RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 CYP4V2Q6ZWL3 525 aaPredicted RBP1.19□□□□□ -2.22
CCDC93-209ENST00000488908 CCDC191Q8NCU4 936 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 CHDHQ8NE62 594 aaPredicted RBP1.19□□□□□ -2.22
CCDC93-209ENST00000488908 UBLCP1Q8WVY7 318 aaPredicted RBP1.19□□□□□ -2.22
CCDC93-209ENST00000488908 DNASE1L2Q92874 299 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 MRPL24Q96A35 216 aaKnown RBP1.19□□□□□ -2.22
CCDC93-209ENST00000488908 RAB40CQ96S21 281 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 CDX2Q99626 313 aaPredicted RBP1.19□□□□□ -2.22
CCDC93-209ENST00000488908 NRTNQ99748 197 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 IDI2Q9BXS1 227 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 TRIM9Q9C026 710 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 LSG1Q9H089 658 aaKnown RBP1.19□□□□□ -2.22
CCDC93-209ENST00000488908 ST6GALNAC4Q9H4F1 302 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 MINDY3Q9H8M7 445 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 SLCO1C1Q9NYB5 712 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 MIS18AQ9NYP9 233 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 PLEK2Q9NYT0 353 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 CFDP1Q9UEE9 299 aaPredicted RBP1.19□□□□□ -2.22
CCDC93-209ENST00000488908 TMED7Q9Y3B3 224 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 CACNG2Q9Y698 323 aa1.19□□□□□ -2.22
CCDC93-209ENST00000488908 WWP2O00308 870 aa1.18□□□□□ -2.22
CCDC93-209ENST00000488908 SLC17A2O00624 439 aa1.18□□□□□ -2.22
CCDC93-209ENST00000488908 ABCD4O14678 606 aa1.18□□□□□ -2.22
CCDC93-209ENST00000488908 WDR46O15213 610 aaKnown RBP1.18□□□□□ -2.22
CCDC93-209ENST00000488908 SYT7O43581 403 aa1.18□□□□□ -2.22
CCDC93-209ENST00000488908 MED6O75586 246 aa1.18□□□□□ -2.22
CCDC93-209ENST00000488908 MAGP20916 626 aa1.18□□□□□ -2.22
CCDC93-209ENST00000488908 KRT20P35900 424 aa1.18□□□□□ -2.22
CCDC93-209ENST00000488908 RPS10P46783 165 aaKnown RBP1.18□□□□□ -2.22
CCDC93-209ENST00000488908 ZNF136P52737 540 aa1.18□□□□□ -2.22
CCDC93-209ENST00000488908 FKBP1BP68106 108 aa1.18□□□□□ -2.22
CCDC93-209ENST00000488908 AKAP17AQ02040 695 aaKnown RBP1.18□□□□□ -2.22
CCDC93-209ENST00000488908 CSTF1Q05048 431 aaKnown RBP1.18□□□□□ -2.22
CCDC93-209ENST00000488908 SCN1BQ07699 218 aa1.18□□□□□ -2.22
CCDC93-209ENST00000488908 DAZ2Q13117 558 aaKnown RBP1.18□□□□□ -2.22
CCDC93-209ENST00000488908 PDE7AQ13946 482 aa1.18□□□□□ -2.22
CCDC93-209ENST00000488908 ACKR1Q16570 336 aa1.18□□□□□ -2.22
CCDC93-209ENST00000488908 MS4A13Q5J8X5 152 aa1.18□□□□□ -2.22
CCDC93-209ENST00000488908 CAPN13Q6MZZ7 669 aaPredicted RBP1.18□□□□□ -2.22
CCDC93-209ENST00000488908 SPATA19Q7Z5L4 167 aa1.18□□□□□ -2.22
CCDC93-209ENST00000488908 SLFN11Q7Z7L1 901 aa1.18□□□□□ -2.22
CCDC93-209ENST00000488908 LINC01551Q86U37 167 aa1.18□□□□□ -2.22
CCDC93-209ENST00000488908 SAXO1Q8IYX7 474 aa1.18□□□□□ -2.22
CCDC93-209ENST00000488908 LSMEM1Q8N8F7 131 aa1.18□□□□□ -2.22
CCDC93-209ENST00000488908 KIAA0895Q8NCT3 520 aa1.18□□□□□ -2.22
CCDC93-209ENST00000488908 CCDC197Q8NCU1 140 aa1.18□□□□□ -2.22
CCDC93-209ENST00000488908 FBXO25Q8TCJ0 367 aa1.18□□□□□ -2.22
CCDC93-209ENST00000488908 PNPLA2Q96AD5 504 aa1.18□□□□□ -2.22
CCDC93-209ENST00000488908 GBP5Q96PP8 586 aa1.18□□□□□ -2.22
CCDC93-209ENST00000488908 RASL10BQ96S79 203 aa1.18□□□□□ -2.22
CCDC93-209ENST00000488908 SPAG8Q99932 426 aaPredicted RBP1.18□□□□□ -2.22
CCDC93-209ENST00000488908 C19orf43Q9BQ61 176 aa1.18□□□□□ -2.22
CCDC93-209ENST00000488908 DPH7Q9BTV6 452 aa1.18□□□□□ -2.22
CCDC93-209ENST00000488908 FAM129AQ9BZQ8 928 aa1.18□□□□□ -2.22
CCDC93-209ENST00000488908 Q9H3A6 140 aa1.18□□□□□ -2.22
CCDC93-209ENST00000488908 DAZ3Q9NR90 486 aaKnown RBP1.18□□□□□ -2.22
CCDC93-209ENST00000488908 ERVK-19Q9WJR5 959 aa1.18□□□□□ -2.22
CCDC93-209ENST00000488908 PRG3Q9Y2Y8 225 aaPredicted RBP1.18□□□□□ -2.22
CCDC93-209ENST00000488908 PPIAL4AQ9Y536 164 aa1.18□□□□□ -2.22
CCDC93-209ENST00000488908 A0A0G2JLM5 398 aa1.17□□□□□ -2.22
CCDC93-209ENST00000488908 GTPBP10A4D1E9 387 aaKnown RBP1.17□□□□□ -2.22
CCDC93-209ENST00000488908 HMGB1P1B2RPK0 211 aaPredicted RBP1.17□□□□□ -2.22
CCDC93-209ENST00000488908 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.17□□□□□ -2.22
CCDC93-209ENST00000488908 SLC30A4O14863 429 aa1.17□□□□□ -2.22
CCDC93-209ENST00000488908 IFIT3O14879 490 aaKnown RBP1.17□□□□□ -2.22
CCDC93-209ENST00000488908 CTDSPLO15194 276 aa1.17□□□□□ -2.22
CCDC93-209ENST00000488908 SELENOFO60613 162 aa1.17□□□□□ -2.22
CCDC93-209ENST00000488908 DKC1O60832 514 aaKnown RBP eCLIP1.17□□□□□ -2.22
CCDC93-209ENST00000488908 ANXA9O76027 345 aa1.17□□□□□ -2.22
CCDC93-209ENST00000488908 CYP11B1P15538 503 aa1.17□□□□□ -2.22
CCDC93-209ENST00000488908 GLRA1P23415 457 aa1.17□□□□□ -2.22
CCDC93-209ENST00000488908 CDKL1Q00532 357 aa1.17□□□□□ -2.22
CCDC93-209ENST00000488908 GABPAQ06546 454 aa1.17□□□□□ -2.22
CCDC93-209ENST00000488908 ARHGAP1Q07960 439 aa1.17□□□□□ -2.22
CCDC93-209ENST00000488908 DCAF4L1Q3SXM0 396 aa1.17□□□□□ -2.22
CCDC93-209ENST00000488908 Q6ZRG5 221 aa1.17□□□□□ -2.22
CCDC93-209ENST00000488908 MOB2Q70IA6 237 aa1.17□□□□□ -2.22
CCDC93-209ENST00000488908 ABHD12BQ7Z5M8 362 aaPredicted RBP1.17□□□□□ -2.22
CCDC93-209ENST00000488908 METTL23Q86XA0 190 aa1.17□□□□□ -2.22
CCDC93-209ENST00000488908 SIX6OS1Q8N1H7 587 aa1.17□□□□□ -2.22
CCDC93-209ENST00000488908 CERS5Q8N5B7 392 aa1.17□□□□□ -2.22
CCDC93-209ENST00000488908 CCDC71LQ8N9Z2 235 aa1.17□□□□□ -2.22
CCDC93-209ENST00000488908 OR10H4Q8NGA5 316 aa1.17□□□□□ -2.22
CCDC93-209ENST00000488908 NEIL3Q8TAT5 605 aa1.17□□□□□ -2.22
CCDC93-209ENST00000488908 SPATA18Q8TC71 538 aa1.17□□□□□ -2.22
CCDC93-209ENST00000488908 FAM162AQ96A26 154 aa1.17□□□□□ -2.22
CCDC93-209ENST00000488908 ULK4Q96C45 1275 aa1.17□□□□□ -2.22
CCDC93-209ENST00000488908 DHTKD1Q96HY7 919 aaPredicted RBP1.17□□□□□ -2.22
CCDC93-209ENST00000488908 FOPNLQ96NB1 174 aa1.17□□□□□ -2.22
CCDC93-209ENST00000488908 SSX3Q99909 188 aa1.17□□□□□ -2.22
CCDC93-209ENST00000488908 BAG1Q99933 345 aaPredicted RBP1.17□□□□□ -2.22
CCDC93-209ENST00000488908 NICN1Q9BSH3 213 aa1.17□□□□□ -2.22
CCDC93-209ENST00000488908 ING2Q9H160 280 aa1.17□□□□□ -2.22
CCDC93-209ENST00000488908 Q9HAA7 133 aa1.17□□□□□ -2.22
CCDC93-209ENST00000488908 ADGRL4Q9HBW9 690 aa1.17□□□□□ -2.22
CCDC93-209ENST00000488908 MRPL17Q9NRX2 175 aaKnown RBP1.17□□□□□ -2.22
CCDC93-209ENST00000488908 TEKT2Q9UIF3 430 aa1.17□□□□□ -2.22
CCDC93-209ENST00000488908 GPR132Q9UNW8 380 aa1.17□□□□□ -2.22
CCDC93-209ENST00000488908 IGLV4-69A0A075B6H9 119 aa1.16□□□□□ -2.22
CCDC93-209ENST00000488908 ATP6AP2A0A1C7CYW4 349 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms