RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 TMEM114B3SHH9 223 aa11.93□□□□□ -0.5
COL5A1-206ENST00000465877 SDC1P18827 310 aa11.93□□□□□ -0.5
COL5A1-206ENST00000465877 BGNP21810 368 aa11.93□□□□□ -0.5
COL5A1-206ENST00000465877 TACR1P25103 407 aa11.93□□□□□ -0.5
COL5A1-206ENST00000465877 MST1P26927 711 aa11.93□□□□□ -0.5
COL5A1-206ENST00000465877 MEOX1P50221 254 aa11.93□□□□□ -0.5
COL5A1-206ENST00000465877 MRPS35P82673 323 aaKnown RBP11.93□□□□□ -0.5
COL5A1-206ENST00000465877 SRSF11Q05519 484 aaKnown RBP11.93□□□□□ -0.5
COL5A1-206ENST00000465877 C2orf80Q0P641 193 aa11.93□□□□□ -0.5
COL5A1-206ENST00000465877 MGAT2Q10469 447 aa11.93□□□□□ -0.5
COL5A1-206ENST00000465877 CEBPEQ15744 281 aa11.93□□□□□ -0.5
COL5A1-206ENST00000465877 UGT3A2Q3SY77 523 aa11.93□□□□□ -0.5
COL5A1-206ENST00000465877 GALNTL6Q49A17 601 aa11.93□□□□□ -0.5
COL5A1-206ENST00000465877 OPN5Q6U736 354 aa11.93□□□□□ -0.5
COL5A1-206ENST00000465877 CLEC18BQ6UXF7 455 aa11.93□□□□□ -0.5
COL5A1-206ENST00000465877 IL20RBQ6UXL0 311 aa11.93□□□□□ -0.5
COL5A1-206ENST00000465877 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.93□□□□□ -0.5
COL5A1-206ENST00000465877 SAMD14Q8IZD0 417 aaPredicted RBP11.93□□□□□ -0.5
COL5A1-206ENST00000465877 ZNF615Q8N8J6 731 aa11.93□□□□□ -0.5
COL5A1-206ENST00000465877 ZNF441Q8N8Z8 693 aa11.93□□□□□ -0.5
COL5A1-206ENST00000465877 CLEC18CQ8NCF0 446 aa11.93□□□□□ -0.5
COL5A1-206ENST00000465877 ADCY4Q8NFM4 1077 aa11.93□□□□□ -0.5
COL5A1-206ENST00000465877 OR7G1Q8NGA0 311 aa11.93□□□□□ -0.5
COL5A1-206ENST00000465877 OR9A2Q8NGT5 310 aa11.93□□□□□ -0.5
COL5A1-206ENST00000465877 DNAJB8Q8NHS0 232 aa11.93□□□□□ -0.5
COL5A1-206ENST00000465877 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.93□□□□□ -0.5
COL5A1-206ENST00000465877 ZNF675Q8TD23 568 aa11.93□□□□□ -0.5
COL5A1-206ENST00000465877 TLCD1Q96CP7 247 aa11.93□□□□□ -0.5
COL5A1-206ENST00000465877 OR10A5Q9H207 317 aa11.93□□□□□ -0.5
COL5A1-206ENST00000465877 TMBIM4Q9HC24 238 aa11.93□□□□□ -0.5
COL5A1-206ENST00000465877 SLC35C2Q9NQQ7 365 aa11.93□□□□□ -0.5
COL5A1-206ENST00000465877 DTX4Q9Y2E6 619 aa11.93□□□□□ -0.5
COL5A1-206ENST00000465877 TMED5Q9Y3A6 229 aa11.93□□□□□ -0.5
COL5A1-206ENST00000465877 C2orf92A0A1B0GVN3 265 aa11.92□□□□□ -0.5
COL5A1-206ENST00000465877 ITM2AO43736 263 aa11.92□□□□□ -0.5
COL5A1-206ENST00000465877 CBX7O95931 251 aa11.92□□□□□ -0.5
COL5A1-206ENST00000465877 ZNF24P17028 368 aa11.92□□□□□ -0.5
COL5A1-206ENST00000465877 GPX3P22352 226 aa11.92□□□□□ -0.5
COL5A1-206ENST00000465877 SOX18P35713 384 aa11.92□□□□□ -0.5
COL5A1-206ENST00000465877 GPR85P60893 370 aa11.92□□□□□ -0.5
COL5A1-206ENST00000465877 ABCE1P61221 599 aaKnown RBP11.92□□□□□ -0.5
COL5A1-206ENST00000465877 MAGOHP61326 146 aaKnown RBP11.92□□□□□ -0.5
COL5A1-206ENST00000465877 SRSF1Q07955 248 aaKnown RBP eCLIP11.92□□□□□ -0.5
COL5A1-206ENST00000465877 DUSP8Q13202 625 aa11.92□□□□□ -0.5
COL5A1-206ENST00000465877 EXOSC7Q15024 291 aaKnown RBP11.92□□□□□ -0.5
COL5A1-206ENST00000465877 EIF2S3LQ2VIR3 472 aaKnown RBP11.92□□□□□ -0.5
COL5A1-206ENST00000465877 RFTN2Q52LD8 501 aaPredicted RBP11.92□□□□□ -0.5
COL5A1-206ENST00000465877 ZNF628Q5EBL2 1059 aa11.92□□□□□ -0.5
COL5A1-206ENST00000465877 HHATQ5VTY9 493 aa11.92□□□□□ -0.5
COL5A1-206ENST00000465877 FAM111BQ6SJ93 734 aa11.92□□□□□ -0.5
COL5A1-206ENST00000465877 LYPD8Q6UX82 237 aa11.92□□□□□ -0.5
COL5A1-206ENST00000465877 RTL4Q6ZR62 310 aa11.92□□□□□ -0.5
COL5A1-206ENST00000465877 TICAM1Q8IUC6 712 aa11.92□□□□□ -0.5
COL5A1-206ENST00000465877 FAM9CQ8IZT9 166 aa11.92□□□□□ -0.5
COL5A1-206ENST00000465877 ZNF781Q8N8C0 355 aa11.92□□□□□ -0.5
COL5A1-206ENST00000465877 GOLM1Q8NBJ4 401 aa11.92□□□□□ -0.5
COL5A1-206ENST00000465877 POGLUT1Q8NBL1 392 aa11.92□□□□□ -0.5
COL5A1-206ENST00000465877 C16orf52Q8NHV5 167 aa11.92□□□□□ -0.5
COL5A1-206ENST00000465877 CTHRC1Q96CG8 243 aa11.92□□□□□ -0.5
COL5A1-206ENST00000465877 SPACA9Q96E40 222 aaPredicted RBP11.92□□□□□ -0.5
COL5A1-206ENST00000465877 EGLN2Q96KS0 407 aa11.92□□□□□ -0.5
COL5A1-206ENST00000465877 TSPAN10Q9H1Z9 355 aaPredicted RBP11.92□□□□□ -0.5
COL5A1-206ENST00000465877 GIMAP2Q9UG22 337 aa11.92□□□□□ -0.5
COL5A1-206ENST00000465877 ZNF639Q9UID6 485 aa11.92□□□□□ -0.5
COL5A1-206ENST00000465877 EXO1Q9UQ84 846 aaKnown RBP11.92□□□□□ -0.5
COL5A1-206ENST00000465877 WBP11Q9Y2W2 641 aaKnown RBP11.92□□□□□ -0.5
COL5A1-206ENST00000465877 SETXQ7Z333 2677 aaKnown RBP11.92□□□□□ -0.5
COL5A1-206ENST00000465877 SPTAN1Q13813 2472 aaKnown RBP11.92□□□□□ -0.5
COL5A1-206ENST00000465877 POLEQ07864 2286 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 A0A0G2JMM0 328 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 ATP6AP2A0A1C7CYW4 349 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 A0A1W2PPB8 328 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 A0A1W2PRS3 328 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 KIR3DP1A8MWS1 328 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 PEX1O43933 1283 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 ATP6AP2O75787 350 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 JUNP05412 331 aaKnown RBP11.91□□□□□ -0.5
COL5A1-206ENST00000465877 PCSK2P16519 638 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 S1PR1P21453 382 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 GRK2P25098 689 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 NTSP30990 170 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 NR0B1P51843 470 aaKnown RBP11.91□□□□□ -0.5
COL5A1-206ENST00000465877 ALDH6A1Q02252 535 aaKnown RBP11.91□□□□□ -0.5
COL5A1-206ENST00000465877 MAP4K2Q12851 820 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 PDCD2Q16342 344 aaPredicted RBP11.91□□□□□ -0.5
COL5A1-206ENST00000465877 NNATQ16517 81 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 PRSS53Q2L4Q9 553 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 ATP6AP1LQ52LC2 224 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 PIGGQ5H8A4 983 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 HLA-DQA1Q5Y7H0 255 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 SULF2Q8IWU5 870 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 CCDC116Q8IYX3 515 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 DND1Q8IYX4 353 aaKnown RBP11.91□□□□□ -0.5
COL5A1-206ENST00000465877 TAGAPQ8N103 731 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 FAM26EQ8N5C1 309 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 SLC15A4Q8N697 577 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 SIMC1Q8NDZ2 872 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 OR52R1Q8NGF1 315 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 CLHC1Q8NHS4 586 aa11.91□□□□□ -0.5
COL5A1-206ENST00000465877 MGARPQ8TDB4 240 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 199.3 ms