RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 C19orf53Q9UNZ5 99 aaPredicted RBP9.77□□□□□ -0.85
VPS25-203ENST00000589520 MRPS33Q9Y291 106 aaKnown RBP9.77□□□□□ -0.85
VPS25-203ENST00000589520 NAALAD2Q9Y3Q0 740 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 SNX11Q9Y5W9 270 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 CSNK1G3Q9Y6M4 447 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 DOCK9Q9BZ29 2069 aa9.77□□□□□ -0.85
VPS25-203ENST00000589520 HEATR5BQ9P2D3 2071 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 LOC105369274A0A096LPK9 316 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 CCDC163A0A0D9SF12 145 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 LOC102723532A0A0G2JNH3 316 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 A0A1W2PRQ8 180 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 HYKKA2RU49 373 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 KRBA1A5PL33 1030 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 TTC36A6NLP5 189 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 B4DGG1 531 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 LMO7DNF2Z398 122 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 H3BSA7 217 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 SLC1A7O00341 560 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 P2RX6O15547 441 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 PLOD3O60568 738 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 ATP1B1P05026 303 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 PROS1P07225 676 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 H1F0P07305 194 aaKnown RBP9.76□□□□□ -0.85
VPS25-203ENST00000589520 SLC35E2P0CK97 266 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 PAX7P23759 505 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 PRKAR1BP31321 381 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 GGT2P36268 569 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 CAPZBP47756 277 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 CXCL12P48061 93 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 LSSP48449 732 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 MAN2A2P49641 1150 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 TMBIM6P55061 237 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 CDH15P55291 814 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 NXPH1P58417 271 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 CDC42P60953 191 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 RPS26P62854 115 aaKnown RBP9.76□□□□□ -0.85
VPS25-203ENST00000589520 ALDH6A1Q02252 535 aaKnown RBP9.76□□□□□ -0.85
VPS25-203ENST00000589520 RPL6Q02878 288 aaKnown RBP9.76□□□□□ -0.85
VPS25-203ENST00000589520 DYNC1I2Q13409 638 aaKnown RBP9.76□□□□□ -0.85
VPS25-203ENST00000589520 LSAMPQ13449 338 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 C1orf61Q13536 156 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 RAPSNQ13702 412 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 DGCR6Q14129 220 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 FAM53BQ14153 422 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 MAD2L1BPQ15013 274 aaPredicted RBP9.76□□□□□ -0.85
VPS25-203ENST00000589520 SYPL1Q16563 259 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 FAM214AQ32MH5 1076 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 GPAT3Q53EU6 434 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 ZNF542PQ5EBM4 170 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 FRMPD2BQ6IN97 320 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 TCTN3Q6NUS6 607 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 FAM180BQ6P0A1 224 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 DHRS4L2Q6PKH6 230 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 C16orf62Q7Z3J2 963 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 GALNT5Q7Z7M9 940 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 ERI1Q8IV48 349 aaKnown RBP9.76□□□□□ -0.85
VPS25-203ENST00000589520 P3H2Q8IVL5 708 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 MCATQ8IVS2 390 aaKnown RBP9.76□□□□□ -0.85
VPS25-203ENST00000589520 SPARTQ8N0X7 666 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 OR4N4Q8N0Y3 316 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 DNAJC22Q8N4W6 341 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 SLC5A8Q8N695 610 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 ZCCHC10Q8TBK6 192 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 LMX1AQ8TE12 382 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 PATE1Q8WXA2 126 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 KLHL6Q8WZ60 621 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 DNASE2BQ8WZ79 361 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 GIMAP5Q96F15 307 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 ZDHHC12Q96GR4 267 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 FCRL4Q96PJ5 515 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 NODALQ96S42 347 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 BARD1Q99728 777 aaKnown RBP9.76□□□□□ -0.85
VPS25-203ENST00000589520 BCL7BQ9BQE9 202 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 TMEM121BQ9BXQ6 578 aaPredicted RBP9.76□□□□□ -0.85
VPS25-203ENST00000589520 DGCR6LQ9BY27 220 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 SERHL2Q9H4I8 314 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 ANKRD19PQ9H560 264 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 DUSP21Q9H596 190 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 ARMC7Q9H6L4 198 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 POLR1BQ9H9Y6 1135 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 CXorf21Q9HAI6 301 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 POLE3Q9NRF9 147 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 ENAMQ9NRM1 1142 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 PLCL2Q9UPR0 1127 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 MYO10Q9HD67 2058 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 PKD1L2Q7Z442 2459 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 TRANK1O15050 2925 aa9.76□□□□□ -0.85
VPS25-203ENST00000589520 NUP214P35658 2090 aaPredicted RBP9.75□□□□□ -0.85
VPS25-203ENST00000589520 PRAMEF27A3QJZ7 478 aa9.75□□□□□ -0.85
VPS25-203ENST00000589520 SH3D21A4FU49 640 aa9.75□□□□□ -0.85
VPS25-203ENST00000589520 PRAMEF25A6NGN4 478 aa9.75□□□□□ -0.85
VPS25-203ENST00000589520 CYR61O00622 381 aa9.75□□□□□ -0.85
VPS25-203ENST00000589520 AQP9O43315 295 aa9.75□□□□□ -0.85
VPS25-203ENST00000589520 COQ9O75208 318 aa9.75□□□□□ -0.85
VPS25-203ENST00000589520 PRKRAO75569 313 aaKnown RBP9.75□□□□□ -0.85
VPS25-203ENST00000589520 OR6B1O95007 311 aa9.75□□□□□ -0.85
VPS25-203ENST00000589520 STATHP02808 62 aa9.75□□□□□ -0.85
VPS25-203ENST00000589520 WNT1P04628 370 aa9.75□□□□□ -0.85
VPS25-203ENST00000589520 ALPPP05187 535 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms