RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 ZNF681Q96N22 645 aa16.64■□□□□ 0.25
SNRPA1-201ENST00000254193 GAL3ST4Q96RP7 486 aa16.64■□□□□ 0.25
SNRPA1-201ENST00000254193 LRTM1Q9HBL6 345 aa16.64■□□□□ 0.25
SNRPA1-201ENST00000254193 ERVK-11Q9UQG0 969 aa16.64■□□□□ 0.25
SNRPA1-201ENST00000254193 ZNF780BQ9Y6R6 833 aa16.64■□□□□ 0.25
SNRPA1-201ENST00000254193 MYO18BQ8IUG5 2567 aa16.64■□□□□ 0.25
SNRPA1-201ENST00000254193 A8MVJ9 347 aa16.63■□□□□ 0.25
SNRPA1-201ENST00000254193 TM9SF1O15321 606 aa16.63■□□□□ 0.25
SNRPA1-201ENST00000254193 RGS14O43566 566 aa16.63■□□□□ 0.25
SNRPA1-201ENST00000254193 CRYABP02511 175 aaKnown RBP16.63■□□□□ 0.25
SNRPA1-201ENST00000254193 EDN3P14138 238 aa16.63■□□□□ 0.25
SNRPA1-201ENST00000254193 SERPINB5P36952 375 aa16.63■□□□□ 0.25
SNRPA1-201ENST00000254193 SRSF1Q07955 248 aaKnown RBP eCLIP16.63■□□□□ 0.25
SNRPA1-201ENST00000254193 ZNF763Q0D2J5 394 aa16.63■□□□□ 0.25
SNRPA1-201ENST00000254193 C2orf80Q0P641 193 aa16.63■□□□□ 0.25
SNRPA1-201ENST00000254193 MGAT2Q10469 447 aa16.63■□□□□ 0.25
SNRPA1-201ENST00000254193 FUT7Q11130 342 aa16.63■□□□□ 0.25
SNRPA1-201ENST00000254193 HEPACAMQ14CZ8 416 aa16.63■□□□□ 0.25
SNRPA1-201ENST00000254193 KIAA0040Q15053 153 aa16.63■□□□□ 0.25
SNRPA1-201ENST00000254193 CHI3L2Q15782 390 aa16.63■□□□□ 0.25
SNRPA1-201ENST00000254193 MPEG1Q2M385 716 aa16.63■□□□□ 0.25
SNRPA1-201ENST00000254193 PIGGQ5H8A4 983 aa16.63■□□□□ 0.25
SNRPA1-201ENST00000254193 FAM111BQ6SJ93 734 aa16.63■□□□□ 0.25
SNRPA1-201ENST00000254193 SLC29A4Q7RTT9 530 aa16.63■□□□□ 0.25
SNRPA1-201ENST00000254193 DDIASQ8IXT1 998 aa16.63■□□□□ 0.25
SNRPA1-201ENST00000254193 ST6GALNAC3Q8NDV1 305 aa16.63■□□□□ 0.25
SNRPA1-201ENST00000254193 ADCY4Q8NFM4 1077 aa16.63■□□□□ 0.25
SNRPA1-201ENST00000254193 DNAJB8Q8NHS0 232 aa16.63■□□□□ 0.25
SNRPA1-201ENST00000254193 PRR7Q8TB68 274 aa16.63■□□□□ 0.25
SNRPA1-201ENST00000254193 NR4A3Q92570 626 aa16.63■□□□□ 0.25
SNRPA1-201ENST00000254193 ZNF395Q9H8N7 513 aaPredicted RBP16.63■□□□□ 0.25
SNRPA1-201ENST00000254193 PFDN4Q9NQP4 134 aa16.63■□□□□ 0.25
SNRPA1-201ENST00000254193 HPF1Q9NWY4 346 aa16.63■□□□□ 0.25
SNRPA1-201ENST00000254193 C1orf109Q9NX04 203 aa16.63■□□□□ 0.25
SNRPA1-201ENST00000254193 ZDHHC2Q9UIJ5 367 aa16.63■□□□□ 0.25
SNRPA1-201ENST00000254193 SPENQ96T58 3664 aaKnown RBP16.63■□□□□ 0.25
SNRPA1-201ENST00000254193 PIP5K1BO14986 540 aa16.62■□□□□ 0.25
SNRPA1-201ENST00000254193 BIRC5O15392 142 aa16.62■□□□□ 0.25
SNRPA1-201ENST00000254193 ITM2AO43736 263 aa16.62■□□□□ 0.25
SNRPA1-201ENST00000254193 LYPLA1O75608 230 aaPredicted RBP16.62■□□□□ 0.25
SNRPA1-201ENST00000254193 ZWINTO95229 277 aa16.62■□□□□ 0.25
SNRPA1-201ENST00000254193 ATP1B1P05026 303 aa16.62■□□□□ 0.25
SNRPA1-201ENST00000254193 DHRS4L1P0CG22 281 aa16.62■□□□□ 0.25
SNRPA1-201ENST00000254193 S1PR1P21453 382 aa16.62■□□□□ 0.25
SNRPA1-201ENST00000254193 PRPH2P23942 346 aa16.62■□□□□ 0.25
SNRPA1-201ENST00000254193 TACR1P25103 407 aa16.62■□□□□ 0.25
SNRPA1-201ENST00000254193 TDGF1P3P51864 188 aa16.62■□□□□ 0.25
SNRPA1-201ENST00000254193 ELOAQ14241 798 aaKnown RBP16.62■□□□□ 0.25
SNRPA1-201ENST00000254193 EBPQ15125 230 aaKnown RBP16.62■□□□□ 0.25
SNRPA1-201ENST00000254193 LTB4RQ15722 352 aa16.62■□□□□ 0.25
SNRPA1-201ENST00000254193 PRSS53Q2L4Q9 553 aa16.62■□□□□ 0.25
SNRPA1-201ENST00000254193 PRICKLE4Q2TBC4 344 aa16.62■□□□□ 0.25
SNRPA1-201ENST00000254193 C6orf163Q5TEZ5 329 aa16.62■□□□□ 0.25
SNRPA1-201ENST00000254193 FAM71E1Q6IPT2 247 aa16.62■□□□□ 0.25
SNRPA1-201ENST00000254193 RNF165Q6ZSG1 346 aa16.62■□□□□ 0.25
SNRPA1-201ENST00000254193 GPALPP1Q8IXQ4 340 aa16.62■□□□□ 0.25
SNRPA1-201ENST00000254193 CCDC116Q8IYX3 515 aa16.62■□□□□ 0.25
SNRPA1-201ENST00000254193 LRRC25Q8N386 305 aaPredicted RBP16.62■□□□□ 0.25
SNRPA1-201ENST00000254193 ZNF615Q8N8J6 731 aa16.62■□□□□ 0.25
SNRPA1-201ENST00000254193 ANKRD42Q8N9B4 389 aa16.62■□□□□ 0.25
SNRPA1-201ENST00000254193 FAM76AQ8TAV0 307 aa16.62■□□□□ 0.25
SNRPA1-201ENST00000254193 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.62■□□□□ 0.257e-11■■■■□ 26.3
SNRPA1-201ENST00000254193 FRMD6Q96NE9 622 aa16.62■□□□□ 0.25
SNRPA1-201ENST00000254193 BRINP2Q9C0B6 783 aa16.62■□□□□ 0.25
SNRPA1-201ENST00000254193 WWTR1Q9GZV5 400 aa16.62■□□□□ 0.25
SNRPA1-201ENST00000254193 STMN4Q9H169 189 aaPredicted RBP16.62■□□□□ 0.25
SNRPA1-201ENST00000254193 TIMMDC1Q9NPL8 285 aa16.62■□□□□ 0.25
SNRPA1-201ENST00000254193 MAT2BQ9NZL9 334 aa16.62■□□□□ 0.25
SNRPA1-201ENST00000254193 TENM4Q6N022 2769 aa16.62■□□□□ 0.25
SNRPA1-201ENST00000254193 ASPDHA6ND91 283 aa16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 OR6C76A6NM76 312 aa16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 NPIPB8E9PQR5 432 aa16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 PEX1O43933 1283 aa16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 NADKO95544 446 aaPredicted RBP16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 HSPA4LO95757 839 aa16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 SERPINE1P05121 402 aa16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 NEFHP12036 1026 aa16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 DDCP20711 480 aa16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 SOX18P35713 384 aa16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 GSTM5P46439 218 aa16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 GPR85P60893 370 aa16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 MAP4K2Q12851 820 aa16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 CASP8Q14790 479 aa16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 RFTN2Q52LD8 501 aaPredicted RBP16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 RNFT1Q5M7Z0 435 aa16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 OPN5Q6U736 354 aa16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 TICAM1Q8IUC6 712 aa16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 SULF2Q8IWU5 870 aa16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 VWA5B2Q8N398 1253 aa16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 CPSF7Q8N684 471 aaKnown RBP16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 PSD4Q8NDX1 1056 aa16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 SIMC1Q8NDZ2 872 aa16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 OR7G1Q8NGA0 311 aa16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 SLC22A8Q8TCC7 542 aa16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 METTL2AQ96IZ6 378 aaKnown RBP16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 EGLN2Q96KS0 407 aa16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 TSPAN10Q9H1Z9 355 aaPredicted RBP16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 OR10A5Q9H207 317 aa16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 TMBIM4Q9HC24 238 aa16.61■□□□□ 0.25
SNRPA1-201ENST00000254193 MYNNQ9NPC7 610 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms