RNA–Protein interactions for RNA: YKL139W

CTK1, Transcript of Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK1, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK1YKL139W GYP7P48365 746 aa5.06□□□□□ -1.6
CTK1YKL139W COG6P53959 839 aa5.06□□□□□ -1.6
CTK1YKL139W ATP25Q03153 612 aa5.06□□□□□ -1.6
CTK1YKL139W EAR1Q03212 550 aa5.06□□□□□ -1.6
CTK1YKL139W RCL1Q08096 367 aaPredicted RBP5.06□□□□□ -1.6
CTK1YKL139W GAS5Q08193 484 aa5.06□□□□□ -1.6
CTK1YKL139W COQ4O13525 335 aa5.05□□□□□ -1.6
CTK1YKL139W PER1P25625 357 aa5.05□□□□□ -1.6
CTK1YKL139W SWE1P32944 819 aa5.05□□□□□ -1.6
CTK1YKL139W NPP2P39997 493 aa5.05□□□□□ -1.6
CTK1YKL139W YJR096WP47137 282 aa5.05□□□□□ -1.6
CTK1YKL139W NIT3P49954 291 aa5.05□□□□□ -1.6
CTK1YKL139W SND1Q04007 877 aa5.05□□□□□ -1.6
CTK1YKL139W SLX4Q12098 748 aa5.05□□□□□ -1.6
CTK1YKL139W YLL058WQ12198 575 aa5.05□□□□□ -1.6
CTK1YKL139W TMA7Q3E764 64 aaKnown RBP5.05□□□□□ -1.6
CTK1YKL139W PRP19P32523 503 aaKnown RBP5.04□□□□□ -1.6
CTK1YKL139W MCD4P36051 919 aa5.04□□□□□ -1.6
CTK1YKL139W YKR078WP36158 585 aaKnown RBP5.04□□□□□ -1.6
CTK1YKL139W GIC1P38785 314 aa5.04□□□□□ -1.6
CTK1YKL139W YER158CP40095 573 aa5.04□□□□□ -1.6
CTK1YKL139W MTC3P53077 123 aa5.04□□□□□ -1.6
CTK1YKL139W SUB1P54000 292 aaKnown RBP5.04□□□□□ -1.6
CTK1YKL139W YDR514CQ04408 483 aa5.04□□□□□ -1.6
CTK1YKL139W HPF1Q05164 967 aa5.04□□□□□ -1.6
CTK1YKL139W GUD1Q07729 489 aa5.04□□□□□ -1.6
CTK1YKL139W TRE2Q08693 809 aa5.04□□□□□ -1.6
CTK1YKL139W YOR378WQ08902 515 aa5.04□□□□□ -1.6
CTK1YKL139W DPH6Q12429 685 aa5.04□□□□□ -1.6
CTK1YKL139W CDC48P25694 835 aaKnown RBP5.04□□□□□ -1.6
CTK1YKL139W PCM1P38628 557 aaKnown RBP5.04□□□□□ -1.6
CTK1YKL139W PEX14P53112 341 aa5.04□□□□□ -1.6
CTK1YKL139W SRT1Q03175 343 aa5.04□□□□□ -1.6
CTK1YKL139W MPH2P0CD99 609 aa5.03□□□□□ -1.6
CTK1YKL139W HOG1P32485 435 aa5.03□□□□□ -1.6
CTK1YKL139W CCZ1P38273 704 aa5.03□□□□□ -1.6
CTK1YKL139W PIK1P39104 1066 aa5.03□□□□□ -1.6
CTK1YKL139W BOI2P39969 1040 aa5.03□□□□□ -1.6
CTK1YKL139W AIM14P53109 570 aa5.03□□□□□ -1.6
CTK1YKL139W SFB2P53953 876 aa5.03□□□□□ -1.6
CTK1YKL139W SNP1Q00916 300 aaPredicted RBP5.03□□□□□ -1.6
CTK1YKL139W COG8Q04632 607 aa5.03□□□□□ -1.6
CTK1YKL139W ATG33Q06485 197 aa5.03□□□□□ -1.6
CTK1YKL139W YPR196WQ06595 470 aa5.03□□□□□ -1.6
CTK1YKL139W HMG1P12683 1054 aa5.02□□□□□ -1.61
CTK1YKL139W SFA1P32771 386 aa5.02□□□□□ -1.61
CTK1YKL139W YHL012WP38709 493 aa5.02□□□□□ -1.61
CTK1YKL139W CKB2P38930 258 aa5.02□□□□□ -1.61
CTK1YKL139W DAS1P47005 663 aa5.02□□□□□ -1.61
CTK1YKL139W YKE2P52553 114 aa5.02□□□□□ -1.61
CTK1YKL139W BUD9P53226 547 aa5.02□□□□□ -1.61
CTK1YKL139W YNR014WP53719 212 aa5.02□□□□□ -1.61
CTK1YKL139W FUN30P31380 1131 aa5.01□□□□□ -1.61
CTK1YKL139W PLC1P32383 869 aa5.01□□□□□ -1.61
CTK1YKL139W TFC4P33339 1025 aa5.01□□□□□ -1.61
CTK1YKL139W ICP55P40051 511 aa5.01□□□□□ -1.61
CTK1YKL139W SBE2P42223 864 aaKnown RBP5.01□□□□□ -1.61
CTK1YKL139W TGL2P54857 326 aa5.01□□□□□ -1.61
CTK1YKL139W REH1Q06709 432 aa5.01□□□□□ -1.61
CTK1YKL139W BUD21Q08492 214 aaPredicted RBP5.01□□□□□ -1.61
CTK1YKL139W GUP2Q08929 609 aa5.01□□□□□ -1.61
CTK1YKL139W YTM1Q12024 460 aaPredicted RBP5.01□□□□□ -1.61
CTK1YKL139W NYV1Q12255 253 aa5.01□□□□□ -1.61
CTK1YKL139W GIN4Q12263 1142 aa5.01□□□□□ -1.61
CTK1YKL139W SAM35P14693 329 aa5□□□□□ -1.61
CTK1YKL139W ACE2P21192 770 aa5□□□□□ -1.61
CTK1YKL139W RSC6P25632 483 aa5□□□□□ -1.61
CTK1YKL139W HIR1P32479 840 aa5□□□□□ -1.61
CTK1YKL139W OAF1P39720 1047 aaPredicted RBP5□□□□□ -1.61
CTK1YKL139W LSB3P43603 459 aaKnown RBP5□□□□□ -1.61
CTK1YKL139W TAD1P53065 400 aa5□□□□□ -1.61
CTK1YKL139W YNL034WP53963 612 aa5□□□□□ -1.61
CTK1YKL139W YNL018CP53976 612 aa5□□□□□ -1.61
CTK1YKL139W PUS1Q12211 544 aaKnown RBP5□□□□□ -1.61
CTK1YKL139W YVC1Q12324 675 aa5□□□□□ -1.61
CTK1YKL139W MPD2Q99316 277 aa5□□□□□ -1.61
CTK1YKL139W DAL7P21826 554 aa4.99□□□□□ -1.61
CTK1YKL139W RRT14P40470 206 aa4.99□□□□□ -1.61
CTK1YKL139W ALY2P47029 1046 aa4.99□□□□□ -1.61
CTK1YKL139W JSN1P47135 1091 aaKnown RBP RIP-Chip data4.99□□□□□ -1.61not detected
CTK1YKL139W NHX1Q04121 633 aa4.99□□□□□ -1.61
CTK1YKL139W RSB1Q08417 382 aa4.99□□□□□ -1.61
CTK1YKL139W AI3P03877 415 aa4.99□□□□□ -1.61
CTK1YKL139W ATP4P05626 244 aa4.99□□□□□ -1.61
CTK1YKL139W RFA1P22336 621 aaKnown RBP4.99□□□□□ -1.61
CTK1YKL139W SRO9P25567 434 aaKnown RBP4.99□□□□□ -1.61
CTK1YKL139W WHI3P34761 661 aaKnown RBP4.99□□□□□ -1.61
CTK1YKL139W RPN10P38886 268 aaKnown RBP4.99□□□□□ -1.61
CTK1YKL139W PEA2P40091 420 aa4.99□□□□□ -1.61
CTK1YKL139W GZF3P42944 551 aaKnown RBP4.99□□□□□ -1.61
CTK1YKL139W HXT16P47185 567 aa4.99□□□□□ -1.61
CTK1YKL139W HFM1P51979 1187 aa4.99□□□□□ -1.61
CTK1YKL139W SDH1Q00711 640 aa4.99□□□□□ -1.61
CTK1YKL139W LRS4Q04087 347 aaKnown RBP4.99□□□□□ -1.61
CTK1YKL139W YDR338CQ05497 695 aa4.99□□□□□ -1.61
CTK1YKL139W OSW2Q12202 724 aa4.99□□□□□ -1.61
CTK1YKL139W KAR1P11927 433 aa4.98□□□□□ -1.61
CTK1YKL139W YEF3P16521 1044 aaKnown RBP4.98□□□□□ -1.61
CTK1YKL139W YCL002CP25565 263 aa4.98□□□□□ -1.61
CTK1YKL139W PWP2P25635 923 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms