RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 FAPQ12884 760 aa16.17■□□□□ 0.18
SHKBP1-205ENST00000594973 TNK1Q13470 666 aa16.17■□□□□ 0.18
SHKBP1-205ENST00000594973 PDE7AQ13946 482 aa16.17■□□□□ 0.18
SHKBP1-205ENST00000594973 LAPTM4AQ15012 233 aa16.17■□□□□ 0.18
SHKBP1-205ENST00000594973 COX20Q5RI15 118 aa16.17■□□□□ 0.18
SHKBP1-205ENST00000594973 ARMC4Q5T2S8 1044 aa16.17■□□□□ 0.18
SHKBP1-205ENST00000594973 KIAA1324Q6UXG2 1013 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-205ENST00000594973 TPD52L3Q96J77 140 aa16.17■□□□□ 0.18
SHKBP1-205ENST00000594973 SLC35A5Q9BS91 424 aa16.17■□□□□ 0.18
SHKBP1-205ENST00000594973 SLC6A16Q9GZN6 736 aa16.17■□□□□ 0.18
SHKBP1-205ENST00000594973 PCBD2Q9H0N5 130 aa16.17■□□□□ 0.18
SHKBP1-205ENST00000594973 ZNF556Q9HAH1 456 aa16.17■□□□□ 0.18
SHKBP1-205ENST00000594973 NDRG4Q9ULP0 352 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-205ENST00000594973 A0A075B6Q4 140 aa16.17■□□□□ 0.18
SHKBP1-205ENST00000594973 ETFAP13804 333 aa16.17■□□□□ 0.18
SHKBP1-205ENST00000594973 RAB28P51157 221 aa16.17■□□□□ 0.18
SHKBP1-205ENST00000594973 TOR1AIP1Q5JTV8 583 aa16.17■□□□□ 0.18
SHKBP1-205ENST00000594973 FAM205BPQ63HN1 556 aa16.17■□□□□ 0.18
SHKBP1-205ENST00000594973 CREB3L2Q70SY1 520 aa16.17■□□□□ 0.18
SHKBP1-205ENST00000594973 RD3Q7Z3Z2 195 aa16.17■□□□□ 0.18
SHKBP1-205ENST00000594973 SYNPOQ8N3V7 929 aa16.17■□□□□ 0.18
SHKBP1-205ENST00000594973 HSH2DQ96JZ2 352 aa16.17■□□□□ 0.18
SHKBP1-205ENST00000594973 CEP19Q96LK0 163 aa16.17■□□□□ 0.18
SHKBP1-205ENST00000594973 RHBGQ9H310 441 aa16.17■□□□□ 0.18
SHKBP1-205ENST00000594973 RIBC2Q9H4K1 309 aa16.17■□□□□ 0.18
SHKBP1-205ENST00000594973 NIPAL2Q9H841 368 aa16.17■□□□□ 0.18
SHKBP1-205ENST00000594973 GPATCH2Q9NW75 528 aa16.17■□□□□ 0.18
SHKBP1-205ENST00000594973 C14orf119Q9NWQ9 140 aa16.17■□□□□ 0.18
SHKBP1-205ENST00000594973 AHSPQ9NZD4 102 aa16.17■□□□□ 0.18
SHKBP1-205ENST00000594973 A0A0G2JN53 185 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 ANHXE9PGG2 379 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 LCMT2O60294 686 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 MITFO75030 526 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 ACADMP11310 421 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 IL32P24001 234 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 SOAT1P35610 550 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 KRT20P35900 424 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 ALDH9A1P49189 494 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 MAPK12P53778 367 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 SIM2Q14190 667 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 TIGD6Q17RP2 521 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 CYP4Z1Q86W10 505 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 OR8H2Q8N162 312 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 OR52E1Q8NGJ3 308 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 FAM131CQ96AQ9 280 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 RHNO1Q9BSD3 238 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 MS4A8Q9BY19 250 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 ABCG4Q9H172 646 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 CHST8Q9H2A9 424 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 C3orf14Q9HBI5 128 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 VNN3Q9NY84 501 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 B3GNT2Q9NY97 397 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 RPS6KA6Q9UK32 745 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 CORO2BQ9UQ03 480 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 MAP4K5Q9Y4K4 846 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 IGKV1-8A0A0C4DH67 115 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 MYO1GB0I1T2 1018 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 BET1O15155 118 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 GPR37L1O60883 481 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 CPNE3O75131 537 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 MSL3P1P0C860 447 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 ACSL1P33121 698 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 RPL3P39023 403 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 REEP5Q00765 189 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 SLAMF1Q13291 335 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 ARMCX4Q5H9R4 360 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 FAM122CQ6P4D5 195 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 ADGRF3Q8IZF5 1079 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 MSLNLQ96KJ4 702 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 MRGPRX1Q96LB2 322 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 FYTTD1Q96QD9 318 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 CENPOQ9BU64 300 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 WDR70Q9NW82 654 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 TAAR2Q9P1P5 351 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 C5AR2Q9P296 337 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 KLHL21Q9UJP4 597 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 CFL2Q9Y281 166 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 NCKAP1Q9Y2A7 1128 aa16.16■□□□□ 0.18
SHKBP1-205ENST00000594973 A0A1W2PRB8 838 aa16.15■□□□□ 0.18
SHKBP1-205ENST00000594973 LEUTXA8MZ59 168 aa16.15■□□□□ 0.18
SHKBP1-205ENST00000594973 ALPPP05187 535 aa16.15■□□□□ 0.18
SHKBP1-205ENST00000594973 PPIBP23284 216 aaKnown RBP16.15■□□□□ 0.18
SHKBP1-205ENST00000594973 CHI3L1P36222 383 aaPredicted RBP16.15■□□□□ 0.18
SHKBP1-205ENST00000594973 CSNK1G2P78368 415 aa16.15■□□□□ 0.18
SHKBP1-205ENST00000594973 VLDLRP98155 873 aa16.15■□□□□ 0.18
SHKBP1-205ENST00000594973 LRRC74AQ0VAA2 488 aa16.15■□□□□ 0.18
SHKBP1-205ENST00000594973 UAP1L1Q3KQV9 507 aa16.15■□□□□ 0.18
SHKBP1-205ENST00000594973 KDM4DQ6B0I6 523 aa16.15■□□□□ 0.18
SHKBP1-205ENST00000594973 AHSA2Q719I0 299 aa16.15■□□□□ 0.18
SHKBP1-205ENST00000594973 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.15■□□□□ 0.18
SHKBP1-205ENST00000594973 OR2A1Q8NGT9 310 aa16.15■□□□□ 0.18
SHKBP1-205ENST00000594973 RPLP0P6Q8NHW5 317 aa16.15■□□□□ 0.18
SHKBP1-205ENST00000594973 PDXPQ96GD0 296 aa16.15■□□□□ 0.18
SHKBP1-205ENST00000594973 MACROD1Q9BQ69 325 aa16.15■□□□□ 0.18
SHKBP1-205ENST00000594973 ZNF576Q9H609 170 aa16.15■□□□□ 0.18
SHKBP1-205ENST00000594973 IL1RAPQ9NPH3 570 aa16.15■□□□□ 0.18
SHKBP1-205ENST00000594973 ERVK13-1Q9NX77 482 aa16.15■□□□□ 0.18
SHKBP1-205ENST00000594973 SNX8Q9Y5X2 465 aa16.15■□□□□ 0.18
SHKBP1-205ENST00000594973 PRSS38A1L453 326 aa16.14■□□□□ 0.18
SHKBP1-205ENST00000594973 TRIM3O75382 744 aaPredicted RBP16.14■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms