RNA–Protein interactions for RNA: ENST00000461981.5

CLK1-207, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 3,173 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-207ENST00000461981 ZNF699Q32M78 642 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 IRAK1BP1Q5VVH5 260 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 LCN8Q6JVE9 175 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 AFTPHQ6ULP2 937 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 ALKAL2Q6UX46 152 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 EIF3MQ7L2H7 374 aaKnown RBP5.57□□□□□ -1.52
CLK1-207ENST00000461981 ENTHD1Q8IYW4 607 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 ZNF655Q8N720 491 aaPredicted RBP5.57□□□□□ -1.52
CLK1-207ENST00000461981 L3MBTL4Q8NA19 623 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 BVESQ8NE79 360 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 SLC35B2Q8TB61 432 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 GLYATL2Q8WU03 294 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 RNF139Q8WU17 664 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 TADA1Q96BN2 335 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 MS4A3Q96HJ5 214 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 UBXN10Q96LJ8 280 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 TEFMQ96QE5 360 aaKnown RBP5.57□□□□□ -1.52
CLK1-207ENST00000461981 SMOQ99835 787 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 ADAT1Q9BUB4 502 aaKnown RBP5.57□□□□□ -1.52
CLK1-207ENST00000461981 GSDMCQ9BYG8 508 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 ABCB9Q9NP78 766 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 BTNL2Q9UIR0 455 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 YARS2Q9Y2Z4 477 aaKnown RBP5.57□□□□□ -1.52
CLK1-207ENST00000461981 SLC6A5Q9Y345 797 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 PCDHB14Q9Y5E9 798 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 TMEM200CA6NKL6 621 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 KHDRBS3O75525 346 aaKnown RBP5.57□□□□□ -1.52
CLK1-207ENST00000461981 CRYBA1P05813 215 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 TSPAN19P0C672 248 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 PNLIPP16233 465 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 ITPKAP23677 461 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 MAP2K3P46734 347 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 SLC6A11P48066 632 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 NUDT6P53370 316 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 CTSCP53634 463 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 CARD18P57730 90 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 HNRNPKP61978 463 aaKnown RBP eCLIP5.57□□□□□ -1.52
CLK1-207ENST00000461981 CRADDP78560 199 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 IKZF1Q13422 519 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 USF2Q15853 346 aaPredicted RBP5.57□□□□□ -1.52
CLK1-207ENST00000461981 LPAL2Q16609 132 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 RABL3Q5HYI8 236 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 DLEU7Q6UYE1 221 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 FAM71AQ8IYT1 594 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 ANKRD52Q8NB46 1076 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 PLA2G15Q8NCC3 412 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.57□□□□□ -1.523e-7■■■□□ 17.3
CLK1-207ENST00000461981 DNAJB14Q8TBM8 379 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 COL26A1Q96A83 441 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 LRIG1Q96JA1 1093 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 HSPA12BQ96MM6 686 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 SFXN2Q96NB2 322 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 SLC22A12Q96S37 553 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 RBM4BQ9BQ04 359 aaKnown RBP5.57□□□□□ -1.52
CLK1-207ENST00000461981 RBM4Q9BWF3 364 aaKnown RBP5.57□□□□□ -1.52
CLK1-207ENST00000461981 BARHL1Q9BZE3 327 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 ZNF436Q9C0F3 470 aaPredicted RBP5.57□□□□□ -1.52
CLK1-207ENST00000461981 MED28Q9H204 178 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 LINC00597Q9H2U6 94 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 SUV39H2Q9H5I1 410 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 DDX31Q9H8H2 851 aaKnown RBP5.57□□□□□ -1.52
CLK1-207ENST00000461981 EXOSC4Q9NPD3 245 aaKnown RBP5.57□□□□□ -1.52
CLK1-207ENST00000461981 SMPD4Q9NXE4 827 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 DLGAP4Q9Y2H0 992 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 ZDBF2Q9HCK1 2354 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 CXorf65A6NEN9 183 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 URADA6NGE7 173 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 MPTX1A8MV57 137 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 G3V2L1 256 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 M0QYV0 167 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 FOXE1O00358 373 aaPredicted RBP5.57□□□□□ -1.52
CLK1-207ENST00000461981 UBDO15205 165 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 SLC16A6O15403 523 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 CHP2O43745 196 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 GPX5O75715 221 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 ATP6AP2O75787 350 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 SEMA4FO95754 770 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 CFIP05156 583 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 HOXC4P09017 264 aaPredicted RBP5.57□□□□□ -1.52
CLK1-207ENST00000461981 RHCEP18577 417 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 ATP5A1P25705 553 aaKnown RBP5.57□□□□□ -1.52
CLK1-207ENST00000461981 CASP2P42575 452 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 GLRBP48167 497 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 MAN2A2P49641 1150 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 PGGT1BP53609 377 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 PCBP4P57723 403 aaKnown RBP5.57□□□□□ -1.52
CLK1-207ENST00000461981 RPL7AP62424 266 aaKnown RBP5.57□□□□□ -1.52
CLK1-207ENST00000461981 GK2Q14410 553 aaPredicted RBP5.57□□□□□ -1.52
CLK1-207ENST00000461981 UGT8Q16880 541 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 HLA-BQ31612 363 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 GFOD2Q3B7J2 385 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 THEM4Q5T1C6 240 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 ZNF691Q5VV52 312 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 LIPNQ5VXI9 398 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 MEDAGQ5VYS4 303 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 KDM4DQ6B0I6 523 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 RGS7BPQ6MZT1 257 aaPredicted RBP5.57□□□□□ -1.52
CLK1-207ENST00000461981 FAM45BPQ6NSW5 357 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 SCARA5Q6ZMJ2 495 aa5.57□□□□□ -1.52
CLK1-207ENST00000461981 HIPK1Q86Z02 1210 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms