RNA–Protein interactions for RNA: YPL124W

SPC29, Transcript of Inner plaque spindle pole body (SPB) component, yeast

Gene SPC29, Length 762 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPC29	YPL124W	ENB1	Q08299	606 aa		4.87	□□□□□ -1.63
SPC29	YPL124W	CDC12	P32468	407 aa	Known RBP	4.86	□□□□□ -1.63
SPC29	YPL124W	SNF7	P39929	240 aa	Known RBP	4.86	□□□□□ -1.63
SPC29	YPL124W	AGP1	P25376	633 aa		4.85	□□□□□ -1.63
SPC29	YPL124W	HRR25	P29295	494 aa	Known RBP	4.85	□□□□□ -1.63
SPC29	YPL124W	RPC82	P32349	654 aa		4.85	□□□□□ -1.63
SPC29	YPL124W	ABD1	P32783	436 aa	Predicted RBP	4.85	□□□□□ -1.63
SPC29	YPL124W	ATG19	P35193	415 aa		4.85	□□□□□ -1.63
SPC29	YPL124W	YPT53	P36019	220 aa		4.85	□□□□□ -1.63
SPC29	YPL124W	SAH1	P39954	449 aa	Known RBP	4.85	□□□□□ -1.63
SPC29	YPL124W	BUL1	P48524	976 aa		4.85	□□□□□ -1.63
SPC29	YPL124W	GUP2	Q08929	609 aa		4.85	□□□□□ -1.63
SPC29	YPL124W	NPC2	Q12408	173 aa		4.85	□□□□□ -1.63
SPC29	YPL124W	SBA1	P28707	216 aa	Known RBP	4.84	□□□□□ -1.63
SPC29	YPL124W	CCC2	P38995	1004 aa		4.84	□□□□□ -1.63
SPC29	YPL124W	MBP1	P39678	833 aa		4.84	□□□□□ -1.63
SPC29	YPL124W	GYP7	P48365	746 aa		4.84	□□□□□ -1.63
SPC29	YPL124W	PSP2	P50109	593 aa	Known RBP	4.84	□□□□□ -1.63
SPC29	YPL124W	SFB2	P53953	876 aa		4.84	□□□□□ -1.63
SPC29	YPL124W	WHI4	Q07655	649 aa	Known RBP	4.84	□□□□□ -1.63
SPC29	YPL124W	AIM39	Q08223	395 aa		4.84	□□□□□ -1.63
SPC29	YPL124W	KAR4	P25583	335 aa		4.83	□□□□□ -1.64
SPC29	YPL124W	GDE1	Q02979	1223 aa		4.83	□□□□□ -1.64
SPC29	YPL124W	UPC2	Q12151	913 aa		4.83	□□□□□ -1.64
SPC29	YPL124W	STE14	P32584	239 aa		4.82	□□□□□ -1.64
SPC29	YPL124W	OAR1	P35731	278 aa		4.82	□□□□□ -1.64
SPC29	YPL124W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
SPC29	YPL124W	SRP1	Q02821	542 aa	Known RBP	4.82	□□□□□ -1.64
SPC29	YPL124W	MOH1	P38191	138 aa		4.81	□□□□□ -1.64
SPC29	YPL124W	YBR238C	P38330	731 aa	Known RBP	4.81	□□□□□ -1.64
SPC29	YPL124W	YKE2	P52553	114 aa		4.81	□□□□□ -1.64
SPC29	YPL124W	PPM2	Q08282	695 aa		4.81	□□□□□ -1.64
SPC29	YPL124W	EFT1	P32324	842 aa	Known RBP	4.8	□□□□□ -1.64
SPC29	YPL124W	YKR078W	P36158	585 aa	Known RBP	4.8	□□□□□ -1.64
SPC29	YPL124W	TSL1	P38427	1098 aa	Known RBP	4.8	□□□□□ -1.64
SPC29	YPL124W	KRI1	P42846	591 aa	Known RBP	4.8	□□□□□ -1.64
SPC29	YPL124W	VPS16	Q03308	798 aa		4.8	□□□□□ -1.64
SPC29	YPL124W	SHE9	Q04172	456 aa		4.8	□□□□□ -1.64
SPC29	YPL124W	PIN2	Q12057	282 aa		4.8	□□□□□ -1.64
SPC29	YPL124W	VBA5	P36172	582 aa		4.79	□□□□□ -1.64
SPC29	YPL124W	SLU7	Q02775	382 aa	Known RBP	4.79	□□□□□ -1.64
SPC29	YPL124W	DUS3	Q06053	668 aa	Known RBP	4.79	□□□□□ -1.64
SPC29	YPL124W	CLN2	P20438	545 aa		4.78	□□□□□ -1.64
SPC29	YPL124W	YLR040C	Q07988	224 aa		4.78	□□□□□ -1.64
SPC29	YPL124W	OPI10	Q08202	246 aa		4.78	□□□□□ -1.64
SPC29	YPL124W	FAL1	Q12099	399 aa	Known RBP	4.78	□□□□□ -1.64
SPC29	YPL124W	TRP4	P07285	380 aa	Predicted RBP	4.77	□□□□□ -1.65
SPC29	YPL124W	FBP1	P09201	348 aa		4.77	□□□□□ -1.65
SPC29	YPL124W	AFR1	P33304	620 aa		4.77	□□□□□ -1.65
SPC29	YPL124W	KTR4	P38131	464 aa		4.77	□□□□□ -1.65
SPC29	YPL124W	YER158C	P40095	573 aa		4.77	□□□□□ -1.65
SPC29	YPL124W	ERG5	P54781	538 aa		4.77	□□□□□ -1.65
SPC29	YPL124W	YOL073C	Q08232	322 aa		4.77	□□□□□ -1.65
SPC29	YPL124W	NPP1	P25353	742 aa		4.76	□□□□□ -1.65
SPC29	YPL124W	RAI1	P53063	387 aa	Known RBP	4.76	□□□□□ -1.65
SPC29	YPL124W	NAP1	P25293	417 aa	Known RBP	4.75	□□□□□ -1.65
SPC29	YPL124W	ERG4	P25340	473 aa		4.75	□□□□□ -1.65
SPC29	YPL124W	YKL069W	P36088	180 aa		4.75	□□□□□ -1.65
SPC29	YPL124W	SVF1	Q05515	481 aa		4.75	□□□□□ -1.65
SPC29	YPL124W	CDC48	P25694	835 aa	Known RBP	4.74	□□□□□ -1.65
SPC29	YPL124W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
SPC29	YPL124W	NOT3	P06102	836 aa	Known RBP	4.73	□□□□□ -1.65
SPC29	YPL124W	CAD1	P24813	409 aa	Known RBP	4.73	□□□□□ -1.65
SPC29	YPL124W	SED4	P25365	1065 aa		4.73	□□□□□ -1.65
SPC29	YPL124W	SIT1	P39980	628 aa		4.73	□□□□□ -1.65
SPC29	YPL124W	MAD1	P40957	749 aa		4.73	□□□□□ -1.65
SPC29	YPL124W	CWC24	P53769	259 aa		4.73	□□□□□ -1.65
SPC29	YPL124W	YPR196W	Q06595	470 aa		4.73	□□□□□ -1.65
SPC29	YPL124W	YDR306C	Q06640	478 aa		4.73	□□□□□ -1.65
SPC29	YPL124W	STE13	P33894	931 aa		4.72	□□□□□ -1.65
SPC29	YPL124W	MRP8	P35719	219 aa		4.72	□□□□□ -1.65
SPC29	YPL124W	SUL1	P38359	859 aa		4.72	□□□□□ -1.65
SPC29	YPL124W	BUL2	Q03758	920 aa	Known RBP	4.72	□□□□□ -1.65
SPC29	YPL124W	TMN2	Q04562	672 aa		4.72	□□□□□ -1.65
SPC29	YPL124W	SSL1	Q04673	461 aa	Predicted RBP	4.72	□□□□□ -1.65
SPC29	YPL124W	TRM13	Q12383	476 aa		4.72	□□□□□ -1.65
SPC29	YPL124W	PBY1	P38254	753 aa		4.71	□□□□□ -1.66
SPC29	YPL124W	UBA2	P52488	636 aa		4.71	□□□□□ -1.66
SPC29	YPL124W	ADE8	P04161	214 aa		4.7	□□□□□ -1.66
SPC29	YPL124W	PRI2	P20457	528 aa		4.7	□□□□□ -1.66
SPC29	YPL124W	SEC21	P32074	935 aa	Known RBP	4.7	□□□□□ -1.66
SPC29	YPL124W	SDP1	P40479	209 aa		4.7	□□□□□ -1.66
SPC29	YPL124W	STB4	P50104	949 aa		4.7	□□□□□ -1.66
SPC29	YPL124W	PPH3	P32345	308 aa		4.69	□□□□□ -1.66
SPC29	YPL124W	STE5	P32917	917 aa		4.69	□□□□□ -1.66
SPC29	YPL124W	IRR1	P40541	1150 aa		4.69	□□□□□ -1.66
SPC29	YPL124W	QRI1	P43123	477 aa	Known RBP	4.69	□□□□□ -1.66
SPC29	YPL124W	RNT1	Q02555	471 aa		4.69	□□□□□ -1.66
SPC29	YPL124W	YML122C	Q03207	126 aa		4.69	□□□□□ -1.66
SPC29	YPL124W	OMS1	Q06668	471 aa		4.69	□□□□□ -1.66
SPC29	YPL124W	ALG7	P07286	448 aa		4.68	□□□□□ -1.66
SPC29	YPL124W	AAR2	P32357	355 aa	Predicted RBP	4.68	□□□□□ -1.66
SPC29	YPL124W	HBS1	P32769	611 aa	Known RBP	4.68	□□□□□ -1.66
SPC29	YPL124W	YRO2	P38079	344 aa		4.68	□□□□□ -1.66
SPC29	YPL124W	CTF8	P38877	133 aa		4.68	□□□□□ -1.66
SPC29	YPL124W	SPF1	P39986	1215 aa	Known RBP	4.68	□□□□□ -1.66
SPC29	YPL124W	HDA1	P53973	706 aa		4.68	□□□□□ -1.66
SPC29	YPL124W	MCH5	Q08777	521 aa		4.68	□□□□□ -1.66
SPC29	YPL124W	PPR1	P07272	904 aa	Predicted RBP	4.67	□□□□□ -1.66
SPC29	YPL124W	TUB3	P09734	445 aa	Known RBP	4.67	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 218.8 ms