RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 ZNF354BQ96LW1 612 aa11.92□□□□□ -0.5
VEGFA-224ENST00000523873 LMF1Q96S06 567 aa11.92□□□□□ -0.5
VEGFA-224ENST00000523873 REEP4Q9H6H4 257 aa11.92□□□□□ -0.5
VEGFA-224ENST00000523873 ANKRA2Q9H9E1 313 aa11.92□□□□□ -0.5
VEGFA-224ENST00000523873 CXorf21Q9HAI6 301 aa11.92□□□□□ -0.5
VEGFA-224ENST00000523873 SLAMF7Q9NQ25 335 aa11.92□□□□□ -0.5
VEGFA-224ENST00000523873 STMN3Q9NZ72 180 aa11.92□□□□□ -0.5
VEGFA-224ENST00000523873 MAT2BQ9NZL9 334 aa11.92□□□□□ -0.5
VEGFA-224ENST00000523873 PSME2Q9UL46 239 aa11.92□□□□□ -0.5
VEGFA-224ENST00000523873 PCDHGB7Q9Y5F8 929 aa11.92□□□□□ -0.5
VEGFA-224ENST00000523873 ZNF780BQ9Y6R6 833 aa11.92□□□□□ -0.5
VEGFA-224ENST00000523873 NBEAQ8NFP9 2946 aa11.92□□□□□ -0.5
VEGFA-224ENST00000523873 SHANK1Q9Y566 2161 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 TMEM200CA6NKL6 621 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 GABRR3A8MPY1 467 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 WWP2O00308 870 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 ZNF195O14628 629 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 HDAC3O15379 428 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 KLHL41O60662 606 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 ZNF354AO60765 605 aaPredicted RBP11.91□□□□□ -0.5
VEGFA-224ENST00000523873 NME6O75414 186 aaPredicted RBP11.91□□□□□ -0.5
VEGFA-224ENST00000523873 PCSK2P16519 638 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 LBPP18428 481 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 MAPK1P28482 360 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 GALNSP34059 522 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 DIO3P55073 304 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 RNF4P78317 190 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 EMX2Q04743 252 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 KLRB1Q12918 225 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 MPEG1Q2M385 716 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 PLEKHN1Q494U1 663 aaPredicted RBP11.91□□□□□ -0.5
VEGFA-224ENST00000523873 TRMT12Q53H54 448 aaKnown RBP11.91□□□□□ -0.5
VEGFA-224ENST00000523873 HSP90B2PQ58FF3 399 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 SLC6A19Q695T7 634 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 IGFL3Q6UXB1 125 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 HSDL2Q6YN16 418 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 LARP4Q71RC2 724 aaKnown RBP eCLIP11.91□□□□□ -0.51e-25■□□□□ 10.3
VEGFA-224ENST00000523873 KIRREL3Q8IZU9 778 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 TEX19Q8NA77 164 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 OR7A2PQ8NGA2 310 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 SUN3Q8TAQ9 357 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 PIWIL2Q8TC59 973 aaKnown RBP11.91□□□□□ -0.5
VEGFA-224ENST00000523873 PPCDCQ96CD2 204 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 THOC1Q96FV9 657 aaKnown RBP11.91□□□□□ -0.5
VEGFA-224ENST00000523873 FBXL20Q96IG2 436 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 MARK4Q96L34 752 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 MAGEB18Q96M61 343 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 C7orf26Q96N11 449 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 BBS4Q96RK4 519 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 GAL3ST4Q96RP7 486 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 GIMAP4Q9NUV9 329 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 EHD3Q9NZN3 535 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 SH3BP4Q9P0V3 963 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 COPS7AQ9UBW8 275 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 EIF3LQ9Y262 564 aaKnown RBP11.91□□□□□ -0.5
VEGFA-224ENST00000523873 USH1CQ9Y6N9 552 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 IGSF10Q6WRI0 2623 aa11.91□□□□□ -0.5
VEGFA-224ENST00000523873 MYO1GB0I1T2 1018 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 ATP8B1O43520 1251 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 DYRK3O43781 588 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 ITGA10O75578 1167 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 CBX7O95931 251 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 ATP1B1P05026 303 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 ALDOCP09972 364 aaKnown RBP11.9□□□□□ -0.5
VEGFA-224ENST00000523873 PRPS2P11908 318 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 S1PR1P21453 382 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 ASMTP46597 345 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 NCBP2P52298 156 aaKnown RBP eCLIP11.9□□□□□ -0.5
VEGFA-224ENST00000523873 NME5P56597 212 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 SLC37A1P57057 533 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 FUT7Q11130 342 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 TUBA3CQ13748 450 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 CEBPEQ15744 281 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 PRR30Q53SZ7 412 aaPredicted RBP11.9□□□□□ -0.5
VEGFA-224ENST00000523873 ZNF628Q5EBL2 1059 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 C6orf163Q5TEZ5 329 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 NXNQ6DKJ4 435 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 TUBA3EQ6PEY2 450 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 RNF111Q6ZNA4 994 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 FAM9CQ8IZT9 166 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 VWA5B2Q8N398 1253 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 Q8NA96 180 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 C7orf57Q8NEG2 295 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 OR52R1Q8NGF1 315 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 TM9SF4Q92544 642 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 ART5Q96L15 291 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 OR52B2Q96RD2 323 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 HES7Q9BYE0 225 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.9□□□□□ -0.53e-8■■□□□ 11.5
VEGFA-224ENST00000523873 OR10A5Q9H207 317 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 GLIPR2Q9H4G4 154 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 MED4Q9NPJ6 270 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 NOP53Q9NZM5 478 aaKnown RBP11.9□□□□□ -0.5
VEGFA-224ENST00000523873 BCAP29Q9UHQ4 241 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 TEKT2Q9UIF3 430 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 DTX4Q9Y2E6 619 aa11.9□□□□□ -0.5
VEGFA-224ENST00000523873 WBP11Q9Y2W2 641 aaKnown RBP11.9□□□□□ -0.5
VEGFA-224ENST00000523873 NCKAP5O14513 1909 aa11.9□□□□□ -0.51
VEGFA-224ENST00000523873 FREM3P0C091 2139 aa11.89□□□□□ -0.51
VEGFA-224ENST00000523873 DYTNA2CJ06 578 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms