RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 CHST14Q8NCH0 376 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 PROKR2Q8NFJ6 384 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 OR8J2Q8NGG1 315 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 OR52P1PQ8NH57 321 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 TFGQ92734 400 aaPredicted RBP10.02□□□□□ -0.81
USB1-212ENST00000566082 RGMAQ96B86 450 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 GTPBP2Q9BX10 602 aaKnown RBP10.02□□□□□ -0.81
USB1-212ENST00000566082 FOLH1BQ9HBA9 442 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 MARK1Q9P0L2 795 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 PCDHGB1Q9Y5G3 927 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 IQCMA0A1B0GVH7 501 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 M0R082 166 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 TNFRSF10AO00220 468 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 RNASET2O00584 256 aaKnown RBP10.02□□□□□ -0.81
USB1-212ENST00000566082 PROM1O43490 865 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 ZNF821O75541 412 aaPredicted RBP10.02□□□□□ -0.81
USB1-212ENST00000566082 PEPDP12955 493 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 GPR4P46093 362 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 METTL2BQ6P1Q9 378 aaKnown RBP10.02□□□□□ -0.81
USB1-212ENST00000566082 AMZ2Q86W34 360 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 FAM109AQ8N4B1 249 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 ZNF557Q8N988 423 aaPredicted RBP10.02□□□□□ -0.81
USB1-212ENST00000566082 OR6K6Q8NGW6 343 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 SORCS1Q8WY21 1168 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 OR5P2Q8WZ92 322 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 SMPDL3AQ92484 453 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 FATE1Q969F0 183 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 GLYATL1Q969I3 302 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 ZIC5Q96T25 663 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 MUTYHQ9UIF7 546 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 IKZF2Q9UKS7 526 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 GREB1LQ9C091 1923 aaPredicted RBP10.02□□□□□ -0.81
USB1-212ENST00000566082 LEFTY1O75610 366 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 OR7A10O76100 309 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 PCCBP05166 539 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 BMP1P13497 986 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 LCN1P31025 176 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 RPS5P46782 204 aaKnown RBP10.02□□□□□ -0.81
USB1-212ENST00000566082 CCR8P51685 355 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 FKBP1BP68106 108 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 POU4F3Q15319 338 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 LDLRAD1Q5T700 205 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 FAM205BPQ63HN1 556 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 SLC25A25Q6KCM7 469 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 MTFR2Q6P444 385 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 ZNF783Q6ZMS7 281 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 CEACAM19Q7Z692 300 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 PLCZ1Q86YW0 608 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 SLITRK4Q8IW52 837 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 LINC00471Q8N535 108 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 BEST4Q8NFU0 473 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 ECHDC3Q96DC8 303 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 PPP1R16AQ96I34 528 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 CCDC3Q9BQI4 270 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 NDC1Q9BTX1 674 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 TXNL4BQ9NX01 149 aaKnown RBP10.02□□□□□ -0.81
USB1-212ENST00000566082 COMMD9Q9P000 198 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 ZNF69Q9UC07 566 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 SLC45A1Q9Y2W3 748 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 SNX11Q9Y5W9 270 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 IRAK3Q9Y616 596 aa10.02□□□□□ -0.81
USB1-212ENST00000566082 H3BSH0 61 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 H7C0S8 307 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 ADAM12O43184 909 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 HLA-DQA2P01906 255 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 SCG5P05408 212 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 IGFBP1P08833 259 aaPredicted RBP10.01□□□□□ -0.81
USB1-212ENST00000566082 IDSP22304 550 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 CCND3P30281 292 aaPredicted RBP10.01□□□□□ -0.81
USB1-212ENST00000566082 CTSOP43234 321 aaPredicted RBP10.01□□□□□ -0.81
USB1-212ENST00000566082 FBXW4P57775 412 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 PITPNAQ00169 270 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 FAPQ12884 760 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 TRAM2Q15035 370 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 PAQR6Q6TCH4 344 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 FAM129CQ86XR2 697 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 ANKK1Q8NFD2 765 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 OR5D16Q8NGK9 328 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 FAM46AQ96IP4 442 aaKnown RBP10.01□□□□□ -0.81
USB1-212ENST00000566082 OR4K3Q96R72 315 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 MCHR1Q99705 422 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 SLC6A16Q9GZN6 736 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 PADI2Q9Y2J8 665 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 MED16Q9Y2X0 877 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 MAB21L2Q9Y586 359 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 FXYD6-FXYD2A0A087WZ82 144 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 FAM25EA8MYX2 175 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 CSO75390 466 aaKnown RBP10.01□□□□□ -0.81
USB1-212ENST00000566082 ALX3O95076 343 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 ZNF30P17039 623 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 DDOSTP39656 456 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 GCGRP47871 477 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 RHAGQ02094 409 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 MLLT11Q13015 90 aaPredicted RBP10.01□□□□□ -0.81
USB1-212ENST00000566082 SNTB2Q13425 540 aaKnown RBP10.01□□□□□ -0.81
USB1-212ENST00000566082 BAK1Q16611 211 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 LIN54Q6MZP7 749 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 NUDT18Q6ZVK8 323 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 FAM220AQ7Z4H9 259 aa10.01□□□□□ -0.81
USB1-212ENST00000566082 OR2T35Q8NGX2 323 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms