RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 KLF13Q9Y2Y9 288 aaPredicted RBP10.23□□□□□ -0.77
DDB1-222ENST00000543627 CROCCQ5TZA2 2017 aa10.23□□□□□ -0.77
DDB1-222ENST00000543627 TRGV8A0A0C4DH27 118 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 TMEM120BA0PK00 339 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 TFECO14948 347 aaPredicted RBP10.22□□□□□ -0.77
DDB1-222ENST00000543627 NME2P1O60361 137 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 WISP2O76076 250 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 PDE9AO76083 593 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 IGKV3-11P04433 115 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 SERPINE1P05121 402 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 FGF4P08620 206 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 PCSK2P16519 638 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 DDCP20711 480 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 NME2P22392 152 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 TACR1P25103 407 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 ARRB2P32121 409 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 GALNSP34059 522 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 MPIP34949 423 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 SLC1A6P48664 564 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 UBAP2LQ14157 1087 aaKnown RBP10.22□□□□□ -0.77
DDB1-222ENST00000543627 INAQ16352 499 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 PRICKLE4Q2TBC4 344 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 PRAMEF20Q5VT98 475 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 RTL4Q6ZR62 310 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 FAM47EQ6ZV65 393 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 ZNF227Q86WZ6 799 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 TAGAPQ8N103 731 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 GOLGA6L1Q8N7Z2 621 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 ZNF781Q8N8C0 355 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 ST6GALNAC3Q8NDV1 305 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 PSD4Q8NDX1 1056 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 SIMC1Q8NDZ2 872 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 OR8K3Q8NH51 312 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 NUBPLQ8TB37 319 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 NR4A3Q92570 626 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 TUBGCP3Q96CW5 907 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 C1orf50Q9BV19 199 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 DEFB127Q9H1M4 99 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 TMBIM4Q9HC24 238 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 SSU72Q9NP77 194 aaKnown RBP10.22□□□□□ -0.77
DDB1-222ENST00000543627 ARGLU1Q9NWB6 273 aaPredicted RBP10.22□□□□□ -0.77
DDB1-222ENST00000543627 MAT2BQ9NZL9 334 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 ACTL7BQ9Y614 415 aa10.22□□□□□ -0.77
DDB1-222ENST00000543627 OR6C76A6NM76 312 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 FAM166BA8MTA8 275 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 BIRC5O15392 142 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 HS6ST1O60243 411 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 SEMA7AO75326 666 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 CLPSP04118 112 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 KITP10721 976 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 ZNF24P17028 368 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 EFNA1P20827 205 aaPredicted RBP10.21□□□□□ -0.77
DDB1-222ENST00000543627 CNR1P21554 472 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 NTSP30990 170 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 GPC1P35052 558 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 SERPINB5P36952 375 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 PIGAP37287 484 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 DNASE1L1P49184 302 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 NRG3P56975 720 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 HSF1Q00613 529 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 RBPJQ06330 500 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 FUT7Q11130 342 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 MAP4K2Q12851 820 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 EBPQ15125 230 aaKnown RBP10.21□□□□□ -0.77
DDB1-222ENST00000543627 PRSS53Q2L4Q9 553 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 MPEG1Q2M385 716 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 ATP6AP1LQ52LC2 224 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 C1QL3Q5VWW1 255 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 CES4AQ5XG92 561 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 SLC22A10Q63ZE4 541 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 FAM71E1Q6IPT2 247 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 GALNT18Q6P9A2 607 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 SZRD1Q7Z422 152 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 FAM9CQ8IZT9 166 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 LIX1Q8N485 282 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 FAM26EQ8N5C1 309 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 ZNF615Q8N8J6 731 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 FNDC5Q8NAU1 212 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 OR7G1Q8NGA0 311 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 C16orf52Q8NHV5 167 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 PPP3R2Q96LZ3 170 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 C3orf30Q96M34 536 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 ZNF681Q96N22 645 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 FRMD6Q96NE9 622 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 MYNNQ9NPC7 610 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 SACM1LQ9NTJ5 587 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 EHD3Q9NZN3 535 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 CFL2Q9Y281 166 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 CCL27Q9Y4X3 112 aa10.21□□□□□ -0.77
DDB1-222ENST00000543627 SHANK1Q9Y566 2161 aa10.21□□□□□ -0.78
DDB1-222ENST00000543627 SVILO95425 2214 aa10.21□□□□□ -0.78
DDB1-222ENST00000543627 HELZ2Q9BYK8 2649 aaKnown RBP10.2□□□□□ -0.78
DDB1-222ENST00000543627 TENM4Q6N022 2769 aa10.2□□□□□ -0.78
DDB1-222ENST00000543627 PINLYPA6NC86 204 aa10.2□□□□□ -0.78
DDB1-222ENST00000543627 TMEM114B3SHH9 223 aa10.2□□□□□ -0.78
DDB1-222ENST00000543627 LSM1O15116 133 aaKnown RBP10.2□□□□□ -0.78
DDB1-222ENST00000543627 LRRTM2O43300 516 aa10.2□□□□□ -0.78
DDB1-222ENST00000543627 ATP1B1P05026 303 aa10.2□□□□□ -0.78
DDB1-222ENST00000543627 CCL3P10147 92 aa10.2□□□□□ -0.78
DDB1-222ENST00000543627 SDC1P18827 310 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms