RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 SPARCP09486 303 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 MAT1AQ00266 395 aaKnown RBP16.49■□□□□ 0.23
PTPN21-208ENST00000556564 QPRTQ15274 297 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 TSSK4Q6SA08 328 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 LKAAEAR1Q8TD35 194 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 GAL3ST3Q96A11 431 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 CTRCQ99895 268 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 NAA11Q9BSU3 229 aaPredicted RBP16.49■□□□□ 0.23
PTPN21-208ENST00000556564 ACTRT3Q9BYD9 372 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 SARDHQ9UL12 918 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 LOC100130705A0A1B0GUX0 176 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 ADORA3P0DMS8 318 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 CD27P26842 260 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 MMP12P39900 470 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 ACOT4Q8N9L9 421 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 CEP76Q8TAP6 659 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 ECHDC3Q96DC8 303 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 C11orf24Q96F05 449 aaPredicted RBP16.49■□□□□ 0.23
PTPN21-208ENST00000556564 TM9SF2Q99805 663 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 POT1Q9NUX5 634 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 COMMD9Q9P000 198 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 MMP17Q9ULZ9 603 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 WNK3Q9BYP7 1800 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 COL4A1P02462 1669 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 TRBV11-1A0A0K0K1C0 115 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 UNC119BA6NIH7 251 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 FPR1P21462 350 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 RACK1P63244 317 aaKnown RBP16.49■□□□□ 0.23
PTPN21-208ENST00000556564 FOXK1P85037 733 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 LIN54Q6MZP7 749 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 HORMAD2Q8N7B1 307 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 OR9A4Q8NGU2 314 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 MAL2Q969L2 176 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 TMED9Q9BVK6 235 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 ING3Q9NXR8 418 aa16.49■□□□□ 0.23
PTPN21-208ENST00000556564 PDCD5O14737 125 aa16.48■□□□□ 0.23
PTPN21-208ENST00000556564 ADPRHP54922 357 aa16.48■□□□□ 0.23
PTPN21-208ENST00000556564 CRYZQ08257 329 aaKnown RBP16.48■□□□□ 0.23
PTPN21-208ENST00000556564 ADNP2Q6IQ32 1131 aa16.48■□□□□ 0.23
PTPN21-208ENST00000556564 ANKFN1Q8N957 763 aa16.48■□□□□ 0.23
PTPN21-208ENST00000556564 CLEC4MQ9H2X3 399 aaPredicted RBP16.48■□□□□ 0.23
PTPN21-208ENST00000556564 MBNL1Q9NR56 388 aaKnown RBP16.48■□□□□ 0.23
PTPN21-208ENST00000556564 PJA1Q8NG27 643 aa16.48■□□□□ 0.23
PTPN21-208ENST00000556564 PMM1Q92871 262 aa16.48■□□□□ 0.23
PTPN21-208ENST00000556564 DIRAS2Q96HU8 199 aa16.48■□□□□ 0.23
PTPN21-208ENST00000556564 ERMAPQ96PL5 475 aaPredicted RBP16.48■□□□□ 0.23
PTPN21-208ENST00000556564 CUTCQ9NTM9 273 aa16.48■□□□□ 0.23
PTPN21-208ENST00000556564 SH3BGRL2Q9UJC5 107 aa16.48■□□□□ 0.23
PTPN21-208ENST00000556564 POU2F3Q9UKI9 436 aa16.48■□□□□ 0.23
PTPN21-208ENST00000556564 ERVK-19Q9WJR5 959 aa16.48■□□□□ 0.23
PTPN21-208ENST00000556564 ZNF84P51523 738 aa16.48■□□□□ 0.23
PTPN21-208ENST00000556564 ADAMTSL4Q6UY14 1074 aa16.48■□□□□ 0.23
PTPN21-208ENST00000556564 ZNF627Q7L945 461 aa16.48■□□□□ 0.23
PTPN21-208ENST00000556564 P2RY8Q86VZ1 359 aa16.48■□□□□ 0.23
PTPN21-208ENST00000556564 OR51A7Q8NH64 312 aa16.48■□□□□ 0.23
PTPN21-208ENST00000556564 MAPKAP1Q9BPZ7 522 aa16.48■□□□□ 0.23
PTPN21-208ENST00000556564 DOHHQ9BU89 302 aa16.48■□□□□ 0.23
PTPN21-208ENST00000556564 DNAJC27Q9NZQ0 273 aa16.48■□□□□ 0.23
PTPN21-208ENST00000556564 HK3P52790 923 aa16.48■□□□□ 0.23
PTPN21-208ENST00000556564 OR1D5P58170 312 aa16.48■□□□□ 0.23
PTPN21-208ENST00000556564 VMACQ2NL98 169 aa16.48■□□□□ 0.23
PTPN21-208ENST00000556564 KCTD21Q4G0X4 260 aa16.48■□□□□ 0.23
PTPN21-208ENST00000556564 ARL9Q6T311 187 aa16.48■□□□□ 0.23
PTPN21-208ENST00000556564 TEX26Q8N6G2 289 aa16.48■□□□□ 0.23
PTPN21-208ENST00000556564 C19orf47Q8N9M1 422 aaKnown RBP16.48■□□□□ 0.23
PTPN21-208ENST00000556564 OR6N2Q8NGY6 317 aa16.48■□□□□ 0.23
PTPN21-208ENST00000556564 FAM129BQ96TA1 746 aa16.48■□□□□ 0.23
PTPN21-208ENST00000556564 FARS2O95363 451 aaKnown RBP16.47■□□□□ 0.23
PTPN21-208ENST00000556564 PLP2Q04941 152 aa16.47■□□□□ 0.23
PTPN21-208ENST00000556564 EXOC3L2Q2M3D2 409 aa16.47■□□□□ 0.23
PTPN21-208ENST00000556564 UGT3A2Q3SY77 523 aa16.47■□□□□ 0.23
PTPN21-208ENST00000556564 TMEM52BQ4KMG9 183 aa16.47■□□□□ 0.23
PTPN21-208ENST00000556564 GSTO2Q9H4Y5 243 aa16.47■□□□□ 0.23
PTPN21-208ENST00000556564 PCDHGB1Q9Y5G3 927 aa16.47■□□□□ 0.23
PTPN21-208ENST00000556564 H0Y8X5 98 aa16.47■□□□□ 0.23
PTPN21-208ENST00000556564 UGDHO60701 494 aa16.47■□□□□ 0.23
PTPN21-208ENST00000556564 PRDX3P30048 256 aaKnown RBP16.47■□□□□ 0.23
PTPN21-208ENST00000556564 FAUP35544 74 aaKnown RBP16.47■□□□□ 0.23
PTPN21-208ENST00000556564 GPR143P51810 404 aa16.47■□□□□ 0.23
PTPN21-208ENST00000556564 CDH11P55287 796 aa16.47■□□□□ 0.23
PTPN21-208ENST00000556564 ARHGAP19Q14CB8 494 aa16.47■□□□□ 0.23
PTPN21-208ENST00000556564 CARTPTQ16568 116 aa16.47■□□□□ 0.23
PTPN21-208ENST00000556564 ARL14Q8N4G2 192 aa16.47■□□□□ 0.23
PTPN21-208ENST00000556564 CLCC1Q96S66 551 aa16.47■□□□□ 0.23
PTPN21-208ENST00000556564 TMEM185BQ9H7F4 350 aa16.47■□□□□ 0.23
PTPN21-208ENST00000556564 FKBP7Q9Y680 259 aa16.47■□□□□ 0.23
PTPN21-208ENST00000556564 PEPDP12955 493 aa16.47■□□□□ 0.23
PTPN21-208ENST00000556564 ENDOUP21128 410 aaKnown RBP16.47■□□□□ 0.23
PTPN21-208ENST00000556564 SLC5A8Q8N695 610 aa16.47■□□□□ 0.23
PTPN21-208ENST00000556564 TMEM203Q969S6 136 aa16.47■□□□□ 0.23
PTPN21-208ENST00000556564 C1QTNF1Q9BXJ1 281 aa16.47■□□□□ 0.23
PTPN21-208ENST00000556564 IGLV3-10A0A075B6K4 115 aa16.47■□□□□ 0.23
PTPN21-208ENST00000556564 SNPHO15079 494 aa16.47■□□□□ 0.23
PTPN21-208ENST00000556564 EIF2DP41214 584 aaKnown RBP16.47■□□□□ 0.23
PTPN21-208ENST00000556564 KCNC4Q03721 635 aa16.47■□□□□ 0.23
PTPN21-208ENST00000556564 MANEAQ5SRI9 462 aa16.47■□□□□ 0.23
PTPN21-208ENST00000556564 AGBL5Q8NDL9 886 aa16.47■□□□□ 0.23
PTPN21-208ENST00000556564 TCTN2Q96GX1 697 aa16.47■□□□□ 0.23
PTPN21-208ENST00000556564 C1orf21Q9H246 121 aa16.47■□□□□ 0.23
PTPN21-208ENST00000556564 SOCS2O14508 198 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms