RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C CYC8P14922 966 aa3.67□□□□□ -1.82
SSN8YNL025C OPI1P21957 404 aa3.67□□□□□ -1.82
SSN8YNL025C GRX1P25373 110 aaKnown RBP3.67□□□□□ -1.82
SSN8YNL025C MTC2P34246 357 aa3.67□□□□□ -1.82
SSN8YNL025C CNN1P43618 361 aa3.67□□□□□ -1.82
SSN8YNL025C MEH1Q02205 184 aa3.67□□□□□ -1.82
SSN8YNL025C RAT1Q02792 1006 aaKnown RBP3.67□□□□□ -1.82
SSN8YNL025C ROD1Q02805 837 aa3.67□□□□□ -1.82
SSN8YNL025C RXT3Q07458 294 aa3.67□□□□□ -1.82
SSN8YNL025C NYV1Q12255 253 aa3.67□□□□□ -1.82
SSN8YNL025C TMA7Q3E764 64 aaKnown RBP3.67□□□□□ -1.82
SSN8YNL025C KIN2P13186 1147 aaKnown RBP3.66□□□□□ -1.82
SSN8YNL025C SYP1P25623 870 aaKnown RBP3.66□□□□□ -1.82
SSN8YNL025C RAD27P26793 382 aa3.66□□□□□ -1.82
SSN8YNL025C THI4P32318 326 aa3.66□□□□□ -1.82
SSN8YNL025C SFP1P32432 683 aa3.66□□□□□ -1.82
SSN8YNL025C PET112P33893 541 aa3.66□□□□□ -1.82
SSN8YNL025C FYV10P40492 516 aa3.66□□□□□ -1.82
SSN8YNL025C HUL5P53119 910 aa3.66□□□□□ -1.82
SSN8YNL025C PLB2Q03674 706 aa3.66□□□□□ -1.82
SSN8YNL025C RLP24Q07915 199 aaKnown RBP3.66□□□□□ -1.82
SSN8YNL025C RTP1Q12751 981 aa3.66□□□□□ -1.82
SSN8YNL025C NOP14Q99207 810 aaKnown RBP3.66□□□□□ -1.82
SSN8YNL025C INH1P01097 85 aa3.65□□□□□ -1.83
SSN8YNL025C CDC6P09119 513 aa3.65□□□□□ -1.83
SSN8YNL025C DBP5P20449 482 aaKnown RBP3.65□□□□□ -1.83
SSN8YNL025C CDC20P26309 610 aa3.65□□□□□ -1.83
SSN8YNL025C TRM2P33753 639 aa3.65□□□□□ -1.83
SSN8YNL025C PEX8P53248 589 aa3.65□□□□□ -1.83
SSN8YNL025C GDE1Q02979 1223 aa3.65□□□□□ -1.83
SSN8YNL025C ACK1Q07622 623 aaPredicted RBP3.65□□□□□ -1.83
SSN8YNL025C PPM2Q08282 695 aa3.65□□□□□ -1.83
SSN8YNL025C GAL10P04397 699 aa3.64□□□□□ -1.83
SSN8YNL025C YER152CP10356 443 aa3.64□□□□□ -1.83
SSN8YNL025C HSC82P15108 705 aaKnown RBP3.64□□□□□ -1.83
SSN8YNL025C SWI3P32591 825 aa3.64□□□□□ -1.83
SSN8YNL025C GGA2P38817 585 aaKnown RBP3.64□□□□□ -1.83
SSN8YNL025C SNF7P39929 240 aaKnown RBP3.64□□□□□ -1.83
SSN8YNL025C MPH1P40562 993 aa3.64□□□□□ -1.83
SSN8YNL025C MNN10P50108 393 aaKnown RBP3.64□□□□□ -1.83
SSN8YNL025C VPS62P53285 467 aa3.64□□□□□ -1.83
SSN8YNL025C CWC22P53333 577 aaKnown RBP3.64□□□□□ -1.83
SSN8YNL025C YNR029CP53729 429 aaKnown RBP3.64□□□□□ -1.83
SSN8YNL025C MDM1Q01846 1127 aa3.64□□□□□ -1.83
SSN8YNL025C NAN1Q02931 896 aaKnown RBP3.64□□□□□ -1.83
SSN8YNL025C YML122CQ03207 126 aa3.64□□□□□ -1.83
SSN8YNL025C ROT1Q03691 256 aa3.64□□□□□ -1.83
SSN8YNL025C SPR28Q04921 423 aa3.64□□□□□ -1.83
SSN8YNL025C GPB1Q08886 897 aa3.64□□□□□ -1.83
SSN8YNL025C YOR378WQ08902 515 aa3.64□□□□□ -1.83
SSN8YNL025C PUS9Q12069 462 aa3.64□□□□□ -1.83
SSN8YNL025C SVS1Q12254 260 aa3.64□□□□□ -1.83
SSN8YNL025C RIB2Q12362 591 aaKnown RBP3.64□□□□□ -1.83
SSN8YNL025C CMP2P14747 604 aa3.63□□□□□ -1.83
SSN8YNL025C MCM2P29469 868 aa3.63□□□□□ -1.83
SSN8YNL025C MLS1P30952 554 aa3.63□□□□□ -1.83
SSN8YNL025C PTH2P34222 208 aa3.63□□□□□ -1.83
SSN8YNL025C EBP2P36049 427 aaKnown RBP3.63□□□□□ -1.83
SSN8YNL025C RRT14P40470 206 aa3.63□□□□□ -1.83
SSN8YNL025C SRB7P47822 140 aa3.63□□□□□ -1.83
SSN8YNL025C SPC19Q03954 165 aa3.63□□□□□ -1.83
SSN8YNL025C MRL1Q06815 381 aa3.63□□□□□ -1.83
SSN8YNL025C GCR1P07261 785 aa3.62□□□□□ -1.83
SSN8YNL025C ACE2P21192 770 aa3.62□□□□□ -1.83
SSN8YNL025C PMI40P29952 429 aaKnown RBP3.62□□□□□ -1.83
SSN8YNL025C NFU1P32860 256 aa3.62□□□□□ -1.83
SSN8YNL025C LST4P34239 828 aa3.62□□□□□ -1.83
SSN8YNL025C MAL31P38156 614 aa3.62□□□□□ -1.83
SSN8YNL025C RPS26AP39938 119 aaKnown RBP3.62□□□□□ -1.83
SSN8YNL025C RPS26BP39939 119 aaKnown RBP3.62□□□□□ -1.83
SSN8YNL025C VID27P40157 782 aa3.62□□□□□ -1.83
SSN8YNL025C TIM54P47045 478 aa3.62□□□□□ -1.83
SSN8YNL025C PMT3P47190 753 aa3.62□□□□□ -1.83
SSN8YNL025C SVL3Q03088 825 aaKnown RBP3.62□□□□□ -1.83
SSN8YNL025C MSC2Q03455 724 aa3.62□□□□□ -1.83
SSN8YNL025C TDA5Q06417 326 aaKnown RBP3.62□□□□□ -1.83
SSN8YNL025C SPO75Q07798 868 aa3.62□□□□□ -1.83
SSN8YNL025C GNT1Q12096 491 aa3.62□□□□□ -1.83
SSN8YNL025C BAS1P22035 811 aa3.61□□□□□ -1.83
SSN8YNL025C HCM1P25364 564 aa3.61□□□□□ -1.83
SSN8YNL025C GFD2P25370 566 aaKnown RBP3.61□□□□□ -1.83
SSN8YNL025C APL1P27351 700 aa3.61□□□□□ -1.83
SSN8YNL025C SSH4P32343 579 aa3.61□□□□□ -1.83
SSN8YNL025C HIR1P32479 840 aa3.61□□□□□ -1.83
SSN8YNL025C MRS6P32864 603 aaKnown RBP3.61□□□□□ -1.83
SSN8YNL025C SAS3P34218 831 aa3.61□□□□□ -1.83
SSN8YNL025C RRN3P36070 627 aa3.61□□□□□ -1.83
SSN8YNL025C TRZ1P36159 838 aaPredicted RBP3.61□□□□□ -1.83
SSN8YNL025C MUM2P38236 366 aa3.61□□□□□ -1.83
SSN8YNL025C GEM1P39722 662 aa3.61□□□□□ -1.83
SSN8YNL025C YFL054CP43549 646 aa3.61□□□□□ -1.83
SSN8YNL025C HLJ1P48353 224 aa3.61□□□□□ -1.83
SSN8YNL025C NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
SSN8YNL025C SXM1Q04175 944 aaKnown RBP3.61□□□□□ -1.83
SSN8YNL025C TSR2Q06672 205 aaKnown RBP3.61□□□□□ -1.83
SSN8YNL025C PSR2Q07949 397 aa3.61□□□□□ -1.83
SSN8YNL025C NOP12Q08208 459 aaKnown RBP3.61□□□□□ -1.83
SSN8YNL025C RTT10Q08924 1013 aa3.61□□□□□ -1.83
SSN8YNL025C ACM1Q08981 209 aa3.61□□□□□ -1.83
SSN8YNL025C TMA46Q12000 345 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms