RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 COL28A1Q2UY09 1125 aa16.67■□□□□ 0.26
RAB40C-205ENST00000539661 RTP2Q5QGT7 225 aa16.67■□□□□ 0.26
RAB40C-205ENST00000539661 FAM205BPQ63HN1 556 aa16.67■□□□□ 0.26
RAB40C-205ENST00000539661 IKBIPQ70UQ0 350 aa16.67■□□□□ 0.26
RAB40C-205ENST00000539661 PRICKLE2Q7Z3G6 844 aa16.67■□□□□ 0.26
RAB40C-205ENST00000539661 IQCF1Q8N6M8 205 aa16.67■□□□□ 0.26
RAB40C-205ENST00000539661 CELF5Q8N6W0 485 aaKnown RBP16.67■□□□□ 0.26
RAB40C-205ENST00000539661 OR2AP1Q8NGE2 309 aa16.67■□□□□ 0.26
RAB40C-205ENST00000539661 SLC38A5Q8WUX1 472 aa16.67■□□□□ 0.26
RAB40C-205ENST00000539661 OTULINQ96BN8 352 aa16.67■□□□□ 0.26
RAB40C-205ENST00000539661 ECHDC3Q96DC8 303 aa16.67■□□□□ 0.26
RAB40C-205ENST00000539661 UBL7Q96S82 380 aaPredicted RBP16.67■□□□□ 0.26
RAB40C-205ENST00000539661 TMEM121BQ9BXQ6 578 aaPredicted RBP16.67■□□□□ 0.26
RAB40C-205ENST00000539661 MED28Q9H204 178 aa16.67■□□□□ 0.26
RAB40C-205ENST00000539661 RAF1P04049 648 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 HLA-DPB1P04440 258 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 OPRD1P41143 372 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 MAPK9P45984 424 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 SPINT3P49223 89 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 SMSP52788 366 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 ELAVL2Q12926 359 aaKnown RBP16.66■□□□□ 0.26
RAB40C-205ENST00000539661 FUT10Q6P4F1 479 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 SLC36A4Q6YBV0 504 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 LRRC56Q8IYG6 542 aaPredicted RBP16.66■□□□□ 0.26
RAB40C-205ENST00000539661 ARIH2OSQ8N7S6 290 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 SLC7A13Q8TCU3 470 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 NEURL3Q96EH8 262 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 RNFT2Q96EX2 444 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 PRR14Q9BWN1 585 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 HCSTQ9UBK5 93 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 RNF215Q9Y6U7 377 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 HELZP42694 1942 aaKnown RBP16.66■□□□□ 0.26
RAB40C-205ENST00000539661 A0A1W2PRQ8 180 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 C7orf66A4D0T2 115 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 TSC22D2O75157 780 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 ZNF821O75541 412 aaPredicted RBP16.66■□□□□ 0.26
RAB40C-205ENST00000539661 DHFRP00374 187 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 HMGA1P17096 107 aaKnown RBP16.66■□□□□ 0.26
RAB40C-205ENST00000539661 IMPA1P29218 277 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 KCNJ5P48544 419 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 TAS2R50P59544 299 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 MINDY4Q4G0A6 757 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 DEF8Q6ZN54 512 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 RFLNAQ6ZTI6 216 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 WDR34Q96EX3 536 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 SENP5Q96HI0 755 aaPredicted RBP16.66■□□□□ 0.26
RAB40C-205ENST00000539661 C17orf62Q9BQA9 187 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 MARCH5Q9NX47 278 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 BCHEP06276 602 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 AVPR1BP47901 424 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 AGFG1P52594 562 aaKnown RBP16.66■□□□□ 0.26
RAB40C-205ENST00000539661 PLA1AQ53H76 456 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 RPS26P11Q5JNZ5 115 aaPredicted RBP16.66■□□□□ 0.26
RAB40C-205ENST00000539661 TYW3Q6IPR3 259 aaKnown RBP16.66■□□□□ 0.26
RAB40C-205ENST00000539661 ZNF485Q8NCK3 441 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 LINC01599Q8WXQ3 324 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 TMEM19Q96HH6 336 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 FAM83CQ9BQN1 747 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 WACQ9BTA9 647 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 PPIL3Q9H2H8 161 aaKnown RBP16.66■□□□□ 0.26
RAB40C-205ENST00000539661 DMRT3Q9NQL9 472 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 CCDC88CQ9P219 2028 aa16.66■□□□□ 0.26
RAB40C-205ENST00000539661 A0A0A6YYJ9 748 aa16.65■□□□□ 0.26
RAB40C-205ENST00000539661 AGRPO00253 132 aa16.65■□□□□ 0.26
RAB40C-205ENST00000539661 BET1O15155 118 aa16.65■□□□□ 0.26
RAB40C-205ENST00000539661 CYBAP13498 195 aa16.65■□□□□ 0.26
RAB40C-205ENST00000539661 GALP22466 123 aa16.65■□□□□ 0.26
RAB40C-205ENST00000539661 ACSM1Q08AH1 577 aa16.65■□□□□ 0.26
RAB40C-205ENST00000539661 GPR176Q14439 515 aa16.65■□□□□ 0.26
RAB40C-205ENST00000539661 FCN2Q15485 313 aa16.65■□□□□ 0.26
RAB40C-205ENST00000539661 ACSM5Q6NUN0 579 aa16.65■□□□□ 0.26
RAB40C-205ENST00000539661 KIF18BQ86Y91 864 aa16.65■□□□□ 0.26
RAB40C-205ENST00000539661 OR8H3Q8N146 312 aa16.65■□□□□ 0.26
RAB40C-205ENST00000539661 NEIL2Q969S2 332 aa16.65■□□□□ 0.26
RAB40C-205ENST00000539661 EFCAB11Q9BUY7 163 aa16.65■□□□□ 0.26
RAB40C-205ENST00000539661 CXorf36Q9H7Y0 433 aa16.65■□□□□ 0.26
RAB40C-205ENST00000539661 ZFP64Q9NPA5 681 aa16.65■□□□□ 0.26
RAB40C-205ENST00000539661 MGAT4AQ9UM21 535 aa16.65■□□□□ 0.26
RAB40C-205ENST00000539661 KLHL18O94889 574 aa16.65■□□□□ 0.26
RAB40C-205ENST00000539661 GSTM3P21266 225 aa16.65■□□□□ 0.26
RAB40C-205ENST00000539661 STOMP27105 288 aa16.65■□□□□ 0.26
RAB40C-205ENST00000539661 MTNR1AP48039 350 aa16.65■□□□□ 0.26
RAB40C-205ENST00000539661 SNAPC1Q16533 368 aa16.65■□□□□ 0.26
RAB40C-205ENST00000539661 ENTPD8Q5MY95 495 aa16.65■□□□□ 0.26
RAB40C-205ENST00000539661 TMPRSS11BQ86T26 416 aa16.65■□□□□ 0.26
RAB40C-205ENST00000539661 WDR48Q8TAF3 677 aa16.65■□□□□ 0.26
RAB40C-205ENST00000539661 NEIL3Q8TAT5 605 aa16.65■□□□□ 0.26
RAB40C-205ENST00000539661 PHF21AQ96BD5 680 aa16.65■□□□□ 0.26
RAB40C-205ENST00000539661 ZNF607Q96SK3 696 aa16.65■□□□□ 0.26
RAB40C-205ENST00000539661 C1QTNF7Q9BXJ2 289 aa16.65■□□□□ 0.26
RAB40C-205ENST00000539661 RNF186Q9NXI6 227 aa16.65■□□□□ 0.26
RAB40C-205ENST00000539661 FBXW2Q9UKT8 454 aa16.65■□□□□ 0.26
RAB40C-205ENST00000539661 STON1Q9Y6Q2 735 aa16.65■□□□□ 0.26
RAB40C-205ENST00000539661 CHD7Q9P2D1 2997 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 DNAH14Q0VDD8 3507 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 GBAP04062 536 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 LIMS3P0CW19 117 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 LIMS4P0CW20 117 aa16.64■□□□□ 0.25
RAB40C-205ENST00000539661 ATN1P54259 1190 aaPredicted RBP16.64■□□□□ 0.25
RAB40C-205ENST00000539661 CTBP2P56545 445 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms