RNA–Protein interactions for RNA: YOL145C

CTR9, Transcript of Component of the Paf1p complex involved in transcription elongation, yeastyeast

Gene CTR9, Length 3,234 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTR9YOL145C PIF1P07271 859 aa2.22□□□□□ -2.05
CTR9YOL145C YCL002CP25565 263 aa2.22□□□□□ -2.05
CTR9YOL145C REC104P33323 182 aa2.22□□□□□ -2.05
CTR9YOL145C TFC4P33339 1025 aa2.22□□□□□ -2.05
CTR9YOL145C EMC3P36039 253 aa2.22□□□□□ -2.05
CTR9YOL145C PCM1P38628 557 aaKnown RBP2.22□□□□□ -2.05
CTR9YOL145C GAR1P28007 205 aaKnown RBP2.21□□□□□ -2.06
CTR9YOL145C NNK1P36003 928 aa2.21□□□□□ -2.06
CTR9YOL145C TPO2P53283 614 aa2.21□□□□□ -2.06
CTR9YOL145C DSE4P53753 1117 aa2.21□□□□□ -2.06
CTR9YOL145C SRP1Q02821 542 aaKnown RBP2.21□□□□□ -2.06
CTR9YOL145C HOS3Q02959 697 aaKnown RBP2.21□□□□□ -2.06
CTR9YOL145C SRT1Q03175 343 aa2.21□□□□□ -2.06
CTR9YOL145C LRS4Q04087 347 aaKnown RBP2.21□□□□□ -2.06
CTR9YOL145C YDR338CQ05497 695 aa2.21□□□□□ -2.06
CTR9YOL145C ATG33Q06485 197 aa2.21□□□□□ -2.06
CTR9YOL145C RPS4AP0CX35 261 aaKnown RBP2.21□□□□□ -2.06
CTR9YOL145C RPS4BP0CX36 261 aaKnown RBP2.21□□□□□ -2.06
CTR9YOL145C GSY1P23337 708 aa2.21□□□□□ -2.06
CTR9YOL145C NAM7P30771 971 aaKnown RBP2.21□□□□□ -2.06
CTR9YOL145C PRP19P32523 503 aaKnown RBP2.21□□□□□ -2.06
CTR9YOL145C FUI1P38196 639 aa2.21□□□□□ -2.06
CTR9YOL145C RPN3P40016 523 aaKnown RBP2.21□□□□□ -2.06
CTR9YOL145C CAF16P43569 289 aa2.21□□□□□ -2.06
CTR9YOL145C UBC9P50623 157 aaPredicted RBP2.21□□□□□ -2.06
CTR9YOL145C YKE2P52553 114 aa2.21□□□□□ -2.06
CTR9YOL145C ATP25Q03153 612 aa2.21□□□□□ -2.06
CTR9YOL145C YLL054CQ12244 843 aa2.21□□□□□ -2.06
CTR9YOL145C SAM35P14693 329 aa2.21□□□□□ -2.06
CTR9YOL145C HXT16P47185 567 aa2.21□□□□□ -2.06
CTR9YOL145C GYP7P48365 746 aa2.21□□□□□ -2.06
CTR9YOL145C BUD9P53226 547 aa2.21□□□□□ -2.06
CTR9YOL145C NBA1Q08229 501 aaKnown RBP2.21□□□□□ -2.06
CTR9YOL145C SLX4Q12098 748 aa2.21□□□□□ -2.06
CTR9YOL145C ABZ1P37254 787 aaPredicted RBP2.2□□□□□ -2.06
CTR9YOL145C YER158CP40095 573 aa2.2□□□□□ -2.06
CTR9YOL145C HFM1P51979 1187 aa2.2□□□□□ -2.06
CTR9YOL145C PEX14P53112 341 aa2.2□□□□□ -2.06
CTR9YOL145C TNA1P53322 534 aa2.2□□□□□ -2.06
CTR9YOL145C HRK1Q08732 759 aaKnown RBP2.2□□□□□ -2.06
CTR9YOL145C YVC1Q12324 675 aa2.2□□□□□ -2.06
CTR9YOL145C TRK2P28584 889 aa2.2□□□□□ -2.06
CTR9YOL145C HIR1P32479 840 aa2.2□□□□□ -2.06
CTR9YOL145C WHI3P34761 661 aaKnown RBP2.2□□□□□ -2.06
CTR9YOL145C OAF1P39720 1047 aaPredicted RBP2.2□□□□□ -2.06
CTR9YOL145C BOI2P39969 1040 aa2.2□□□□□ -2.06
CTR9YOL145C PRY1P47032 299 aa2.2□□□□□ -2.06
CTR9YOL145C MAP1Q01662 387 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06not detected
CTR9YOL145C GUD1Q07729 489 aa2.2□□□□□ -2.06
CTR9YOL145C Q0142Q9ZZW4 58 aa2.2□□□□□ -2.06
CTR9YOL145C ACE2P21192 770 aa2.19□□□□□ -2.06
CTR9YOL145C SER1P33330 395 aaKnown RBP2.19□□□□□ -2.06
CTR9YOL145C STO1P34160 861 aaKnown RBP2.19□□□□□ -2.06
CTR9YOL145C YFL066CP43538 392 aa2.19□□□□□ -2.06
CTR9YOL145C CCM1P48237 864 aaPredicted RBP2.19□□□□□ -2.06
CTR9YOL145C TAD1P53065 400 aa2.19□□□□□ -2.06
CTR9YOL145C SDH1Q00711 640 aa2.19□□□□□ -2.06
CTR9YOL145C HFD1Q04458 532 aa2.19□□□□□ -2.06
CTR9YOL145C DAL7P21826 554 aa2.19□□□□□ -2.06
CTR9YOL145C HOG1P32485 435 aa2.19□□□□□ -2.06
CTR9YOL145C CKB2P38930 258 aa2.19□□□□□ -2.06
CTR9YOL145C HDA1P53973 706 aa2.19□□□□□ -2.06
CTR9YOL145C GUP2Q08929 609 aa2.19□□□□□ -2.06
CTR9YOL145C GIN4Q12263 1142 aa2.19□□□□□ -2.06
CTR9YOL145C TMA7Q3E764 64 aaKnown RBP2.19□□□□□ -2.06
CTR9YOL145C RPS21AP0C0V8 87 aaKnown RBP2.19□□□□□ -2.06
CTR9YOL145C RPD3P32561 433 aa2.19□□□□□ -2.06
CTR9YOL145C DAS1P47005 663 aa2.19□□□□□ -2.06
CTR9YOL145C YNR014WP53719 212 aa2.19□□□□□ -2.06
CTR9YOL145C SNP1Q00916 300 aaPredicted RBP2.19□□□□□ -2.06
CTR9YOL145C CDC48P25694 835 aaKnown RBP2.18□□□□□ -2.06
CTR9YOL145C AKR1P39010 764 aa2.18□□□□□ -2.06
CTR9YOL145C SLN1P39928 1220 aaPredicted RBP2.18□□□□□ -2.06
CTR9YOL145C GPP2P40106 250 aaKnown RBP2.18□□□□□ -2.06
CTR9YOL145C DAM1P53267 343 aa2.18□□□□□ -2.06
CTR9YOL145C ECM9Q02202 377 aa2.18□□□□□ -2.06
CTR9YOL145C YDR514CQ04408 483 aa2.18□□□□□ -2.06
CTR9YOL145C TDA6Q06466 467 aa2.18□□□□□ -2.06
CTR9YOL145C RIB2Q12362 591 aaKnown RBP2.18□□□□□ -2.06
CTR9YOL145C YBR182C-AQ8TGU6 64 aa2.18□□□□□ -2.06
CTR9YOL145C AI3P03877 415 aa2.18□□□□□ -2.06
CTR9YOL145C MPH2P0CD99 609 aa2.18□□□□□ -2.06
CTR9YOL145C SST2P11972 698 aaKnown RBP2.18□□□□□ -2.06
CTR9YOL145C APA1P16550 321 aaKnown RBP2.18□□□□□ -2.06
CTR9YOL145C FUN30P31380 1131 aa2.18□□□□□ -2.06
CTR9YOL145C CCR4P31384 837 aaKnown RBP2.18□□□□□ -2.06
CTR9YOL145C YHL012WP38709 493 aa2.18□□□□□ -2.06
CTR9YOL145C PIK1P39104 1066 aa2.18□□□□□ -2.06
CTR9YOL145C NIT2P47016 307 aa2.18□□□□□ -2.06
CTR9YOL145C ALY2P47029 1046 aa2.18□□□□□ -2.06
CTR9YOL145C YPR196WQ06595 470 aa2.18□□□□□ -2.06
CTR9YOL145C TRE2Q08693 809 aa2.18□□□□□ -2.06
CTR9YOL145C YLL058WQ12198 575 aa2.18□□□□□ -2.06
CTR9YOL145C RPS21BQ3E754 87 aaKnown RBP2.18□□□□□ -2.06
CTR9YOL145C YEF3P16521 1044 aaKnown RBP2.17□□□□□ -2.06
CTR9YOL145C TRX2P22803 104 aaKnown RBP2.17□□□□□ -2.06
CTR9YOL145C YEL1P34225 687 aa2.17□□□□□ -2.06
CTR9YOL145C YKR078WP36158 585 aaKnown RBP2.17□□□□□ -2.06
CTR9YOL145C HXT6P39003 570 aaKnown RBP2.17□□□□□ -2.06
CTR9YOL145C HXT7P39004 570 aa2.17□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 37.9 ms