RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 BBS4Q96RK4 519 aa16.83■□□□□ 0.28
VEGFA-222ENST00000520948 LMF1Q96S06 567 aa16.83■□□□□ 0.28
VEGFA-222ENST00000520948 BARD1Q99728 777 aaKnown RBP16.83■□□□□ 0.28
VEGFA-222ENST00000520948 SIKE1Q9BRV8 207 aa16.83■□□□□ 0.28
VEGFA-222ENST00000520948 GLIPR2Q9H4G4 154 aa16.83■□□□□ 0.28
VEGFA-222ENST00000520948 TCF7L2Q9NQB0 619 aa16.83■□□□□ 0.28
VEGFA-222ENST00000520948 AGPAT4Q9NRZ5 378 aa16.83■□□□□ 0.28
VEGFA-222ENST00000520948 GIMAP4Q9NUV9 329 aa16.83■□□□□ 0.28
VEGFA-222ENST00000520948 FGFR1OP2Q9NVK5 253 aa16.83■□□□□ 0.28
VEGFA-222ENST00000520948 SH3BP4Q9P0V3 963 aa16.83■□□□□ 0.28
VEGFA-222ENST00000520948 ENTPD4Q9Y227 616 aa16.83■□□□□ 0.28
VEGFA-222ENST00000520948 UBDO15205 165 aa16.82■□□□□ 0.28
VEGFA-222ENST00000520948 DYRK3O43781 588 aa16.82■□□□□ 0.28
VEGFA-222ENST00000520948 LAMP1P11279 417 aa16.82■□□□□ 0.28
VEGFA-222ENST00000520948 NT5EP21589 574 aa16.82■□□□□ 0.28
VEGFA-222ENST00000520948 PTGER1P34995 402 aa16.82■□□□□ 0.28
VEGFA-222ENST00000520948 HPCAL1P37235 193 aa16.82■□□□□ 0.28
VEGFA-222ENST00000520948 MRPL19P49406 292 aaKnown RBP16.82■□□□□ 0.28
VEGFA-222ENST00000520948 MLC1Q15049 377 aa16.82■□□□□ 0.28
VEGFA-222ENST00000520948 LTB4RQ15722 352 aa16.82■□□□□ 0.28
VEGFA-222ENST00000520948 GSTA3Q16772 222 aa16.82■□□□□ 0.28
VEGFA-222ENST00000520948 TRMT12Q53H54 448 aaKnown RBP16.82■□□□□ 0.28
VEGFA-222ENST00000520948 SIRT6Q8N6T7 355 aa16.82■□□□□ 0.28
VEGFA-222ENST00000520948 ADCY4Q8NFM4 1077 aa16.82■□□□□ 0.28
VEGFA-222ENST00000520948 CIDECQ96AQ7 238 aaPredicted RBP16.82■□□□□ 0.28
VEGFA-222ENST00000520948 TESCQ96BS2 214 aa16.82■□□□□ 0.28
VEGFA-222ENST00000520948 THOC1Q96FV9 657 aaKnown RBP16.82■□□□□ 0.28
VEGFA-222ENST00000520948 TEX37Q96LM6 180 aa16.82■□□□□ 0.28
VEGFA-222ENST00000520948 DPY30Q9C005 99 aa16.82■□□□□ 0.28
VEGFA-222ENST00000520948 NPHS2Q9NP85 383 aa16.82■□□□□ 0.28
VEGFA-222ENST00000520948 ACSS1Q9NUB1 689 aaPredicted RBP16.82■□□□□ 0.28
VEGFA-222ENST00000520948 PTGFRNQ9P2B2 879 aa16.82■□□□□ 0.28
VEGFA-222ENST00000520948 ERVK-19Q9WJR5 959 aa16.82■□□□□ 0.28
VEGFA-222ENST00000520948 CREBBPQ92793 2442 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 CELSR2Q9HCU4 2923 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 CENPEQ02224 2701 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 TRBV11-1A0A0K0K1C0 115 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 PLOD2O00469 737 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 POLR3GO15318 223 aaPredicted RBP16.81■□□□□ 0.28
VEGFA-222ENST00000520948 PDPK1O15530 556 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 MAN1A2O60476 641 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 ZFAND5O76080 213 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 CBX7O95931 251 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 VIMP08670 466 aaKnown RBP16.81■□□□□ 0.28
VEGFA-222ENST00000520948 IFI6P09912 130 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 IDO1P14902 403 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 IL12AP29459 219 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 SSTR4P31391 388 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 ZFP36L2P47974 494 aaKnown RBP16.81■□□□□ 0.28
VEGFA-222ENST00000520948 GYS2P54840 703 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 UFM1P61960 85 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 RNF4P78317 190 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 DUSP8Q13202 625 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 MFAP5Q13361 173 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 PDCD4Q53EL6 469 aaKnown RBP16.81■□□□□ 0.28
VEGFA-222ENST00000520948 CPTPQ5TA50 214 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 IRAK1BP1Q5VVH5 260 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 ISLR2Q6UXK2 745 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 HSDL2Q6YN16 418 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 RPS19BP1Q86WX3 136 aaKnown RBP16.81■□□□□ 0.28
VEGFA-222ENST00000520948 C9orf40Q8IXQ3 194 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 LGI4Q8N135 537 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 VWA5B2Q8N398 1253 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 NATD1Q8N6N6 113 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 ST6GALNAC3Q8NDV1 305 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 SIMC1Q8NDZ2 872 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 OR7G1Q8NGA0 311 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 OR8J2Q8NGG1 315 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 OR9A2Q8NGT5 310 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 GRHL3Q8TE85 626 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 ERP27Q96DN0 273 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 ZNF354BQ96LW1 612 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 PRPF18Q99633 342 aaKnown RBP16.81■□□□□ 0.28
VEGFA-222ENST00000520948 CNPPD1Q9BV87 410 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 DEFB126Q9BYW3 111 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 BHLHE41Q9C0J9 482 aaPredicted RBP16.81■□□□□ 0.28
VEGFA-222ENST00000520948 CDCP1Q9H5V8 836 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 SDR39U1Q9NRG7 319 aaPredicted RBP16.81■□□□□ 0.28
VEGFA-222ENST00000520948 OSGIN2Q9Y236 505 aa16.81■□□□□ 0.28
VEGFA-222ENST00000520948 OR6C76A6NM76 312 aa16.8■□□□□ 0.28
VEGFA-222ENST00000520948 A8MUI8 341 aa16.8■□□□□ 0.28
VEGFA-222ENST00000520948 LRRTM2O43300 516 aa16.8■□□□□ 0.28
VEGFA-222ENST00000520948 PLOD3O60568 738 aa16.8■□□□□ 0.28
VEGFA-222ENST00000520948 SCN2BO60939 215 aa16.8■□□□□ 0.28
VEGFA-222ENST00000520948 SLITRK5O94991 958 aa16.8■□□□□ 0.28
VEGFA-222ENST00000520948 DDX5P17844 614 aaKnown RBP16.8■□□□□ 0.28
VEGFA-222ENST00000520948 NTSP30990 170 aa16.8■□□□□ 0.28
VEGFA-222ENST00000520948 NCBP2P52298 156 aaKnown RBP eCLIP16.8■□□□□ 0.28
VEGFA-222ENST00000520948 WNT3P56703 355 aa16.8■□□□□ 0.28
VEGFA-222ENST00000520948 MLF1P58340 268 aa16.8■□□□□ 0.28
VEGFA-222ENST00000520948 PHC1P78364 1004 aa16.8■□□□□ 0.28
VEGFA-222ENST00000520948 ACER2Q5QJU3 275 aa16.8■□□□□ 0.28
VEGFA-222ENST00000520948 C1QL3Q5VWW1 255 aa16.8■□□□□ 0.28
VEGFA-222ENST00000520948 FCRLBQ6BAA4 426 aa16.8■□□□□ 0.28
VEGFA-222ENST00000520948 OR7G2Q8NG99 324 aa16.8■□□□□ 0.28
VEGFA-222ENST00000520948 KAT2AQ92830 837 aa16.8■□□□□ 0.28
VEGFA-222ENST00000520948 OR10A5Q9H207 317 aa16.8■□□□□ 0.28
VEGFA-222ENST00000520948 ATAD3AQ9NVI7 634 aa16.8■□□□□ 0.28
VEGFA-222ENST00000520948 STMN3Q9NZ72 180 aa16.8■□□□□ 0.28
VEGFA-222ENST00000520948 COPS7AQ9UBW8 275 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms