RNA–Protein interactions for RNA: ENST00000505337.5

DHFR-203, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene DHFR, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-203ENST00000505337 PSD2Q9BQI7 771 aa23.14■■□□□ 1.3
DHFR-203ENST00000505337 GABARAPL3Q9BY60 117 aa23.14■■□□□ 1.3
DHFR-203ENST00000505337 MIR1-1HGQ9H1L0 117 aa23.14■■□□□ 1.3
DHFR-203ENST00000505337 RIBC2Q9H4K1 309 aa23.14■■□□□ 1.3
DHFR-203ENST00000505337 C3orf14Q9HBI5 128 aa23.14■■□□□ 1.3
DHFR-203ENST00000505337 ASNA1O43681 348 aa23.13■■□□□ 1.29
DHFR-203ENST00000505337 GALR3O60755 368 aaPredicted RBP23.13■■□□□ 1.29
DHFR-203ENST00000505337 NR2F1P10589 423 aa23.13■■□□□ 1.29
DHFR-203ENST00000505337 IL7RP16871 459 aa23.13■■□□□ 1.29
DHFR-203ENST00000505337 TLX1P31314 330 aaPredicted RBP23.13■■□□□ 1.29
DHFR-203ENST00000505337 YAP1P46937 504 aaKnown RBP23.13■■□□□ 1.29
DHFR-203ENST00000505337 MAN2A2P49641 1150 aa23.13■■□□□ 1.29
DHFR-203ENST00000505337 CLK3P49761 638 aaKnown RBP23.13■■□□□ 1.29
DHFR-203ENST00000505337 CRISP3P54108 245 aa23.13■■□□□ 1.29
DHFR-203ENST00000505337 TPD52P55327 224 aaPredicted RBP23.13■■□□□ 1.29
DHFR-203ENST00000505337 VSX2P58304 361 aaPredicted RBP23.13■■□□□ 1.29
DHFR-203ENST00000505337 RAPSNQ13702 412 aa23.13■■□□□ 1.29
DHFR-203ENST00000505337 LAIR2Q6ISS4 152 aa23.13■■□□□ 1.29
DHFR-203ENST00000505337 KLHL35Q6PF15 583 aa23.13■■□□□ 1.29
DHFR-203ENST00000505337 SLC36A4Q6YBV0 504 aa23.13■■□□□ 1.29
DHFR-203ENST00000505337 NUP43Q8NFH3 380 aa23.13■■□□□ 1.29
DHFR-203ENST00000505337 OR4K14Q8NGD5 310 aa23.13■■□□□ 1.29
DHFR-203ENST00000505337 OTUB1Q96FW1 271 aaPredicted RBP23.13■■□□□ 1.29
DHFR-203ENST00000505337 COL21A1Q96P44 957 aa23.13■■□□□ 1.29
DHFR-203ENST00000505337 A8MVJ9 347 aa23.13■■□□□ 1.29
DHFR-203ENST00000505337 CHRM4P08173 479 aa23.13■■□□□ 1.29
DHFR-203ENST00000505337 ZNF806P0C7X5 589 aa23.13■■□□□ 1.29
DHFR-203ENST00000505337 CDH3P22223 829 aa23.13■■□□□ 1.29
DHFR-203ENST00000505337 HMGA2P52926 109 aa23.13■■□□□ 1.29
DHFR-203ENST00000505337 SIM1P81133 766 aaPredicted RBP23.13■■□□□ 1.29
DHFR-203ENST00000505337 PRAMEF8Q5VWM4 474 aa23.13■■□□□ 1.29
DHFR-203ENST00000505337 PRAMEF7Q5VXH5 474 aa23.13■■□□□ 1.29
DHFR-203ENST00000505337 RBM44Q6ZP01 1051 aaKnown RBP23.13■■□□□ 1.29
DHFR-203ENST00000505337 USP53Q70EK8 1073 aa23.13■■□□□ 1.29
DHFR-203ENST00000505337 OR10G2Q8NGC3 310 aa23.13■■□□□ 1.29
DHFR-203ENST00000505337 ZNF354BQ96LW1 612 aa23.13■■□□□ 1.29
DHFR-203ENST00000505337 OR7D2Q96RA2 312 aa23.13■■□□□ 1.29
DHFR-203ENST00000505337 PITX2Q99697 317 aa23.13■■□□□ 1.29
DHFR-203ENST00000505337 YIPF4Q9BSR8 244 aa23.13■■□□□ 1.29
DHFR-203ENST00000505337 IL21RQ9HBE5 538 aa23.13■■□□□ 1.29
DHFR-203ENST00000505337 ACER3Q9NUN7 267 aa23.13■■□□□ 1.29
DHFR-203ENST00000505337 AQP9O43315 295 aa23.12■■□□□ 1.29
DHFR-203ENST00000505337 CRHBPP24387 322 aa23.12■■□□□ 1.29
DHFR-203ENST00000505337 XKP51811 444 aa23.12■■□□□ 1.29
DHFR-203ENST00000505337 EXOC3L2Q2M3D2 409 aa23.12■■□□□ 1.29
DHFR-203ENST00000505337 C6orf141Q5SZD1 244 aa23.12■■□□□ 1.29
DHFR-203ENST00000505337 RALGAPA1Q6GYQ0 2036 aa23.12■■□□□ 1.29
DHFR-203ENST00000505337 FAM111BQ6SJ93 734 aa23.12■■□□□ 1.29
DHFR-203ENST00000505337 PRR23CQ6ZRP0 262 aa23.12■■□□□ 1.29
DHFR-203ENST00000505337 TTC29Q8NA56 475 aaPredicted RBP23.12■■□□□ 1.29
DHFR-203ENST00000505337 SETD9Q8NE22 299 aa23.12■■□□□ 1.29
DHFR-203ENST00000505337 PROX1Q92786 737 aa23.12■■□□□ 1.29
DHFR-203ENST00000505337 KAT2AQ92830 837 aa23.12■■□□□ 1.29
DHFR-203ENST00000505337 C16orf58Q96GQ5 468 aa23.12■■□□□ 1.29
DHFR-203ENST00000505337 CCDC3Q9BQI4 270 aa23.12■■□□□ 1.29
DHFR-203ENST00000505337 BTBD2Q9BX70 525 aa23.12■■□□□ 1.29
DHFR-203ENST00000505337 DNAAF2Q9NVR5 837 aaKnown RBP23.12■■□□□ 1.29
DHFR-203ENST00000505337 SEC14L3Q9UDX4 400 aa23.12■■□□□ 1.29
DHFR-203ENST00000505337 NDRG4Q9ULP0 352 aaKnown RBP23.12■■□□□ 1.29
DHFR-203ENST00000505337 DOLKQ9UPQ8 538 aa23.12■■□□□ 1.29
DHFR-203ENST00000505337 NAALAD2Q9Y3Q0 740 aa23.12■■□□□ 1.29
DHFR-203ENST00000505337 LMO7DNF2Z398 122 aa23.11■■□□□ 1.29
DHFR-203ENST00000505337 SERPINB7O75635 380 aa23.11■■□□□ 1.29
DHFR-203ENST00000505337 CYP4B1P13584 511 aa23.11■■□□□ 1.29
DHFR-203ENST00000505337 ETS2P15036 469 aa23.11■■□□□ 1.29
DHFR-203ENST00000505337 PAX7P23759 505 aa23.11■■□□□ 1.29
DHFR-203ENST00000505337 HNRNPKP61978 463 aaKnown RBP eCLIP23.11■■□□□ 1.29
DHFR-203ENST00000505337 GNA13Q14344 377 aa23.11■■□□□ 1.29
DHFR-203ENST00000505337 SF3A2Q15428 464 aaKnown RBP23.11■■□□□ 1.29
DHFR-203ENST00000505337 MEP1AQ16819 746 aa23.11■■□□□ 1.29
DHFR-203ENST00000505337 MICAQ29983 383 aa23.11■■□□□ 1.29
DHFR-203ENST00000505337 DEFB110Q30KQ9 67 aa23.11■■□□□ 1.29
DHFR-203ENST00000505337 KRT73Q86Y46 540 aa23.11■■□□□ 1.29
DHFR-203ENST00000505337 SDR16C5Q8N3Y7 309 aa23.11■■□□□ 1.29
DHFR-203ENST00000505337 OR7G2Q8NG99 324 aa23.11■■□□□ 1.29
DHFR-203ENST00000505337 DGCR14Q96DF8 476 aaKnown RBP23.11■■□□□ 1.29
DHFR-203ENST00000505337 MS4A4EQ96PG1 132 aa23.11■■□□□ 1.29
DHFR-203ENST00000505337 ANKRA2Q9H9E1 313 aa23.11■■□□□ 1.29
DHFR-203ENST00000505337 FAM32AQ9Y421 112 aaKnown RBP23.11■■□□□ 1.29
DHFR-203ENST00000505337 HSPE1-MOB4S4R3N1 261 aa23.11■■□□□ 1.29
DHFR-203ENST00000505337 SPTBN4Q9H254 2564 aa23.11■■□□□ 1.29
DHFR-203ENST00000505337 CYR61O00622 381 aa23.11■■□□□ 1.29
DHFR-203ENST00000505337 PROS1P07225 676 aa23.11■■□□□ 1.29
DHFR-203ENST00000505337 CPMP14384 443 aa23.11■■□□□ 1.29
DHFR-203ENST00000505337 IL1RL1Q01638 556 aa23.11■■□□□ 1.29
DHFR-203ENST00000505337 CA13Q8N1Q1 262 aa23.11■■□□□ 1.29
DHFR-203ENST00000505337 DNASE2BQ8WZ79 361 aa23.11■■□□□ 1.29
DHFR-203ENST00000505337 NCSTNQ92542 709 aa23.11■■□□□ 1.29
DHFR-203ENST00000505337 FEVQ99581 238 aa23.11■■□□□ 1.29
DHFR-203ENST00000505337 LDHAL6BQ9BYZ2 381 aaPredicted RBP23.11■■□□□ 1.29
DHFR-203ENST00000505337 DSPPQ9NZW4 1301 aa23.1■■□□□ 1.29
DHFR-203ENST00000505337 ARRDC5A6NEK1 342 aa23.1■■□□□ 1.29
DHFR-203ENST00000505337 FFAR1O14842 300 aa23.1■■□□□ 1.29
DHFR-203ENST00000505337 B4GAT1O43505 415 aa23.1■■□□□ 1.29
DHFR-203ENST00000505337 SEMA7AO75326 666 aa23.1■■□□□ 1.29
DHFR-203ENST00000505337 EPHA2P29317 976 aa23.1■■□□□ 1.29
DHFR-203ENST00000505337 SOX18P35713 384 aa23.1■■□□□ 1.29
DHFR-203ENST00000505337 GABARAPL2P60520 117 aa23.1■■□□□ 1.29
DHFR-203ENST00000505337 LYSMD4Q5XG99 296 aa23.1■■□□□ 1.29
DHFR-203ENST00000505337 TCEAL6Q6IPX3 200 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms