RNA–Protein interactions for RNA: ENST00000560674.5

SYNM-203, Transcript of synemin, humanhuman

TSL 1 (best) BASIC

Gene SYNM, Length 5,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-203ENST00000560674 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.09□□□□□ -0.47
SYNM-203ENST00000560674 ZFP41Q8N8Y5 198 aa12.09□□□□□ -0.47
SYNM-203ENST00000560674 WDR20Q8TBZ3 569 aa12.09□□□□□ -0.47
SYNM-203ENST00000560674 BCL7BQ9BQE9 202 aa12.09□□□□□ -0.47
SYNM-203ENST00000560674 SRA1Q9HD15 236 aaKnown RBP12.09□□□□□ -0.47
SYNM-203ENST00000560674 SLC7A11Q9UPY5 501 aa12.09□□□□□ -0.47
SYNM-203ENST00000560674 RGPD1P0DJD0 1748 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 VEGFDO43915 354 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 PORP16435 677 aaPredicted RBP12.08□□□□□ -0.48
SYNM-203ENST00000560674 STK19P49842 368 aaPredicted RBP12.08□□□□□ -0.48
SYNM-203ENST00000560674 TEX26Q8N6G2 289 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.08□□□□□ -0.48
SYNM-203ENST00000560674 OR13C3Q8NGS6 347 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 EIF5A2Q9GZV4 153 aaKnown RBP12.08□□□□□ -0.48
SYNM-203ENST00000560674 SOX30O94993 753 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 AK1P00568 194 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 APOC3P02656 99 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 SH3BP2P78314 561 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 SGCAQ16586 387 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 MS4A15Q8N5U1 240 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 SLC15A4Q8N697 577 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 HUS1BQ8NHY5 278 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 SLC22A8Q8TCC7 542 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 ZNF689Q96CS4 500 aaPredicted RBP12.08□□□□□ -0.48
SYNM-203ENST00000560674 SLC25A44Q96H78 314 aaPredicted RBP12.08□□□□□ -0.48
SYNM-203ENST00000560674 PTCHD1Q96NR3 888 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 LHPPQ9H008 270 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 PPIL3Q9H2H8 161 aaKnown RBP12.08□□□□□ -0.48
SYNM-203ENST00000560674 ROBO1Q9Y6N7 1651 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 NPIPA2E9PIF3 369 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 NPIPA3F8WFD2 350 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 CDC123O75794 336 aaPredicted RBP12.08□□□□□ -0.48
SYNM-203ENST00000560674 HTR2BP41595 481 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 GPR4P46093 362 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 ART1P52961 327 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 DHCR24Q15392 516 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 GPRIN1Q7Z2K8 1008 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 KLHDC7BQ96G42 594 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 HYLS1Q96M11 299 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 MVB12BQ9H7P6 319 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 COPZ2Q9P299 210 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 ERVK-19Q9WJR5 959 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 ADH6P28332 368 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 MTNR1AP48039 350 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 RPS21P63220 83 aaKnown RBP12.08□□□□□ -0.48
SYNM-203ENST00000560674 AADACL4Q5VUY2 407 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 MTFR2Q6P444 385 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 KBTBD6Q86V97 674 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 TMEM125Q96AQ2 219 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 CACNG6Q9BXT2 260 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 KCNS2Q9ULS6 477 aa12.08□□□□□ -0.48
SYNM-203ENST00000560674 SCO2O43819 266 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 FMO6PO60774 539 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 ADORA3P0DMS8 318 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 CAPN3P20807 821 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 GRPRP30550 384 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 SOX9P48436 509 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 RIDAP52758 137 aaKnown RBP12.07□□□□□ -0.48
SYNM-203ENST00000560674 JAG1P78504 1218 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 SIX1Q15475 284 aaPredicted RBP12.07□□□□□ -0.48
SYNM-203ENST00000560674 DEFB134Q4QY38 66 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 TMEM205Q6UW68 189 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 FAM43BQ6ZT52 329 aaPredicted RBP12.07□□□□□ -0.48
SYNM-203ENST00000560674 TSPAN33Q86UF1 283 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 SPHK2Q9NRA0 654 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 PCTPQ9UKL6 214 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 NME4O00746 187 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 ETFAP13804 333 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 GALNT1Q10472 559 aaPredicted RBP12.07□□□□□ -0.48
SYNM-203ENST00000560674 TMEM35AQ53FP2 167 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 OR52E8Q6IFG1 317 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 LRFN4Q6PJG9 635 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 ZER1Q7Z7L7 766 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 ARL14Q8N4G2 192 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 FAM46BQ96A09 425 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 SHISA4Q96DD7 197 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 PCYT2Q99447 389 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 TREX2Q9BQ50 279 aaPredicted RBP12.07□□□□□ -0.48
SYNM-203ENST00000560674 MRPL15Q9P015 296 aaKnown RBP12.07□□□□□ -0.48
SYNM-203ENST00000560674 GMEB2Q9UKD1 530 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 B8ZZF3 427 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 RAB3BP20337 219 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 SLC26A5P58743 744 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 RAB5BP61020 215 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 PLCXD2Q0VAA5 305 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 GRM2Q14416 872 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 OR4C11Q6IEV9 310 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 PDZD9Q8IXQ8 264 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 OR52N2Q8NGI0 321 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 ZNF649Q9BS31 505 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 SLC2A11Q9BYW1 496 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 ANKRD60Q9BZ19 345 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 ACOT13Q9NPJ3 140 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 GPRC5BQ9NZH0 403 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 KDM3BQ7LBC6 1761 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 TP53I11O14683 189 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 ARSDP51689 593 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 PRKXP51817 358 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 CLECL1Q8IZS7 167 aa12.07□□□□□ -0.48
SYNM-203ENST00000560674 CHDHQ8NE62 594 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms