RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 PACS2Q86VP3 889 aa19.51■□□□□ 0.71
PNKP-203ENST00000593946 HORMAD2Q8N7B1 307 aa19.51■□□□□ 0.71
PNKP-203ENST00000593946 ZDHHC19Q8WVZ1 309 aaPredicted RBP19.51■□□□□ 0.71
PNKP-203ENST00000593946 KAT2AQ92830 837 aa19.51■□□□□ 0.71
PNKP-203ENST00000593946 FAM162AQ96A26 154 aa19.51■□□□□ 0.71
PNKP-203ENST00000593946 SLC35G5Q96KT7 338 aa19.51■□□□□ 0.71
PNKP-203ENST00000593946 SERHL2Q9H4I8 314 aa19.51■□□□□ 0.71
PNKP-203ENST00000593946 C3orf14Q9HBI5 128 aa19.51■□□□□ 0.71
PNKP-203ENST00000593946 PARD6AQ9NPB6 346 aa19.51■□□□□ 0.71
PNKP-203ENST00000593946 AP4S1Q9Y587 144 aa19.51■□□□□ 0.71
PNKP-203ENST00000593946 CLDN16Q9Y5I7 305 aa19.51■□□□□ 0.71
PNKP-203ENST00000593946 EP300Q09472 2414 aaPredicted RBP19.5■□□□□ 0.71
PNKP-203ENST00000593946 PCNX2A6NKB5 2137 aa19.5■□□□□ 0.71
PNKP-203ENST00000593946 TGFBR3LH3BV60 316 aa19.5■□□□□ 0.71
PNKP-203ENST00000593946 CLDN4O14493 209 aa19.5■□□□□ 0.71
PNKP-203ENST00000593946 SLC35E2P0CK97 266 aa19.5■□□□□ 0.71
PNKP-203ENST00000593946 PSMA4P25789 261 aaKnown RBP19.5■□□□□ 0.71
PNKP-203ENST00000593946 SOX18P35713 384 aa19.5■□□□□ 0.71
PNKP-203ENST00000593946 EEF1A2Q05639 463 aaKnown RBP19.5■□□□□ 0.71
PNKP-203ENST00000593946 SLC13A2Q13183 592 aa19.5■□□□□ 0.71
PNKP-203ENST00000593946 ZNF628Q5EBL2 1059 aa19.5■□□□□ 0.71
PNKP-203ENST00000593946 SZRD1Q7Z422 152 aa19.5■□□□□ 0.71
PNKP-203ENST00000593946 OR7G2Q8NG99 324 aa19.5■□□□□ 0.71
PNKP-203ENST00000593946 MAGED4Q96JG8 741 aa19.5■□□□□ 0.71
PNKP-203ENST00000593946 OR1F2PQ96R84 312 aa19.5■□□□□ 0.71
PNKP-203ENST00000593946 ASPSCR1Q9BZE9 553 aa19.5■□□□□ 0.71
PNKP-203ENST00000593946 ZNF304Q9HCX3 659 aa19.5■□□□□ 0.71
PNKP-203ENST00000593946 PRTFDC1Q9NRG1 225 aa19.5■□□□□ 0.71
PNKP-203ENST00000593946 DCAF13Q9NV06 445 aaKnown RBP19.5■□□□□ 0.71
PNKP-203ENST00000593946 ARMC1Q9NVT9 282 aa19.5■□□□□ 0.71
PNKP-203ENST00000593946 OCIAD1Q9NX40 245 aa19.5■□□□□ 0.71
PNKP-203ENST00000593946 MYOCOSA0A1B0GUC4 107 aa19.49■□□□□ 0.71
PNKP-203ENST00000593946 AGRPO00253 132 aa19.49■□□□□ 0.71
PNKP-203ENST00000593946 CDC123O75794 336 aaPredicted RBP19.49■□□□□ 0.71
PNKP-203ENST00000593946 SLITRK5O94991 958 aa19.49■□□□□ 0.71
PNKP-203ENST00000593946 TIAF1O95411 115 aa19.49■□□□□ 0.71
PNKP-203ENST00000593946 BAG2O95816 211 aa19.49■□□□□ 0.71
PNKP-203ENST00000593946 IFI6P09912 130 aa19.49■□□□□ 0.71
PNKP-203ENST00000593946 ARAFP10398 606 aa19.49■□□□□ 0.71
PNKP-203ENST00000593946 CSTF2P33240 577 aaKnown RBP eCLIP19.49■□□□□ 0.71
PNKP-203ENST00000593946 PRIM2P49643 509 aa19.49■□□□□ 0.71
PNKP-203ENST00000593946 HSD17B7P56937 341 aa19.49■□□□□ 0.71
PNKP-203ENST00000593946 MRPS35P82673 323 aaKnown RBP19.49■□□□□ 0.71
PNKP-203ENST00000593946 ERV3-1Q14264 604 aa19.49■□□□□ 0.71
PNKP-203ENST00000593946 TNFAIP8L2Q6P589 184 aaPredicted RBP19.49■□□□□ 0.71
PNKP-203ENST00000593946 OR2L13Q8N349 312 aa19.49■□□□□ 0.71
PNKP-203ENST00000593946 AGBL5Q8NDL9 886 aa19.49■□□□□ 0.71
PNKP-203ENST00000593946 MIPOL1Q8TD10 442 aa19.49■□□□□ 0.71
PNKP-203ENST00000593946 ZNF675Q8TD23 568 aa19.49■□□□□ 0.71
PNKP-203ENST00000593946 LANCL2Q9NS86 450 aa19.49■□□□□ 0.71
PNKP-203ENST00000593946 OLAHQ9NV23 265 aa19.49■□□□□ 0.71
PNKP-203ENST00000593946 PTGFRNQ9P2B2 879 aa19.49■□□□□ 0.71
PNKP-203ENST00000593946 NCDNQ9UBB6 729 aa19.49■□□□□ 0.71
PNKP-203ENST00000593946 STOML1Q9UBI4 398 aa19.49■□□□□ 0.71
PNKP-203ENST00000593946 C4orf47A7E2U8 309 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 UPK1AO00322 258 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 HMGN4O00479 90 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 HMGN2P05204 90 aaKnown RBP19.48■□□□□ 0.71
PNKP-203ENST00000593946 FBLP22087 321 aaKnown RBP19.48■□□□□ 0.71
PNKP-203ENST00000593946 TGM1P22735 817 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 SESN3P58005 492 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 ZNF630Q2M218 657 aaPredicted RBP19.48■□□□□ 0.71
PNKP-203ENST00000593946 PWWP2BQ6NUJ5 590 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 BPHLQ86WA6 291 aaPredicted RBP19.48■□□□□ 0.71
PNKP-203ENST00000593946 PQLC1Q8N2U9 271 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 BMPERQ8N8U9 685 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 NUP43Q8NFH3 380 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 ANKRA2Q9H9E1 313 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 ANAPC2Q9UJX6 822 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 CCDC88CQ9P219 2028 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 A0A087WV62 115 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 JRKO75564 520 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 KDELR2P33947 212 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 NBL1P41271 181 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 PRKAG1P54619 331 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 BTG2P78543 158 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 SCARB2Q14108 478 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 PRICKLE4Q2TBC4 344 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 FHL5Q5TD97 284 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 C1orf189Q5VU69 101 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 FAM111BQ6SJ93 734 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 PPP1R3BQ86XI6 285 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 TMEM126BQ8IUX1 230 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 FAM110BQ8TC76 370 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 CTHRC1Q96CG8 243 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 GIMAP5Q96F15 307 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 CDC6Q99741 560 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 EFHD1Q9BUP0 239 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 A4GALTQ9NPC4 353 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 DDX18Q9NVP1 670 aaKnown RBP19.48■□□□□ 0.71
PNKP-203ENST00000593946 THUMPD1Q9NXG2 353 aaKnown RBP19.48■□□□□ 0.71
PNKP-203ENST00000593946 MAT2BQ9NZL9 334 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 C6orf203Q9P0P8 240 aaPredicted RBP19.48■□□□□ 0.71
PNKP-203ENST00000593946 TRPC4Q9UBN4 977 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 AURKCQ9UQB9 309 aa19.48■□□□□ 0.71
PNKP-203ENST00000593946 EFCAB7A8K855 629 aa19.47■□□□□ 0.71
PNKP-203ENST00000593946 PLOD3O60568 738 aa19.47■□□□□ 0.71
PNKP-203ENST00000593946 SCRG1O75711 98 aa19.47■□□□□ 0.71
PNKP-203ENST00000593946 SERPINA1P01009 418 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms