RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 C17orf62Q9BQA9 187 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 OR2S2Q9NQN1 319 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 SDHAF2Q9NX18 166 aa9.54□□□□□ -0.88
COL4A6-208ENST00000538570 NID2Q14112 1375 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 SLIT3O75094 1523 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 NPIPA2E9PIF3 369 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 NPIPA3F8WFD2 350 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 CFHP08603 1231 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 OR12D1P0DN82 309 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 NCS1P62166 190 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 KCNAB2Q13303 367 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 EXOC3L2Q2M3D2 409 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 C10orf62Q5T681 223 aaPredicted RBP9.53□□□□□ -0.88
COL4A6-208ENST00000538570 HS3ST5Q8IZT8 346 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.53□□□□□ -0.88
COL4A6-208ENST00000538570 COG8Q96MW5 612 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 MROQ9BYG7 248 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 BCO2Q9BYV7 579 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 QRSL1Q9H0R6 528 aaKnown RBP9.53□□□□□ -0.88
COL4A6-208ENST00000538570 FOLH1BQ9HBA9 442 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 H7C1Q1 480 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 PEX10O60683 326 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 CERS1P27544 350 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 AGTR1P30556 359 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 HK3P52790 923 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 ID2Q02363 134 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 OLIG2Q13516 323 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 FGFBP1Q14512 234 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 DHCR24Q15392 516 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 MS4A13Q5J8X5 152 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.53□□□□□ -0.88
COL4A6-208ENST00000538570 TIPARPQ7Z3E1 657 aaKnown RBP9.53□□□□□ -0.88
COL4A6-208ENST00000538570 TSPAN33Q86UF1 283 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 NOXA1Q86UR1 476 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 OR13C3Q8NGS6 347 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 SLC35F5Q8WV83 523 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 KCNJ9Q92806 393 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 CCDC32Q9BV29 185 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 RPS10P5Q9NQ39 176 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 SARDHQ9UL12 918 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 TRAV20A0A0B4J274 112 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.53□□□□□ -0.88
COL4A6-208ENST00000538570 GLOD5A6NK44 160 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 GRID2O43424 1007 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 DENRO43583 198 aaKnown RBP9.53□□□□□ -0.88
COL4A6-208ENST00000538570 SCGB1D1O95968 90 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 C7P10643 843 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 AGTR2P50052 363 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 SLC41A3Q96GZ6 507 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 CNTNAP3BQ96NU0 1288 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 GIMAP2Q9UG22 337 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 BHLHE40O14503 412 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 PRKYO43930 277 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 PRAMEF11O60813 436 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 INHAP05111 366 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 HTR1EP28566 365 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 ACTA2P62736 377 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 ACTG2P63267 376 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 NFATC3Q12968 1075 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 GPM6BQ13491 265 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 C6orf141Q5SZD1 244 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 SPRYD7Q5W111 196 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 TXNDC8Q6A555 127 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 ELP2Q6IA86 826 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 TREML1Q86YW5 311 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 BEST3Q8N1M1 668 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 OR5H6Q8NGV6 325 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 OR8D2Q9GZM6 311 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 A0A0G2JLL6 359 aaPredicted RBP9.53□□□□□ -0.88
COL4A6-208ENST00000538570 FHP07954 510 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 DLDP09622 509 aaKnown RBP9.53□□□□□ -0.88
COL4A6-208ENST00000538570 HNF1AP20823 631 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 CD6P30203 668 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 SHMT2P34897 504 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 PNCKQ6P2M8 343 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 PRRT2Q7Z6L0 340 aaPredicted RBP9.53□□□□□ -0.88
COL4A6-208ENST00000538570 TMPRSS12Q86WS5 348 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 Q8N9G6 341 aaPredicted RBP9.53□□□□□ -0.88
COL4A6-208ENST00000538570 DCAF4L2Q8NA75 395 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 POC1BQ8TC44 478 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 PROKR1Q8TCW9 393 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 LGALS12Q96DT0 336 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 SLC25A44Q96H78 314 aaPredicted RBP9.53□□□□□ -0.88
COL4A6-208ENST00000538570 PBDC1Q9BVG4 233 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 FUNDC2Q9BWH2 189 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 PRTFDC1Q9NRG1 225 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 GNG13Q9P2W3 67 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 STUB1Q9UNE7 303 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 C3P01024 1663 aa9.53□□□□□ -0.88
COL4A6-208ENST00000538570 PAK4O96013 591 aaPredicted RBP9.52□□□□□ -0.88
COL4A6-208ENST00000538570 ERCC1P07992 297 aaPredicted RBP9.52□□□□□ -0.88
COL4A6-208ENST00000538570 ACRP10323 421 aa9.52□□□□□ -0.88
COL4A6-208ENST00000538570 IFNGR1P15260 489 aa9.52□□□□□ -0.88
COL4A6-208ENST00000538570 CAPN3P20807 821 aa9.52□□□□□ -0.88
COL4A6-208ENST00000538570 OXTRP30559 389 aa9.52□□□□□ -0.88
COL4A6-208ENST00000538570 PREPP48147 710 aa9.52□□□□□ -0.88
COL4A6-208ENST00000538570 PER3P56645 1201 aa9.52□□□□□ -0.88
COL4A6-208ENST00000538570 RAB30Q15771 203 aa9.52□□□□□ -0.88
COL4A6-208ENST00000538570 PPP1R3AQ16821 1122 aa9.52□□□□□ -0.88
COL4A6-208ENST00000538570 C22orf42Q6IC83 251 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms