RNA–Protein interactions for RNA: YPL163C

SVS1, Transcript of Cell wall and vacuolar protein, yeast

Gene SVS1, Length 783 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SVS1	YPL163C	CHA4	P43634	648 aa		4.29	□□□□□ -1.72
SVS1	YPL163C	SHE9	Q04172	456 aa		4.29	□□□□□ -1.72
SVS1	YPL163C	WHI4	Q07655	649 aa	Known RBP	4.29	□□□□□ -1.72
SVS1	YPL163C	DEF1	P35732	738 aa	Known RBP	4.28	□□□□□ -1.72
SVS1	YPL163C	ECM21	P38167	1117 aa	Known RBP	4.28	□□□□□ -1.72
SVS1	YPL163C	GIC1	P38785	314 aa		4.28	□□□□□ -1.72
SVS1	YPL163C	SPF1	P39986	1215 aa	Known RBP	4.28	□□□□□ -1.72
SVS1	YPL163C	NPP2	P39997	493 aa		4.28	□□□□□ -1.72
SVS1	YPL163C	SFB2	P53953	876 aa		4.28	□□□□□ -1.72
SVS1	YPL163C	SRT1	Q03175	343 aa		4.28	□□□□□ -1.72
SVS1	YPL163C	CDA1	Q06702	301 aa		4.28	□□□□□ -1.72
SVS1	YPL163C	YLL058W	Q12198	575 aa		4.28	□□□□□ -1.72
SVS1	YPL163C	CDC12	P32468	407 aa	Known RBP	4.27	□□□□□ -1.73
SVS1	YPL163C	STE5	P32917	917 aa		4.27	□□□□□ -1.73
SVS1	YPL163C	MRP8	P35719	219 aa		4.27	□□□□□ -1.73
SVS1	YPL163C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	not detected
SVS1	YPL163C	CTF4	Q01454	927 aa		4.27	□□□□□ -1.73
SVS1	YPL163C	DUS3	Q06053	668 aa	Known RBP	4.27	□□□□□ -1.73
SVS1	YPL163C	TDA5	Q06417	326 aa	Known RBP	4.27	□□□□□ -1.73
SVS1	YPL163C	KCS1	Q12494	1050 aa		4.27	□□□□□ -1.73
SVS1	YPL163C	SPE1	P08432	466 aa		4.26	□□□□□ -1.73
SVS1	YPL163C	PFK1	P16861	987 aa	Known RBP	4.26	□□□□□ -1.73
SVS1	YPL163C	AIM39	Q08223	395 aa		4.26	□□□□□ -1.73
SVS1	YPL163C	SSF2	Q12153	453 aa	Predicted RBP	4.26	□□□□□ -1.73
SVS1	YPL163C	TAD3	Q9URQ3	322 aa		4.26	□□□□□ -1.73
SVS1	YPL163C	HSF1	P10961	833 aa		4.25	□□□□□ -1.73
SVS1	YPL163C	HRR25	P29295	494 aa	Known RBP	4.25	□□□□□ -1.73
SVS1	YPL163C	FUN30	P31380	1131 aa		4.25	□□□□□ -1.73
SVS1	YPL163C	PBY1	P38254	753 aa		4.25	□□□□□ -1.73
SVS1	YPL163C	CCC2	P38995	1004 aa		4.25	□□□□□ -1.73
SVS1	YPL163C	EXG2	P52911	562 aa		4.25	□□□□□ -1.73
SVS1	YPL163C	SRP1	Q02821	542 aa	Known RBP	4.25	□□□□□ -1.73
SVS1	YPL163C	YDR306C	Q06640	478 aa		4.25	□□□□□ -1.73
SVS1	YPL163C	CAD1	P24813	409 aa	Known RBP	4.24	□□□□□ -1.73
SVS1	YPL163C	YBR184W	P38299	523 aa		4.24	□□□□□ -1.73
SVS1	YPL163C	CHS7	P38843	316 aa		4.24	□□□□□ -1.73
SVS1	YPL163C	IRR1	P40541	1150 aa		4.24	□□□□□ -1.73
SVS1	YPL163C	NOP7	P53261	605 aa	Known RBP	4.24	□□□□□ -1.73
SVS1	YPL163C	GIS1	Q03833	894 aa		4.24	□□□□□ -1.73
SVS1	YPL163C	YPR196W	Q06595	470 aa		4.24	□□□□□ -1.73
SVS1	YPL163C	NPC2	Q12408	173 aa		4.24	□□□□□ -1.73
SVS1	YPL163C	GRX1	P25373	110 aa	Known RBP	4.23	□□□□□ -1.73
SVS1	YPL163C	IOC3	P43596	787 aa		4.23	□□□□□ -1.73
SVS1	YPL163C	PSP2	P50109	593 aa	Known RBP	4.23	□□□□□ -1.73
SVS1	YPL163C	WRS1	Q12109	432 aa	Known RBP	4.23	□□□□□ -1.73
SVS1	YPL163C	LAS17	Q12446	633 aa		4.23	□□□□□ -1.73
SVS1	YPL163C	NPP1	P25353	742 aa		4.22	□□□□□ -1.73
SVS1	YPL163C	KAR4	P25583	335 aa		4.22	□□□□□ -1.73
SVS1	YPL163C	PPH3	P32345	308 aa		4.22	□□□□□ -1.73
SVS1	YPL163C	AFR1	P33304	620 aa		4.22	□□□□□ -1.73
SVS1	YPL163C	PFD1	P46988	109 aa		4.22	□□□□□ -1.73
SVS1	YPL163C	GYP7	P48365	746 aa		4.22	□□□□□ -1.73
SVS1	YPL163C	NCS6	P53088	359 aa		4.22	□□□□□ -1.73
SVS1	YPL163C	AAR2	P32357	355 aa	Predicted RBP	4.21	□□□□□ -1.74
SVS1	YPL163C	HBS1	P32769	611 aa	Known RBP	4.21	□□□□□ -1.74
SVS1	YPL163C	TSL1	P38427	1098 aa	Known RBP	4.21	□□□□□ -1.74
SVS1	YPL163C	YER158C	P40095	573 aa		4.21	□□□□□ -1.74
SVS1	YPL163C	FMP25	Q08023	583 aa		4.21	□□□□□ -1.74
SVS1	YPL163C	PRP9	P19736	530 aa	Known RBP	4.2	□□□□□ -1.74
SVS1	YPL163C	ERT1	P38140	529 aa		4.2	□□□□□ -1.74
SVS1	YPL163C	SUL1	P38359	859 aa		4.2	□□□□□ -1.74
SVS1	YPL163C	NAN1	Q02931	896 aa	Known RBP	4.2	□□□□□ -1.74
SVS1	YPL163C	RAD53	P22216	821 aa		4.19	□□□□□ -1.74
SVS1	YPL163C	YKR078W	P36158	585 aa	Known RBP	4.19	□□□□□ -1.74
SVS1	YPL163C	YRO2	P38079	344 aa		4.19	□□□□□ -1.74
SVS1	YPL163C	SIT1	P39980	628 aa		4.19	□□□□□ -1.74
SVS1	YPL163C	URM1	P40554	99 aa	Predicted RBP	4.19	□□□□□ -1.74
SVS1	YPL163C	ALR2	P43553	858 aa		4.19	□□□□□ -1.74
SVS1	YPL163C	YMR206W	Q03695	313 aa		4.19	□□□□□ -1.74
SVS1	YPL163C	URN1	Q06525	465 aa	Known RBP	4.19	□□□□□ -1.74
SVS1	YPL163C	UBX5	Q06682	500 aa		4.19	□□□□□ -1.74
SVS1	YPL163C	PPM2	Q08282	695 aa		4.19	□□□□□ -1.74
SVS1	YPL163C	ADE8	P04161	214 aa		4.18	□□□□□ -1.74
SVS1	YPL163C	RPP2A	P05319	106 aa	Known RBP	4.18	□□□□□ -1.74
SVS1	YPL163C	CDC48	P25694	835 aa	Known RBP	4.18	□□□□□ -1.74
SVS1	YPL163C	RPL8B	P29453	256 aa	Known RBP	4.18	□□□□□ -1.74
SVS1	YPL163C	RPC82	P32349	654 aa		4.18	□□□□□ -1.74
SVS1	YPL163C	YKE2	P52553	114 aa		4.18	□□□□□ -1.74
SVS1	YPL163C	UTP8	P53276	713 aa	Known RBP	4.18	□□□□□ -1.74
SVS1	YPL163C	TPO2	P53283	614 aa		4.18	□□□□□ -1.74
SVS1	YPL163C	BUL2	Q03758	920 aa	Known RBP	4.18	□□□□□ -1.74
SVS1	YPL163C	SSL1	Q04673	461 aa	Predicted RBP	4.18	□□□□□ -1.74
SVS1	YPL163C	YLR040C	Q07988	224 aa		4.18	□□□□□ -1.74
SVS1	YPL163C	UPC2	Q12151	913 aa		4.18	□□□□□ -1.74
SVS1	YPL163C	RAD4	P14736	754 aa		4.17	□□□□□ -1.74
SVS1	YPL163C	SED4	P25365	1065 aa		4.17	□□□□□ -1.74
SVS1	YPL163C	EFT1	P32324	842 aa	Known RBP	4.17	□□□□□ -1.74
SVS1	YPL163C	YBR238C	P38330	731 aa	Known RBP	4.17	□□□□□ -1.74
SVS1	YPL163C	EAF1	Q06337	982 aa		4.17	□□□□□ -1.74
SVS1	YPL163C	NOT3	P06102	836 aa	Known RBP	4.16	□□□□□ -1.74
SVS1	YPL163C	RPD3	P32561	433 aa		4.16	□□□□□ -1.74
SVS1	YPL163C	YBR284W	P38150	797 aa		4.16	□□□□□ -1.74
SVS1	YPL163C	MOH1	P38191	138 aa		4.16	□□□□□ -1.74
SVS1	YPL163C	TOK1	P40310	691 aa		4.16	□□□□□ -1.74
SVS1	YPL163C	UBA2	P52488	636 aa		4.16	□□□□□ -1.74
SVS1	YPL163C	RAI1	P53063	387 aa	Known RBP	4.16	□□□□□ -1.74
SVS1	YPL163C	SPO75	Q07798	868 aa		4.16	□□□□□ -1.74
SVS1	YPL163C	YOL073C	Q08232	322 aa		4.16	□□□□□ -1.74
SVS1	YPL163C	YPR071W	Q12346	211 aa		4.16	□□□□□ -1.74
SVS1	YPL163C	ATG19	P35193	415 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms