RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 SLC35C2Q9NQQ7 365 aa16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 EHD3Q9NZN3 535 aa16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 EXO1Q9UQ84 846 aaKnown RBP16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 KLF13Q9Y2Y9 288 aaPredicted RBP16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 RP1L1Q8IWN7 2480 aaPredicted RBP16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 UBR5O95071 2799 aaPredicted RBP16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 SHANK1Q9Y566 2161 aa16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 C2orf92A0A1B0GVN3 265 aa16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 CLEC18AA5D8T8 446 aa16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 LSM1O15116 133 aaKnown RBP16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 PCSK2P16519 638 aa16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 BGNP21810 368 aa16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 MEOX1P50221 254 aa16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 KCNK10P57789 538 aa16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 RPL38P63173 70 aaKnown RBP16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 MRPS35P82673 323 aaKnown RBP16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 ALDH6A1Q02252 535 aaKnown RBP16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 DUSP8Q13202 625 aa16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 UBAP2LQ14157 1087 aaKnown RBP16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 EXOSC7Q15024 291 aaKnown RBP16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 GALNTL6Q49A17 601 aa16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 TRMT12Q53H54 448 aaKnown RBP16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 FHL5Q5TD97 284 aa16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 LYPD8Q6UX82 237 aa16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 CLEC18BQ6UXF7 455 aa16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 TMEM64Q6YI46 380 aa16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 FAM26EQ8N5C1 309 aa16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 FAM98AQ8NCA5 519 aaKnown RBP16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 CLEC18CQ8NCF0 446 aa16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 OR9A2Q8NGT5 310 aa16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 PAIP2Q9BPZ3 127 aaKnown RBP16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 DEPPQ9NTK1 212 aa16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 GIMAP4Q9NUV9 329 aa16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 GIMAP2Q9UG22 337 aa16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 ZNF639Q9UID6 485 aa16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 ENTPD4Q9Y227 616 aa16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 WBP11Q9Y2W2 641 aaKnown RBP16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 CPAMD8Q8IZJ3 1885 aa16.6■□□□□ 0.25
SNRPA1-201ENST00000254193 TMEM120BA0PK00 339 aa16.59■□□□□ 0.25
SNRPA1-201ENST00000254193 NPIPA5E9PKD4 350 aa16.59■□□□□ 0.25
SNRPA1-201ENST00000254193 G3V3Y1 287 aa16.59■□□□□ 0.25
SNRPA1-201ENST00000254193 SEMA7AO75326 666 aa16.59■□□□□ 0.25
SNRPA1-201ENST00000254193 UNC5CO95185 931 aa16.59■□□□□ 0.25
SNRPA1-201ENST00000254193 RFC3P40938 356 aa16.59■□□□□ 0.25
SNRPA1-201ENST00000254193 NR0B1P51843 470 aaKnown RBP16.59■□□□□ 0.25
SNRPA1-201ENST00000254193 ABCE1P61221 599 aaKnown RBP16.59■□□□□ 0.25
SNRPA1-201ENST00000254193 MAGOHP61326 146 aaKnown RBP16.59■□□□□ 0.25
SNRPA1-201ENST00000254193 HLA-DQA1Q5Y7H0 255 aa16.59■□□□□ 0.25
SNRPA1-201ENST00000254193 GFRALQ6UXV0 394 aa16.59■□□□□ 0.25
SNRPA1-201ENST00000254193 RTL4Q6ZR62 310 aa16.59■□□□□ 0.25
SNRPA1-201ENST00000254193 SAMD14Q8IZD0 417 aaPredicted RBP16.59■□□□□ 0.25
SNRPA1-201ENST00000254193 ZNF441Q8N8Z8 693 aa16.59■□□□□ 0.25
SNRPA1-201ENST00000254193 C16orf52Q8NHV5 167 aa16.59■□□□□ 0.25
SNRPA1-201ENST00000254193 KAT2AQ92830 837 aa16.59■□□□□ 0.25
SNRPA1-201ENST00000254193 GFM2Q969S9 779 aaKnown RBP16.59■□□□□ 0.25
SNRPA1-201ENST00000254193 CTHRC1Q96CG8 243 aa16.59■□□□□ 0.25
SNRPA1-201ENST00000254193 FCRL1Q96LA6 429 aa16.59■□□□□ 0.25
SNRPA1-201ENST00000254193 SGCZQ96LD1 299 aa16.59■□□□□ 0.25
SNRPA1-201ENST00000254193 C3orf30Q96M34 536 aa16.59■□□□□ 0.25
SNRPA1-201ENST00000254193 BBS4Q96RK4 519 aa16.59■□□□□ 0.25
SNRPA1-201ENST00000254193 C20orf27Q9GZN8 174 aa16.59■□□□□ 0.25
SNRPA1-201ENST00000254193 MIEF1Q9NQG6 463 aa16.59■□□□□ 0.25
SNRPA1-201ENST00000254193 SEC14L3Q9UDX4 400 aa16.59■□□□□ 0.25
SNRPA1-201ENST00000254193 BCAP29Q9UHQ4 241 aa16.59■□□□□ 0.25
SNRPA1-201ENST00000254193 BAIAP2L1Q9UHR4 511 aa16.59■□□□□ 0.25
SNRPA1-201ENST00000254193 NPIPA1Q9UND3 350 aa16.59■□□□□ 0.25
SNRPA1-201ENST00000254193 OSGIN2Q9Y236 505 aa16.59■□□□□ 0.25
SNRPA1-201ENST00000254193 DTX4Q9Y2E6 619 aa16.59■□□□□ 0.25
SNRPA1-201ENST00000254193 A0A0G2JMM0 328 aa16.58■□□□□ 0.24
SNRPA1-201ENST00000254193 ATP6AP2A0A1C7CYW4 349 aa16.58■□□□□ 0.24
SNRPA1-201ENST00000254193 A0A1W2PPB8 328 aa16.58■□□□□ 0.24
SNRPA1-201ENST00000254193 A0A1W2PRS3 328 aa16.58■□□□□ 0.24
SNRPA1-201ENST00000254193 KIR3DP1A8MWS1 328 aa16.58■□□□□ 0.24
SNRPA1-201ENST00000254193 TMEM114B3SHH9 223 aa16.58■□□□□ 0.24
SNRPA1-201ENST00000254193 KLRC4-KLRK1H3BQV0 150 aa16.58■□□□□ 0.24
SNRPA1-201ENST00000254193 PEX11AO75192 247 aa16.58■□□□□ 0.24
SNRPA1-201ENST00000254193 SKAP2O75563 359 aaPredicted RBP16.58■□□□□ 0.24
SNRPA1-201ENST00000254193 ATP6AP2O75787 350 aa16.58■□□□□ 0.24
SNRPA1-201ENST00000254193 CBX7O95931 251 aa16.58■□□□□ 0.24
SNRPA1-201ENST00000254193 SDC1P18827 310 aa16.58■□□□□ 0.24
SNRPA1-201ENST00000254193 WDR4P57081 412 aaKnown RBP16.58■□□□□ 0.24
SNRPA1-201ENST00000254193 ZNF791Q3KP31 576 aaPredicted RBP16.58■□□□□ 0.24
SNRPA1-201ENST00000254193 ZNF628Q5EBL2 1059 aa16.58■□□□□ 0.24
SNRPA1-201ENST00000254193 XKR7Q5GH72 579 aa16.58■□□□□ 0.24
SNRPA1-201ENST00000254193 HHATQ5VTY9 493 aa16.58■□□□□ 0.24
SNRPA1-201ENST00000254193 IKBIPQ70UQ0 350 aa16.58■□□□□ 0.24
SNRPA1-201ENST00000254193 SIAH3Q8IW03 269 aa16.58■□□□□ 0.24
SNRPA1-201ENST00000254193 HOMEZQ8IX15 550 aa16.58■□□□□ 0.24
SNRPA1-201ENST00000254193 TAGAPQ8N103 731 aa16.58■□□□□ 0.24
SNRPA1-201ENST00000254193 SLC15A4Q8N697 577 aa16.58■□□□□ 0.24
SNRPA1-201ENST00000254193 ZNF781Q8N8C0 355 aa16.58■□□□□ 0.24
SNRPA1-201ENST00000254193 OR52R1Q8NGF1 315 aa16.58■□□□□ 0.24
SNRPA1-201ENST00000254193 CLHC1Q8NHS4 586 aa16.58■□□□□ 0.24
SNRPA1-201ENST00000254193 MGARPQ8TDB4 240 aa16.58■□□□□ 0.24
SNRPA1-201ENST00000254193 ADIPOR1Q96A54 375 aa16.58■□□□□ 0.24
SNRPA1-201ENST00000254193 TLCD1Q96CP7 247 aa16.58■□□□□ 0.24
SNRPA1-201ENST00000254193 SPACA9Q96E40 222 aaPredicted RBP16.58■□□□□ 0.24
SNRPA1-201ENST00000254193 TSSK3Q96PN8 268 aa16.58■□□□□ 0.24
SNRPA1-201ENST00000254193 CCT7Q99832 543 aa16.58■□□□□ 0.24
SNRPA1-201ENST00000254193 ANKRA2Q9H9E1 313 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms