUST00000108530 TfptQ3U1J1 259 aa13.92□□□□□ -0.18
Nup88-202ENSMUST00000108530 Ankub1Q3UUE9 192 aa13.92□□□□□ -0.18
Nup88-202ENSMUST00000108530 Krt76Q3UV17 594 aaKnown RBP13.92□□□□□ -0.18
Nup88-202ENSMUST00000108530 Magee2Q52KG3 523 aa13.92□□□□□ -0.18
Nup88-202ENSMUST00000108530 Nr2f1Q60632 422 aa13.92□□□□□ -0.18
Nup88-202ENSMUST00000108530 Apex2Q68G58 516 aa13.92□□□□□ -0.18
Nup88-202ENSMUST00000108530 Olfr591Q7TRR7 314 aa13.92□□□□□ -0.18
Nup88-202ENSMUST00000108530 GgnQ80WJ1 673 aa13.92□□□□□ -0.18
Nup88-202ENSMUST00000108530 Hsfy2Q80Y37 392 aa13.92□□□□□ -0.18
Nup88-202ENSMUST00000108530 CyrenQ8BHZ5 157 aa13.92□□□□□ -0.18
Nup88-202ENSMUST00000108530 Lcmt2Q8BYR1 686 aa13.92□□□□□ -0.18
Nup88-202ENSMUST00000108530 Il17rdQ8JZL1 738 aa13.92□□□□□ -0.18
Nup88-202ENSMUST00000108530 Cnot3Q8K0V4 751 aaKnown RBP13.92□□□□□ -0.18
Nup88-202ENSMUST00000108530 Olfr1047Q8VGS0 319 aa13.92□□□□□ -0.18
Nup88-202ENSMUST00000108530 Neurl2Q9D0S4 285 aa13.92□□□□□ -0.18
Nup88-202ENSMUST00000108530 Natd1Q9DBW3 110 aa13.92□□□□□ -0.18
Nup88-202ENSMUST00000108530 Dapp1Q9QXT1 280 aa13.92□□□□□ -0.18
Nup88-202ENSMUST00000108530 SqorQ9R112 450 aa13.92□□□□□ -0.18
Nup88-202ENSMUST00000108530 Fads2Q9Z0R9 444 aaKnown RBP13.92□□□□□ -0.18
Nup88-202ENSMUST00000108530 Gm8251F6VUT6 1994 aa13.92□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 37.9 ms