RNA–Protein interactions for RNA: YKL197C

PEX1, Transcript of AAA-peroxin, yeast

Gene PEX1, Length 3,132 nt, Biotype protein coding, Subcellular localisation Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX1	YKL197C	PGC1	Q08959	321 aa		3.73	□□□□□ -1.81
PEX1	YKL197C	SEC39	Q12745	709 aa		3.73	□□□□□ -1.81
PEX1	YKL197C	BNR1	P40450	1375 aa		3.73	□□□□□ -1.81
PEX1	YKL197C	ARG81	P05085	880 aa		3.73	□□□□□ -1.81
PEX1	YKL197C	SUV3	P32580	737 aa		3.73	□□□□□ -1.81
PEX1	YKL197C	BMH2	P34730	273 aa	Known RBP	3.73	□□□□□ -1.81
PEX1	YKL197C	RRP1	P35178	278 aa	Predicted RBP	3.73	□□□□□ -1.81
PEX1	YKL197C	MAK5	P38112	773 aa	Predicted RBP	3.73	□□□□□ -1.81
PEX1	YKL197C	RGA1	P39083	1007 aa		3.73	□□□□□ -1.81
PEX1	YKL197C	ACO2	P39533	789 aa		3.73	□□□□□ -1.81
PEX1	YKL197C	EFM5	P53200	248 aa	Known RBP	3.73	□□□□□ -1.81
PEX1	YKL197C	YGR021W	P53212	290 aa		3.73	□□□□□ -1.81
PEX1	YKL197C	NAM8	Q00539	523 aa	Known RBP	3.73	□□□□□ -1.81
PEX1	YKL197C	YML083C	Q04526	418 aa		3.73	□□□□□ -1.81
PEX1	YKL197C	RIO1	Q12196	484 aa	Known RBP	3.73	□□□□□ -1.81
PEX1	YKL197C	SWI5	P08153	709 aa		3.73	□□□□□ -1.81
PEX1	YKL197C	ACE2	P21192	770 aa		3.73	□□□□□ -1.81
PEX1	YKL197C	CDC48	P25694	835 aa	Known RBP	3.73	□□□□□ -1.81
PEX1	YKL197C	ITR1	P30605	584 aa		3.73	□□□□□ -1.81
PEX1	YKL197C	VPH1	P32563	840 aa	Known RBP	3.73	□□□□□ -1.81
PEX1	YKL197C	GRX7	P38068	203 aa		3.73	□□□□□ -1.81
PEX1	YKL197C	BUD6	P41697	788 aa		3.73	□□□□□ -1.81
PEX1	YKL197C	YNL165W	P53891	406 aa		3.73	□□□□□ -1.81
PEX1	YKL197C	SEC5	P89102	971 aa		3.73	□□□□□ -1.81
PEX1	YKL197C	FDC1	Q03034	503 aa		3.73	□□□□□ -1.81
PEX1	YKL197C	FUS2	Q05670	677 aa		3.73	□□□□□ -1.81
PEX1	YKL197C	ESF1	Q06344	628 aa	Known RBP	3.73	□□□□□ -1.81
PEX1	YKL197C	BDS1	Q08347	646 aa		3.73	□□□□□ -1.81
PEX1	YKL197C	NUP192	P47054	1683 aa		3.72	□□□□□ -1.81
PEX1	YKL197C	RAD50	P12753	1312 aa		3.72	□□□□□ -1.81
PEX1	YKL197C	HEM1	P09950	548 aa	Predicted RBP	3.72	□□□□□ -1.81
PEX1	YKL197C	MIP1	P15801	1254 aa		3.72	□□□□□ -1.81
PEX1	YKL197C	RSC6	P25632	483 aa		3.72	□□□□□ -1.81
PEX1	YKL197C	DAL1	P32375	460 aa		3.72	□□□□□ -1.81
PEX1	YKL197C	SPC72	P39723	622 aa		3.72	□□□□□ -1.81
PEX1	YKL197C	AIM9	P40053	627 aa	Known RBP	3.72	□□□□□ -1.81
PEX1	YKL197C	RLP7	P40693	322 aa	Known RBP	3.72	□□□□□ -1.81
PEX1	YKL197C	HGH1	P48362	394 aa	Known RBP	3.72	□□□□□ -1.81
PEX1	YKL197C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	3.72	□□□□□ -1.81	not detected
PEX1	YKL197C	KAR5	Q04746	504 aa		3.72	□□□□□ -1.81
PEX1	YKL197C	RPB2	P08518	1224 aa	Known RBP	3.72	□□□□□ -1.81
PEX1	YKL197C	FUS1	P11710	512 aa		3.72	□□□□□ -1.81
PEX1	YKL197C	PGS1	P25578	521 aa		3.72	□□□□□ -1.81
PEX1	YKL197C	CDC60	P26637	1090 aa	Known RBP	3.72	□□□□□ -1.81
PEX1	YKL197C	PPG1	P32838	368 aa		3.72	□□□□□ -1.81
PEX1	YKL197C	CSE1	P33307	960 aa		3.72	□□□□□ -1.81
PEX1	YKL197C	PEX6	P33760	1030 aa		3.72	□□□□□ -1.81
PEX1	YKL197C	REI1	P38344	393 aa	Predicted RBP	3.72	□□□□□ -1.81
PEX1	YKL197C	CCT3	P39077	534 aa	Known RBP	3.72	□□□□□ -1.81
PEX1	YKL197C	YJL055W	P47044	245 aa		3.72	□□□□□ -1.81
PEX1	YKL197C	SHE10	P53075	577 aa		3.72	□□□□□ -1.81
PEX1	YKL197C	UBP2	Q01476	1272 aa		3.72	□□□□□ -1.81
PEX1	YKL197C	RNT1	Q02555	471 aa		3.72	□□□□□ -1.81
PEX1	YKL197C	MUB1	Q03162	620 aa		3.72	□□□□□ -1.81
PEX1	YKL197C	YMR102C	Q03177	834 aa		3.72	□□□□□ -1.81
PEX1	YKL197C	KRE28	Q04431	385 aa		3.72	□□□□□ -1.81
PEX1	YKL197C	RRN11	Q04712	507 aa		3.72	□□□□□ -1.81
PEX1	YKL197C	TSC13	Q99190	310 aa		3.72	□□□□□ -1.81
PEX1	YKL197C	TOM70	P07213	617 aa	Known RBP	3.71	□□□□□ -1.82
PEX1	YKL197C	VPS35	P34110	944 aa		3.71	□□□□□ -1.82
PEX1	YKL197C	OSH3	P38713	996 aa	Known RBP	3.71	□□□□□ -1.82
PEX1	YKL197C	CTM1	P38818	585 aa		3.71	□□□□□ -1.82
PEX1	YKL197C	YJR142W	P47173	342 aa		3.71	□□□□□ -1.82
PEX1	YKL197C	HOT1	Q03213	719 aa		3.71	□□□□□ -1.82
PEX1	YKL197C	UBX2	Q04228	584 aa		3.71	□□□□□ -1.82
PEX1	YKL197C	YPL277C	Q08989	487 aa		3.71	□□□□□ -1.82
PEX1	YKL197C	RTP1	Q12751	981 aa		3.71	□□□□□ -1.82
PEX1	YKL197C	RGP1	P16664	663 aa		3.71	□□□□□ -1.82
PEX1	YKL197C	MEF1	P25039	761 aa		3.71	□□□□□ -1.82
PEX1	YKL197C	KRE6	P32486	720 aa		3.71	□□□□□ -1.82
PEX1	YKL197C	SLA2	P33338	968 aa		3.71	□□□□□ -1.82
PEX1	YKL197C	PET112	P33893	541 aa		3.71	□□□□□ -1.82
PEX1	YKL197C	TEF4	P36008	412 aa	Known RBP	3.71	□□□□□ -1.82
PEX1	YKL197C	IPL1	P38991	367 aa		3.71	□□□□□ -1.82
PEX1	YKL197C	YGL140C	P53120	1219 aa		3.71	□□□□□ -1.82
PEX1	YKL197C	PEX8	P53248	589 aa		3.71	□□□□□ -1.82
PEX1	YKL197C	CAF130	P53280	1122 aa	Predicted RBP	3.71	□□□□□ -1.82
PEX1	YKL197C	SDA1	P53313	767 aa	Known RBP	3.71	□□□□□ -1.82
PEX1	YKL197C	GCR2	Q01722	534 aa		3.71	□□□□□ -1.82
PEX1	YKL197C	ADA2	Q02336	434 aa		3.71	□□□□□ -1.82
PEX1	YKL197C	VPS60	Q03390	229 aa		3.71	□□□□□ -1.82
PEX1	YKL197C	MDM36	Q06820	579 aa		3.71	□□□□□ -1.82
PEX1	YKL197C	BRX1	Q08235	291 aa	Known RBP	3.71	□□□□□ -1.82
PEX1	YKL197C	DNL4	Q08387	944 aa	Predicted RBP	3.71	□□□□□ -1.82
PEX1	YKL197C	CDC19	P00549	500 aa	Known RBP	3.7	□□□□□ -1.82
PEX1	YKL197C	GAL1	P04385	528 aa		3.7	□□□□□ -1.82
PEX1	YKL197C	ARG82	P07250	355 aa		3.7	□□□□□ -1.82
PEX1	YKL197C	GAL2	P13181	574 aa		3.7	□□□□□ -1.82
PEX1	YKL197C	ASF2	P32448	525 aa	Predicted RBP	3.7	□□□□□ -1.82
PEX1	YKL197C	NUP120	P35729	1037 aa		3.7	□□□□□ -1.82
PEX1	YKL197C	GLY1	P37303	387 aa	Known RBP	3.7	□□□□□ -1.82
PEX1	YKL197C	NOP4	P37838	685 aa	Known RBP	3.7	□□□□□ -1.82
PEX1	YKL197C	SPO1	P53541	631 aa		3.7	□□□□□ -1.82
PEX1	YKL197C	UFO1	Q04511	668 aa		3.7	□□□□□ -1.82
PEX1	YKL197C	DON1	Q05610	365 aa		3.7	□□□□□ -1.82
PEX1	YKL197C	DIB1	Q06819	143 aa	Predicted RBP	3.7	□□□□□ -1.82
PEX1	YKL197C	NOC3	Q07896	663 aa	Predicted RBP	3.7	□□□□□ -1.82
PEX1	YKL197C	USO1	P25386	1790 aa		3.7	□□□□□ -1.82
PEX1	YKL197C	JIP3	O13555	125 aa		3.7	□□□□□ -1.82
PEX1	YKL197C	TFB1	P32776	642 aa		3.7	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 12 ms