Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Gm25239-201ENSMUST00000174915 86 ntBASIC38.18■■■■□ 3.7
Rab43Q8CG50 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.35■■■■□ 3.25
Rab43Q8CG50 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Rab43Q8CG50 Gm15042-201ENSMUST00000120212 883 ntBASIC33.28■■■□□ 2.92
Rab43Q8CG50 Gm24109-201ENSMUST00000175489 103 ntBASIC33.11■■■□□ 2.89
Rab43Q8CG50 Gm15045-201ENSMUST00000117359 883 ntBASIC32.48■■■□□ 2.79
Rab43Q8CG50 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Rab43Q8CG50 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
Rab43Q8CG50 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
Rab43Q8CG50 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Rab43Q8CG50 Gm23366-201ENSMUST00000175022 89 ntBASIC31.92■■■□□ 2.7
Rab43Q8CG50 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
Rab43Q8CG50 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Rab43Q8CG50 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Rab43Q8CG50 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31■■■□□ 2.55
Rab43Q8CG50 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.92■■■□□ 2.54
Rab43Q8CG50 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.77■■■□□ 2.52
Rab43Q8CG50 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.68■■■□□ 2.5
Rab43Q8CG50 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.65■■■□□ 2.5
Rab43Q8CG50 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
Rab43Q8CG50 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Rab43Q8CG50 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Rab43Q8CG50 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.43■■■□□ 2.46
Rab43Q8CG50 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Rab43Q8CG50 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Rab43Q8CG50 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Rab43Q8CG50 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Rab43Q8CG50 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.22■■■□□ 2.43
Rab43Q8CG50 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Rab43Q8CG50 Gm25238-201ENSMUST00000174914 89 ntBASIC30.14■■■□□ 2.42
Rab43Q8CG50 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.05■■■□□ 2.4
Rab43Q8CG50 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
Rab43Q8CG50 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.85■■■□□ 2.37
Rab43Q8CG50 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Rab43Q8CG50 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
Rab43Q8CG50 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.63■■■□□ 2.33
Rab43Q8CG50 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
Rab43Q8CG50 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
Rab43Q8CG50 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.39■■■□□ 2.3
Rab43Q8CG50 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
Rab43Q8CG50 Psd-208ENSMUST00000224556 2034 ntBASIC29.29■■■□□ 2.28
Rab43Q8CG50 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.27■■■□□ 2.28
Rab43Q8CG50 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.27
Rab43Q8CG50 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.26■■■□□ 2.27
Rab43Q8CG50 Gm27325-201ENSMUST00000175467 74 ntBASIC29.13■■■□□ 2.25
Rab43Q8CG50 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.06■■■□□ 2.24
Rab43Q8CG50 Gm25262-201ENSMUST00000174934 133 ntBASIC29■■■□□ 2.23
Rab43Q8CG50 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Rab43Q8CG50 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.22
Rab43Q8CG50 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
Rab43Q8CG50 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.75■■■□□ 2.19
Rab43Q8CG50 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Rab43Q8CG50 Rab21-202ENSMUST00000218831 843 ntBASIC28.71■■■□□ 2.19
Rab43Q8CG50 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Rab43Q8CG50 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.64■■■□□ 2.18
Rab43Q8CG50 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.64■■■□□ 2.18
Rab43Q8CG50 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Rab43Q8CG50 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.56■■■□□ 2.16
Rab43Q8CG50 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Rab43Q8CG50 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.46■■■□□ 2.15
Rab43Q8CG50 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.46■■■□□ 2.15
Rab43Q8CG50 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.38■■■□□ 2.13
Rab43Q8CG50 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Rab43Q8CG50 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.35■■■□□ 2.13
Rab43Q8CG50 Gm26115-201ENSMUST00000175605 87 ntBASIC28.33■■■□□ 2.13
Rab43Q8CG50 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Rab43Q8CG50 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.28■■■□□ 2.12
Rab43Q8CG50 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.26■■■□□ 2.11
Rab43Q8CG50 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Rab43Q8CG50 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.23■■■□□ 2.11
Rab43Q8CG50 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.22■■■□□ 2.11
Rab43Q8CG50 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Rab43Q8CG50 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rab43Q8CG50 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Rab43Q8CG50 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Rab43Q8CG50 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Rab43Q8CG50 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
Rab43Q8CG50 Gm8109-201ENSMUST00000194076 746 ntBASIC28.11■■■□□ 2.09
Rab43Q8CG50 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Rab43Q8CG50 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Rab43Q8CG50 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
Rab43Q8CG50 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.05■■■□□ 2.08
Rab43Q8CG50 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
Rab43Q8CG50 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.01■■■□□ 2.07
Rab43Q8CG50 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.94■■■□□ 2.06
Rab43Q8CG50 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.94■■■□□ 2.06
Rab43Q8CG50 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Rab43Q8CG50 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.86■■■□□ 2.05
Rab43Q8CG50 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.85■■■□□ 2.05
Rab43Q8CG50 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
Rab43Q8CG50 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Rab43Q8CG50 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Rab43Q8CG50 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.8■■■□□ 2.04
Rab43Q8CG50 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Rab43Q8CG50 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.75■■■□□ 2.03
Rab43Q8CG50 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Rab43Q8CG50 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Rab43Q8CG50 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.69■■■□□ 2.02
Rab43Q8CG50 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.69■■■□□ 2.02
Rab43Q8CG50 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms