RNA–Protein interactions for RNA: YKR088C

TVP38, Transcript of Integral membrane protein, yeastyeast

Gene TVP38, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TVP38YKR088C SIZ1Q04195 904 aa5.7□□□□□ -1.5
TVP38YKR088C NOP12Q08208 459 aaKnown RBP5.7□□□□□ -1.5
TVP38YKR088C HMI1Q12039 706 aa5.7□□□□□ -1.5
TVP38YKR088C VMR1P38735 1592 aa5.7□□□□□ -1.5
TVP38YKR088C NUP192P47054 1683 aa5.69□□□□□ -1.5
TVP38YKR088C DOP1Q03921 1698 aa5.69□□□□□ -1.5
TVP38YKR088C DRS2P39524 1355 aa5.69□□□□□ -1.5
TVP38YKR088C RPP0P05317 312 aaKnown RBP5.69□□□□□ -1.5
TVP38YKR088C IME2P32581 645 aa5.69□□□□□ -1.5
TVP38YKR088C DEF1P35732 738 aaKnown RBP5.69□□□□□ -1.5
TVP38YKR088C KIN4Q01919 800 aa5.69□□□□□ -1.5
TVP38YKR088C RAT1Q02792 1006 aaKnown RBP5.69□□□□□ -1.5
TVP38YKR088C HXK1P04806 485 aaKnown RBP5.68□□□□□ -1.5
TVP38YKR088C TAF5P38129 798 aa5.68□□□□□ -1.5
TVP38YKR088C RGD1P38339 666 aa5.68□□□□□ -1.5
TVP38YKR088C GCV2P49095 1034 aa5.68□□□□□ -1.5
TVP38YKR088C ROD1Q02805 837 aa5.68□□□□□ -1.5
TVP38YKR088C ESL2P36168 1195 aa5.67□□□□□ -1.5
TVP38YKR088C OPY1P38271 328 aa5.67□□□□□ -1.5
TVP38YKR088C MSS4P38994 779 aa5.67□□□□□ -1.5
TVP38YKR088C VPS27P40343 622 aaKnown RBP5.67□□□□□ -1.5
TVP38YKR088C ATG13Q06628 738 aa5.67□□□□□ -1.5
TVP38YKR088C CDC45Q08032 650 aa5.67□□□□□ -1.5
TVP38YKR088C MET5P47169 1442 aa5.66□□□□□ -1.5
TVP38YKR088C YER152CP10356 443 aa5.66□□□□□ -1.5
TVP38YKR088C MKK2P32491 506 aa5.66□□□□□ -1.5
TVP38YKR088C PPX1P38698 397 aa5.66□□□□□ -1.5
TVP38YKR088C FUN12P39730 1002 aaKnown RBP5.66□□□□□ -1.5
TVP38YKR088C IOC4Q04213 475 aa5.66□□□□□ -1.5
TVP38YKR088C NUP188P52593 1655 aaKnown RBP5.66□□□□□ -1.5
TVP38YKR088C IML1P47170 1584 aa5.65□□□□□ -1.5
TVP38YKR088C PLB1P39105 664 aa5.65□□□□□ -1.5
TVP38YKR088C ENT3P47160 408 aa5.65□□□□□ -1.5
TVP38YKR088C MSC2Q03455 724 aa5.65□□□□□ -1.5
TVP38YKR088C DNF2Q12675 1612 aa5.65□□□□□ -1.51
TVP38YKR088C SCT1P32784 759 aa5.64□□□□□ -1.51
TVP38YKR088C IOC3P43596 787 aa5.64□□□□□ -1.51
TVP38YKR088C SIW14P53965 281 aa5.64□□□□□ -1.51
TVP38YKR088C RVB2Q12464 471 aaKnown RBP5.64□□□□□ -1.51
TVP38YKR088C PRE9P23638 258 aaKnown RBP5.63□□□□□ -1.51
TVP38YKR088C MLS1P30952 554 aa5.63□□□□□ -1.51
TVP38YKR088C RPT1P33299 467 aaKnown RBP5.63□□□□□ -1.51
TVP38YKR088C THI12P42883 340 aa5.63□□□□□ -1.51
TVP38YKR088C THI5P43534 340 aa5.63□□□□□ -1.51
TVP38YKR088C THI11P47183 340 aa5.63□□□□□ -1.51
TVP38YKR088C THI13Q07748 340 aa5.63□□□□□ -1.51
TVP38YKR088C PPM2Q08282 695 aa5.63□□□□□ -1.51
TVP38YKR088C MCD1Q12158 566 aa5.63□□□□□ -1.51
TVP38YKR088C SYP1P25623 870 aaKnown RBP5.62□□□□□ -1.51
TVP38YKR088C PEP7P32609 515 aa5.62□□□□□ -1.51
TVP38YKR088C SIP5P40210 489 aaKnown RBP5.62□□□□□ -1.51
TVP38YKR088C MRPS18P42847 217 aa5.62□□□□□ -1.51
TVP38YKR088C YRB30P53107 440 aaPredicted RBP5.62□□□□□ -1.51
TVP38YKR088C CLC1P17891 233 aa5.61□□□□□ -1.51
TVP38YKR088C SPE2P21182 396 aa5.61□□□□□ -1.51
TVP38YKR088C BAS1P22035 811 aa5.61□□□□□ -1.51
TVP38YKR088C OAR1P35731 278 aa5.61□□□□□ -1.51
TVP38YKR088C CAB3P36076 571 aa5.61□□□□□ -1.51
TVP38YKR088C YIR014WP40570 242 aa5.61□□□□□ -1.51
TVP38YKR088C CNN1P43618 361 aa5.61□□□□□ -1.51
TVP38YKR088C ACE2P21192 770 aa5.6□□□□□ -1.51
TVP38YKR088C SEC8P32855 1065 aa5.6□□□□□ -1.51
TVP38YKR088C FPR3P38911 411 aaKnown RBP5.6□□□□□ -1.51
TVP38YKR088C AIM39Q08223 395 aa5.6□□□□□ -1.51
TVP38YKR088C MLP1Q02455 1875 aaKnown RBP5.6□□□□□ -1.51
TVP38YKR088C SUI2P20459 304 aaKnown RBP5.59□□□□□ -1.51
TVP38YKR088C EBP2P36049 427 aaKnown RBP5.59□□□□□ -1.51
TVP38YKR088C POA1P38218 177 aa5.59□□□□□ -1.51
TVP38YKR088C SSF1P38789 453 aaPredicted RBP5.59□□□□□ -1.51
TVP38YKR088C STM1P39015 273 aaKnown RBP5.59□□□□□ -1.51
TVP38YKR088C MND2P40577 368 aa5.59□□□□□ -1.51
TVP38YKR088C YFR016CP43597 1233 aaKnown RBP5.59□□□□□ -1.51
TVP38YKR088C UBA2P52488 636 aa5.59□□□□□ -1.51
TVP38YKR088C YDL144CQ07589 356 aa5.59□□□□□ -1.51
TVP38YKR088C TPO1Q07824 586 aa5.59□□□□□ -1.51
TVP38YKR088C MSC6Q08818 692 aaKnown RBP5.59□□□□□ -1.51
TVP38YKR088C SNF2P22082 1703 aa5.59□□□□□ -1.51
TVP38YKR088C TRM3Q07527 1436 aa5.58□□□□□ -1.52
TVP38YKR088C YEF3P16521 1044 aaKnown RBP5.58□□□□□ -1.52
TVP38YKR088C MOH1P38191 138 aa5.58□□□□□ -1.52
TVP38YKR088C RRT14P40470 206 aa5.58□□□□□ -1.52
TVP38YKR088C MET12P46151 657 aa5.58□□□□□ -1.52
TVP38YKR088C WHI5Q12416 295 aa5.58□□□□□ -1.52
TVP38YKR088C HIS5P07172 385 aa5.57□□□□□ -1.52
TVP38YKR088C PFK1P16861 987 aaKnown RBP5.57□□□□□ -1.52
TVP38YKR088C DBP5P20449 482 aaKnown RBP5.57□□□□□ -1.52
TVP38YKR088C HRR25P29295 494 aaKnown RBP5.57□□□□□ -1.52
TVP38YKR088C UGA2P38067 497 aa5.57□□□□□ -1.52
TVP38YKR088C YAP3P38749 330 aa5.57□□□□□ -1.52
TVP38YKR088C YGR122WP53272 402 aa5.57□□□□□ -1.52
TVP38YKR088C EAF7P53911 425 aaKnown RBP5.57□□□□□ -1.52
TVP38YKR088C NAB6Q03735 1134 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
TVP38YKR088C BCK1Q01389 1478 aa5.57□□□□□ -1.52
TVP38YKR088C RPP2AP05319 106 aaKnown RBP5.56□□□□□ -1.52
TVP38YKR088C HXT13P39924 564 aa5.56□□□□□ -1.52
TVP38YKR088C ZRG8P40021 1076 aa5.56□□□□□ -1.52
TVP38YKR088C HXT17P53631 564 aa5.56□□□□□ -1.52
TVP38YKR088C HXT15P54854 567 aa5.56□□□□□ -1.52
TVP38YKR088C MRL1Q06815 381 aa5.56□□□□□ -1.52
TVP38YKR088C SNF7P39929 240 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms