RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 LRIT3Q3SXY7 679 aa4.41□□□□□ -1.7
LINC00397-202ENST00000606785 SLC36A3Q495N2 470 aa4.41□□□□□ -1.7
LINC00397-202ENST00000606785 CEP55Q53EZ4 464 aa4.41□□□□□ -1.7
LINC00397-202ENST00000606785 ATAD3BQ5T9A4 648 aa4.41□□□□□ -1.7
LINC00397-202ENST00000606785 DDI2Q5TDH0 399 aa4.41□□□□□ -1.7
LINC00397-202ENST00000606785 ZDHHC17Q8IUH5 632 aa4.41□□□□□ -1.7
LINC00397-202ENST00000606785 ZNF397Q8NF99 534 aaPredicted RBP4.41□□□□□ -1.7
LINC00397-202ENST00000606785 TRIM58Q8NG06 486 aa4.41□□□□□ -1.7
LINC00397-202ENST00000606785 OR6S1Q8NH40 331 aa4.41□□□□□ -1.7
LINC00397-202ENST00000606785 RPLP0P6Q8NHW5 317 aa4.41□□□□□ -1.7
LINC00397-202ENST00000606785 GIPC3Q8TF64 312 aa4.41□□□□□ -1.7
LINC00397-202ENST00000606785 TCP11Q8WWU5 503 aa4.41□□□□□ -1.7
LINC00397-202ENST00000606785 MRPL24Q96A35 216 aaKnown RBP4.41□□□□□ -1.7
LINC00397-202ENST00000606785 ACCSQ96QU6 501 aa4.41□□□□□ -1.7
LINC00397-202ENST00000606785 SLC39A3Q9BRY0 314 aa4.41□□□□□ -1.7
LINC00397-202ENST00000606785 TCHPQ9BT92 498 aa4.41□□□□□ -1.7
LINC00397-202ENST00000606785 RAB11FIP5Q9BXF6 653 aa4.41□□□□□ -1.7
LINC00397-202ENST00000606785 NLNQ9BYT8 704 aa4.41□□□□□ -1.7
LINC00397-202ENST00000606785 POLR1EQ9GZS1 481 aaKnown RBP4.41□□□□□ -1.7
LINC00397-202ENST00000606785 E9PMD0 336 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 SGK494L7N484 410 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 ZNF195O14628 629 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 PCDH7O60245 1069 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 SPAG6O75602 509 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 OR4F21O95013 312 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 HPRP00739 348 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 FCER2P06734 321 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 ASNSP08243 561 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 HMBSP08397 361 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 PRSS56P0CW18 603 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 CYP11B1P15538 503 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 GPR183P32249 361 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 MATKP42679 507 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 NDST1P52848 882 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 PAX9P55771 341 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 RPS4XP62701 263 aaKnown RBP4.4□□□□□ -1.71
LINC00397-202ENST00000606785 ANKRD55Q3KP44 614 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 USH1GQ495M9 461 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 ACSF3Q4G176 576 aaPredicted RBP4.4□□□□□ -1.71
LINC00397-202ENST00000606785 DCAF12Q5T6F0 453 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 ZNF730Q6ZMV8 503 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 DPY19L2P2Q6ZN68 376 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 PAQR9Q6ZVX9 377 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 PTAR1Q7Z6K3 402 aaPredicted RBP4.4□□□□□ -1.71
LINC00397-202ENST00000606785 VPS36Q86VN1 386 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 HOGA1Q86XE5 327 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 GRAMD2AQ8IUY3 354 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 LINC00518Q8N0U6 118 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 DCLK2Q8N568 766 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 GVQW1Q8N7I0 195 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 OR52M1Q8NGK5 317 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 BRSK1Q8TDC3 778 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 ANKRD49Q8WVL7 239 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 LIPHQ8WWY8 451 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 ZNF486Q96H40 463 aaPredicted RBP4.4□□□□□ -1.71
LINC00397-202ENST00000606785 PRAC1Q96KF2 57 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 KRT12Q99456 494 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 PINK1Q9BXM7 581 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 HOXD1Q9GZZ0 328 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 MTHFD2LQ9H903 347 aaPredicted RBP4.4□□□□□ -1.71
LINC00397-202ENST00000606785 KLHDC2Q9Y2U9 406 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 SLC6A5Q9Y345 797 aa4.4□□□□□ -1.71
LINC00397-202ENST00000606785 AKNAQ7Z591 1439 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 A0A087WW49 117 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 RNF222A6NCQ9 220 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 C15orf61A6NNL5 157 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 A8MU76 341 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 MEI4A8MW99 385 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 BLOC1S5-TXNDC5H3BN57 136 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 BMPR1BO00238 502 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 TSPAN2O60636 221 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 TBX19O60806 448 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 STK17BO94768 372 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 OPN1MWP04001 364 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 RPLP0P05388 317 aaKnown RBP4.39□□□□□ -1.71
LINC00397-202ENST00000606785 CD48P09326 243 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 OPN1MW2P0DN77 364 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 OPN1MW3P0DN78 364 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 DRD5P21918 477 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 EDNRAP25101 427 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 HTR2AP28223 471 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 PPP2R1AP30153 589 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 AXLP30530 894 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 OTX2P32243 289 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 MAP2K2P36507 400 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 PTGFRP43088 359 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 DLX5P56178 289 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 LINC01547P58512 204 aaPredicted RBP4.39□□□□□ -1.71
LINC00397-202ENST00000606785 ABCE1P61221 599 aaKnown RBP4.39□□□□□ -1.71
LINC00397-202ENST00000606785 RPL27P61353 136 aaKnown RBP4.39□□□□□ -1.71
LINC00397-202ENST00000606785 PHEXP78562 749 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 NAAAQ02083 359 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 RIGQ13278 110 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 NFATC2Q13469 925 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 ZNF718Q3SXZ3 478 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 CCDC122Q5T0U0 273 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 NCR3LG1Q68D85 454 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 NIPAL3Q6P499 406 aa4.39□□□□□ -1.71
LINC00397-202ENST00000606785 FIP1L1Q6UN15 594 aaKnown RBP4.39□□□□□ -1.71
LINC00397-202ENST00000606785 CHMP1BQ7LBR1 199 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms