RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 ARHGAP12Q8IWW6 846 aa9.52□□□□□ -0.88
COL4A6-208ENST00000538570 TXNDC5Q8NBS9 432 aaKnown RBP9.52□□□□□ -0.88
COL4A6-208ENST00000538570 MAPK15Q8TD08 544 aa9.52□□□□□ -0.88
COL4A6-208ENST00000538570 SECISBP2Q96T21 854 aaKnown RBP9.52□□□□□ -0.88
COL4A6-208ENST00000538570 TMEM59LQ9UK28 342 aa9.52□□□□□ -0.88
COL4A6-208ENST00000538570 GMEB2Q9UKD1 530 aa9.52□□□□□ -0.88
COL4A6-208ENST00000538570 CLEC4EQ9ULY5 219 aa9.52□□□□□ -0.88
COL4A6-208ENST00000538570 PIGBOS1A0A0B4J2F0 54 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 CREBL2O60519 120 aaPredicted RBP9.52□□□□□ -0.89
COL4A6-208ENST00000538570 LATS1O95835 1130 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 ADH1BP00325 375 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 FGF3P11487 239 aaPredicted RBP9.52□□□□□ -0.89
COL4A6-208ENST00000538570 HOXB9P17482 250 aaPredicted RBP9.52□□□□□ -0.89
COL4A6-208ENST00000538570 GABRA3P34903 492 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 GPR143P51810 404 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 SGCAQ16586 387 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 KBTBD6Q86V97 674 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 CCDC116Q8IYX3 515 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 TWNKQ96RR1 684 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 P2RY13Q9BPV8 354 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 ASH2LQ9UBL3 628 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 PCDHB3Q9Y5E6 796 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 TMEM14AQ9Y6G1 99 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 PLIN4Q96Q06 1357 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 NR0B1P51843 470 aaKnown RBP9.52□□□□□ -0.89
COL4A6-208ENST00000538570 C6orf136Q5SQH8 315 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 PXDC1Q5TGL8 231 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 DNAAF1Q8NEP3 725 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 NELL2Q99435 816 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 FBRSL1Q9HCM7 1045 aaKnown RBP9.52□□□□□ -0.89
COL4A6-208ENST00000538570 SLC2A4RGQ9NR83 387 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 ACSL6Q9UKU0 697 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 ICKQ9UPZ9 632 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 OARD1Q9Y530 152 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 CD8B2A6NJW9 211 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 ZNF850A8MQ14 1090 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 SCGB2A1O75556 95 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 CD8BP10966 210 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 TYRP14679 529 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 ALDH3B1P43353 468 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 TMEM115Q12893 351 aaPredicted RBP9.52□□□□□ -0.89
COL4A6-208ENST00000538570 CMTM8Q8IZV2 173 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 FTMTQ8N4E7 242 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 NUP43Q8NFH3 380 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 OR8K5Q8NH50 307 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 SCLYQ96I15 445 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 SLC45A3Q96JT2 553 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 TRIB3Q96RU7 358 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 CCM2LQ9NUG4 571 aaPredicted RBP9.52□□□□□ -0.89
COL4A6-208ENST00000538570 WRAP73Q9P2S5 460 aaPredicted RBP9.52□□□□□ -0.89
COL4A6-208ENST00000538570 A0A1W2PPK0 400 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 SLC16A5O15375 505 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 KIAA0513O60268 411 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 PAHP00439 452 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 CFL1P23528 166 aaKnown RBP9.52□□□□□ -0.89
COL4A6-208ENST00000538570 NAA10P41227 235 aaPredicted RBP9.52□□□□□ -0.89
COL4A6-208ENST00000538570 COL9A3Q14050 684 aaPredicted RBP9.52□□□□□ -0.89
COL4A6-208ENST00000538570 GTF2H4Q92759 462 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 COQ10AQ96MF6 247 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 PAPOLGQ9BWT3 736 aaKnown RBP9.52□□□□□ -0.89
COL4A6-208ENST00000538570 HSD3B7Q9H2F3 369 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 C8orf33Q9H7E9 229 aaPredicted RBP9.52□□□□□ -0.89
COL4A6-208ENST00000538570 KLHL21Q9UJP4 597 aa9.52□□□□□ -0.89
COL4A6-208ENST00000538570 OR6C74A6NCV1 312 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 SOBPA7XYQ1 873 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 HCRTR2O43614 444 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 DIRAS3O95661 229 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 CSTAP01040 98 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 RAB4BP61018 213 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 MEF2AQ02078 507 aaPredicted RBP9.51□□□□□ -0.89
COL4A6-208ENST00000538570 GSG1LQ6UXU4 331 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 ZFAND4Q86XD8 727 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 C12orf45Q8N5I9 185 aaPredicted RBP9.51□□□□□ -0.89
COL4A6-208ENST00000538570 RXFP3Q9NSD7 469 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 TRBV2A0A0J9YWF9 115 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 LCKP06239 509 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 TYRP1P17643 537 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 OGDHQ02218 1023 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 SLC36A3Q495N2 470 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 SNAPC3Q92966 411 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 PGAM5Q96HS1 289 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 MSLNLQ96KJ4 702 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 CRB3Q9BUF7 120 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 A0A0G2JMP0 313 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 LRRTM2O43300 516 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 HOXB2P14652 356 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 POLR2CP19387 275 aaPredicted RBP9.51□□□□□ -0.89
COL4A6-208ENST00000538570 AK4P27144 223 aaPredicted RBP9.51□□□□□ -0.89
COL4A6-208ENST00000538570 LSSP48449 732 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 NLRP8Q86W28 1048 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 PLD6Q8N2A8 252 aaKnown RBP9.51□□□□□ -0.89
COL4A6-208ENST00000538570 TMEM151AQ8N4L1 468 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 OR4M2Q8NGB6 313 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 FAM46BQ96A09 425 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 HS6ST2Q96MM7 605 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 MEAF6Q9HAF1 191 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 PCDHGA8Q9Y5G5 932 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 EMC8O43402 210 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 RFPL3O75679 317 aa9.51□□□□□ -0.89
COL4A6-208ENST00000538570 SLC34A2O95436 690 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms